Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0352.Seq
         (449 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE013599-1807|AAF58309.1|  346|Drosophila melanogaster CG6704-PA...    50   2e-06
AY060679-1|AAL28227.1|  338|Drosophila melanogaster GH11818p pro...    48   4e-06
AE013599-3656|AAF47039.2|  364|Drosophila melanogaster CG5428-PA...    48   4e-06
BT012452-1|AAS93723.1|  318|Drosophila melanogaster RE64763p pro...    47   1e-05
AY119624-1|AAM50278.1|  291|Drosophila melanogaster LP01553p pro...    47   1e-05
AE013599-3657|AAF47040.2|  331|Drosophila melanogaster CG5431-PA...    47   1e-05
AE014297-888|AAF54344.1|  316|Drosophila melanogaster CG16733-PA...    42   4e-04
AE014298-2410|ABC67186.1|  139|Drosophila melanogaster CG34015-P...    27   8.8  

>AE013599-1807|AAF58309.1|  346|Drosophila melanogaster CG6704-PA
           protein.
          Length = 346

 Score = 49.6 bits (113), Expect = 2e-06
 Identities = 27/64 (42%), Positives = 35/64 (54%)
 Frame = -3

Query: 447 HVKEAWDLXNHPNMLFLXYEEXKQDLXGTIKRIANFFNKTYTDEQISGLCKHVHIDNFRN 268
           HVKEA +  +  N+LFL YE+   DL G I  IA+F       E +  L  H+ I +FR 
Sbjct: 226 HVKEAREHAHLSNVLFLRYEDMLADLPGAINSIASFLECPPKPEDMDRLLDHLSIRSFRE 285

Query: 267 NDSV 256
           N SV
Sbjct: 286 NKSV 289


>AY060679-1|AAL28227.1|  338|Drosophila melanogaster GH11818p
           protein.
          Length = 338

 Score = 48.4 bits (110), Expect = 4e-06
 Identities = 18/61 (29%), Positives = 33/61 (54%)
 Frame = -3

Query: 447 HVKEAWDLXNHPNMLFLXYEEXKQDLXGTIKRIANFFNKTYTDEQISGLCKHVHIDNFRN 268
           H+ + W L + PN+ F  YE  K  L   I  +A F  ++ + EQ+  + +H+  ++ R+
Sbjct: 205 HILDFWQLRHEPNIFFTSYERMKGQLGQVISEVAQFLERSVSQEQMQQMQRHLSFESMRD 264

Query: 267 N 265
           N
Sbjct: 265 N 265


>AE013599-3656|AAF47039.2|  364|Drosophila melanogaster CG5428-PA
           protein.
          Length = 364

 Score = 48.4 bits (110), Expect = 4e-06
 Identities = 18/61 (29%), Positives = 33/61 (54%)
 Frame = -3

Query: 447 HVKEAWDLXNHPNMLFLXYEEXKQDLXGTIKRIANFFNKTYTDEQISGLCKHVHIDNFRN 268
           H+ + W L + PN+ F  YE  K  L   I  +A F  ++ + EQ+  + +H+  ++ R+
Sbjct: 231 HILDFWQLRHEPNIFFTSYERMKGQLGQVISEVAQFLERSVSQEQMQQMQRHLSFESMRD 290

Query: 267 N 265
           N
Sbjct: 291 N 291


>BT012452-1|AAS93723.1|  318|Drosophila melanogaster RE64763p
           protein.
          Length = 318

 Score = 47.2 bits (107), Expect = 1e-05
 Identities = 20/61 (32%), Positives = 31/61 (50%)
 Frame = -3

Query: 447 HVKEAWDLXNHPNMLFLXYEEXKQDLXGTIKRIANFFNKTYTDEQISGLCKHVHIDNFRN 268
           H  E + L N P + +  +E  K+DL G I  ++ F NK   D+Q+  L KH+     + 
Sbjct: 189 HAHEFYQLRNEPWVFYTSFEMMKKDLRGVINDVSRFLNKPINDQQMEKLLKHLSFAEMKK 248

Query: 267 N 265
           N
Sbjct: 249 N 249


>AY119624-1|AAM50278.1|  291|Drosophila melanogaster LP01553p
           protein.
          Length = 291

 Score = 47.2 bits (107), Expect = 1e-05
 Identities = 20/61 (32%), Positives = 31/61 (50%)
 Frame = -3

Query: 447 HVKEAWDLXNHPNMLFLXYEEXKQDLXGTIKRIANFFNKTYTDEQISGLCKHVHIDNFRN 268
           H  E + L N P + +  +E  K+DL G I  ++ F NK   D+Q+  L KH+     + 
Sbjct: 144 HAHEFYQLRNEPWVFYTSFEMMKKDLRGVINDVSRFLNKPINDQQMEKLLKHLSFAEMKK 203

Query: 267 N 265
           N
Sbjct: 204 N 204


>AE013599-3657|AAF47040.2|  331|Drosophila melanogaster CG5431-PA
           protein.
          Length = 331

 Score = 47.2 bits (107), Expect = 1e-05
 Identities = 20/61 (32%), Positives = 31/61 (50%)
 Frame = -3

Query: 447 HVKEAWDLXNHPNMLFLXYEEXKQDLXGTIKRIANFFNKTYTDEQISGLCKHVHIDNFRN 268
           H  E + L N P + +  +E  K+DL G I  ++ F NK   D+Q+  L KH+     + 
Sbjct: 184 HAHEFYQLRNEPWVFYTSFEMMKKDLRGVINDVSRFLNKPINDQQMEKLLKHLSFAEMKK 243

Query: 267 N 265
           N
Sbjct: 244 N 244


>AE014297-888|AAF54344.1|  316|Drosophila melanogaster CG16733-PA
           protein.
          Length = 316

 Score = 41.9 bits (94), Expect = 4e-04
 Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
 Frame = -2

Query: 292 CSHR*FQK**LGHVNFLSKVDGLIP-GEEPFIRKGKVGGWRDYFDEEMTKECERWMAKKV 116
           C H  F K      N    ++ L+P     FIR GK+G WR++   EM++  + W  + +
Sbjct: 250 CDHLTFDK---MRANKAVNLEKLLPESSSKFIRNGKIGDWRNHMGNEMSERFDEWTERHM 306

Query: 115 EETGIQF 95
             +G+ F
Sbjct: 307 RGSGLNF 313



 Score = 40.7 bits (91), Expect = 9e-04
 Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
 Frame = -3

Query: 447 HVKEAWDLXNHPNMLFLXYEEXKQDLXGTIKRIANFFN-KTYTD-EQISGLCKHVHIDNF 274
           HV   W      N+LF+ YE+  +DL   ++R A F   ++  D   +  LC H+  D  
Sbjct: 199 HVLPFWKRSQDDNVLFIKYEDMVKDLPSVVRRCARFLGVQSLLDVSTLQKLCDHLTFDKM 258

Query: 273 RNNDSV 256
           R N +V
Sbjct: 259 RANKAV 264


>AE014298-2410|ABC67186.1|  139|Drosophila melanogaster CG34015-PA
           protein.
          Length = 139

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 14/41 (34%), Positives = 20/41 (48%), Gaps = 3/41 (7%)
 Frame = +2

Query: 122 FGHPSFALLSHLLIEVIAPATDFSFPYKWFFS---WY*TID 235
           F  P F  + HL +  I+P T  +F  K  F    W+ T+D
Sbjct: 89  FHLPPFITVKHLHMHAISPRTQMTFLSKMIFRPSVWFKTVD 129


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,130,949
Number of Sequences: 53049
Number of extensions: 330646
Number of successful extensions: 696
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 689
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 696
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1455824790
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)