Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0349.Seq
         (598 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-424|AAF47622.2| 1076|Drosophila melanogaster CG32301-PA...    29   3.6  
BT029687-1|ABL75744.1|  486|Drosophila melanogaster IP17403p pro...    28   8.4  
AY089368-1|AAL90106.1|  447|Drosophila melanogaster AT19096p pro...    28   8.4  
AY052085-1|AAK93509.1|  403|Drosophila melanogaster SD03655p pro...    28   8.4  
AE014296-291|AAN11491.1|  403|Drosophila melanogaster CG12004-PB...    28   8.4  
AE014296-290|AAF47516.2|  403|Drosophila melanogaster CG12004-PA...    28   8.4  
AE014134-3272|AAF53915.2|  448|Drosophila melanogaster CG9316-PA...    28   8.4  

>AE014296-424|AAF47622.2| 1076|Drosophila melanogaster CG32301-PA
           protein.
          Length = 1076

 Score = 29.5 bits (63), Expect = 3.6
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = +1

Query: 226 FLMFLNTYLQFQSRIKEYFFYNSTLARYNVL 318
           +L FLN    F SR +EY   +  L+RY V+
Sbjct: 195 YLFFLNMLCMFLSRFQEYNMRSGILSRYQVV 225


>BT029687-1|ABL75744.1|  486|Drosophila melanogaster IP17403p
           protein.
          Length = 486

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 11/35 (31%), Positives = 22/35 (62%)
 Frame = -1

Query: 436 YFYAIKACWQALSC*SLINLDYIYQGTEGML*NKI 332
           YF+ ++ C++A    + ++L Y Y G EG + ++I
Sbjct: 130 YFFTVRDCYEAFVIYNFLSLCYEYLGGEGNIMSEI 164


>AY089368-1|AAL90106.1|  447|Drosophila melanogaster AT19096p
           protein.
          Length = 447

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 13/38 (34%), Positives = 21/38 (55%)
 Frame = -1

Query: 262 FEIVNMCLKTLKMCGFHDF*INQMLSIIIYWFNLEFGL 149
           FE+VN C     +CGF +     +L   + W ++EFG+
Sbjct: 188 FELVNGCYTGQNLCGFPNL-KTLVLRDCLLWNSMEFGI 224


>AY052085-1|AAK93509.1|  403|Drosophila melanogaster SD03655p
           protein.
          Length = 403

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 11/35 (31%), Positives = 22/35 (62%)
 Frame = -1

Query: 436 YFYAIKACWQALSC*SLINLDYIYQGTEGML*NKI 332
           YF+ ++ C++A    + ++L Y Y G EG + ++I
Sbjct: 130 YFFTVRDCYEAFVIYNFLSLCYEYLGGEGNIMSEI 164


>AE014296-291|AAN11491.1|  403|Drosophila melanogaster CG12004-PB,
           isoform B protein.
          Length = 403

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 11/35 (31%), Positives = 22/35 (62%)
 Frame = -1

Query: 436 YFYAIKACWQALSC*SLINLDYIYQGTEGML*NKI 332
           YF+ ++ C++A    + ++L Y Y G EG + ++I
Sbjct: 130 YFFTVRDCYEAFVIYNFLSLCYEYLGGEGNIMSEI 164


>AE014296-290|AAF47516.2|  403|Drosophila melanogaster CG12004-PA,
           isoform A protein.
          Length = 403

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 11/35 (31%), Positives = 22/35 (62%)
 Frame = -1

Query: 436 YFYAIKACWQALSC*SLINLDYIYQGTEGML*NKI 332
           YF+ ++ C++A    + ++L Y Y G EG + ++I
Sbjct: 130 YFFTVRDCYEAFVIYNFLSLCYEYLGGEGNIMSEI 164


>AE014134-3272|AAF53915.2|  448|Drosophila melanogaster CG9316-PA
           protein.
          Length = 448

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 13/38 (34%), Positives = 21/38 (55%)
 Frame = -1

Query: 262 FEIVNMCLKTLKMCGFHDF*INQMLSIIIYWFNLEFGL 149
           FE+VN C     +CGF +     +L   + W ++EFG+
Sbjct: 190 FELVNGCYTGQNLCGFPNL-KTLVLRDCLLWNSMEFGI 226


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,450,283
Number of Sequences: 53049
Number of extensions: 385880
Number of successful extensions: 528
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 521
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 528
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2420893683
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)