Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0348.Seq
         (598 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    26   0.21 
AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory recept...    22   3.4  
AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory recept...    22   3.4  
AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory recept...    22   3.4  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    22   3.4  
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           22   4.5  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   7.9  

>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 26.2 bits (55), Expect = 0.21
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = +2

Query: 167 GFWWWNRRKSGSGHKSATVQSSTTDKTSTAVP 262
           GF  W +   G+   S+T  S  T +TST+ P
Sbjct: 63  GFHPWKKSPQGAPSPSSTPSSLPTQRTSTSNP 94



 Score = 21.0 bits (42), Expect = 7.9
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = +3

Query: 153 RHLKTVSGGGIEGNQD 200
           +H+KT +G G +G+ D
Sbjct: 392 KHVKTHNGNGKKGSSD 407


>AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory receptor
           candidate 47 protein.
          Length = 387

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = +2

Query: 434 YAFASKTYSIFLTIXVRISVFNTT 505
           YA    TYS+F+   + ++V+  T
Sbjct: 245 YARTYSTYSLFMMANITVAVYGFT 268


>AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory receptor
           candidate 26 protein.
          Length = 387

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = +2

Query: 434 YAFASKTYSIFLTIXVRISVFNTT 505
           YA    TYS+F+   + ++V+  T
Sbjct: 245 YARTYSTYSLFMMANITVAVYGFT 268


>AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory receptor
           candidate 6 protein.
          Length = 387

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = +2

Query: 434 YAFASKTYSIFLTIXVRISVFNTT 505
           YA    TYS+F+   + ++V+  T
Sbjct: 245 YARTYSTYSLFMMANITVAVYGFT 268


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
          protein.
          Length = 351

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 6/7 (85%), Positives = 6/7 (85%)
 Frame = -3

Query: 71 HHGYWNY 51
          HHG WNY
Sbjct: 72 HHGQWNY 78


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 11/18 (61%), Positives = 12/18 (66%)
 Frame = +2

Query: 227 SSTTDKTSTAVPAAPIPP 280
           SSTT  TS AV A+P  P
Sbjct: 105 SSTTSATSGAVMASPPMP 122


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 9/22 (40%), Positives = 9/22 (40%)
 Frame = +2

Query: 230  STTDKTSTAVPAAPIPPQARPG 295
            S  D T    P  P PPQ   G
Sbjct: 999  SREDCTKPPEPVTPAPPQVTTG 1020


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 120,440
Number of Sequences: 336
Number of extensions: 2628
Number of successful extensions: 12
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15039504
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)