Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0348.Seq
(598 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_04_0029 - 16610182-16611753 34 0.099
04_04_0844 - 28637393-28638118,28638206-28638283,28638431-286386... 32 0.40
04_04_0758 - 27826787-27828178 32 0.40
04_04_0757 - 27822139-27823530 32 0.40
09_02_0057 - 3697255-3698116,3698191-3698351,3698442-3698636,369... 31 0.70
08_02_0225 + 14469037-14469064,14470004-14470215,14470324-144704... 31 0.70
06_01_0062 - 529833-530917,531392-531434 30 1.2
05_05_0033 + 21737075-21737721,21737819-21738134,21738463-21739722 30 1.2
03_02_0901 + 12267042-12267182,12267949-12268095,12268163-122682... 30 1.2
12_02_0305 - 17235832-17236379,17237345-17237444 30 1.6
10_07_0086 - 12755485-12756540,12756994-12757283,12757391-12757643 30 1.6
04_01_0120 + 1241241-1241321,1242827-1242857,1242999-1243612,124... 30 1.6
12_01_0849 + 7948693-7948996,7949829-7950610 25 2.1
07_01_0805 + 6295448-6296264,6296362-6297479,6297565-6298467 29 2.1
04_04_0872 + 28903099-28903644,28903739-28904544,28904620-28905004 29 2.1
05_01_0364 + 2855760-2855801,2855940-2856015,2856759-2857747 29 2.8
07_03_1090 + 23891294-23892222,23892317-23892516,23895241-238954... 29 3.7
06_01_0216 - 1641914-1642381,1642471-1642725 29 3.7
12_02_0035 - 12563503-12564405,12564494-12565611,12565709-125662... 28 4.9
10_08_0989 + 22069244-22071679 28 4.9
08_02_0516 + 18080706-18080760,18081796-18081885,18082479-180825... 28 4.9
07_01_0313 + 2216498-2216953 28 4.9
05_04_0347 + 20479682-20479753,20480136-20480813,20481143-204821... 28 4.9
02_03_0367 + 18220099-18220905 28 4.9
01_06_1575 + 38339970-38340786,38340884-38342001,38342099-38343055 28 4.9
12_02_0585 + 20824752-20825954,20826141-20826329,20826533-208266... 28 6.5
08_02_1178 + 24958623-24959894 28 6.5
06_03_1183 + 28237467-28237612,28238035-28238089,28238216-282383... 28 6.5
03_05_1002 - 29594462-29594581,29594686-29594781,29594857-295949... 28 6.5
03_05_0032 + 20043252-20044361 28 6.5
02_05_1327 - 35718908-35719270,35719537-35719953,35720183-35720557 28 6.5
02_05_0075 - 25610386-25610508,25610529-25610583,25610801-256112... 28 6.5
02_02_0369 - 9505330-9505652,9507262-9507532,9507649-9507690,950... 28 6.5
02_01_0163 + 1135592-1135623,1135718-1135816,1135904-1135960,113... 28 6.5
10_08_0383 - 17424194-17425567 27 8.6
08_02_0251 - 14776308-14776495,14777624-14777708,14779125-147791... 27 8.6
08_01_0627 + 5451140-5451839,5452635-5452662,5452730-5452786,545... 27 8.6
04_03_0823 - 20073972-20074343,20074432-20074657,20074753-20075126 27 8.6
02_02_0240 + 8196140-8198248,8198381-8198650 27 8.6
02_01_0348 - 2506007-2506909,2507003-2508120,2508230-2508883,250... 27 8.6
02_01_0029 - 176002-176137,176495-176646,177166-177577,178010-17... 27 8.6
>03_04_0029 - 16610182-16611753
Length = 523
Score = 33.9 bits (74), Expect = 0.099
Identities = 15/45 (33%), Positives = 19/45 (42%)
Frame = +2
Query: 173 WWWNRRKSGSGHKSATVQSSTTDKTSTAVPAAPIPPQARPGQAQP 307
WWW + +V + T STA PAA P A P + P
Sbjct: 45 WWWAASPAAQQDDIGSVVAQTLSPPSTAAPAAASPSIASPAASSP 89
>04_04_0844 -
28637393-28638118,28638206-28638283,28638431-28638607,
28639124-28639537
Length = 464
Score = 31.9 bits (69), Expect = 0.40
Identities = 20/61 (32%), Positives = 31/61 (50%)
Frame = +2
Query: 182 NRRKSGSGHKSATVQSSTTDKTSTAVPAAPIPPQARPGQAQPLQAVLLPRAVQVHRTLPP 361
+RR+SGS H ++ S T+++ S + P P AQ Q+V P +V + L P
Sbjct: 278 SRRRSGSHHHHSSCSSMTSEQKSRSYATMPESPSKDSTTAQ--QSVPSPPSVGMAEALSP 335
Query: 362 L 364
L
Sbjct: 336 L 336
>04_04_0758 - 27826787-27828178
Length = 463
Score = 31.9 bits (69), Expect = 0.40
Identities = 16/41 (39%), Positives = 18/41 (43%)
Frame = +2
Query: 248 STAVPAAPIPPQARPGQAQPLQAVLLPRAVQVHRTLPPLRL 370
S AV A P P Q Q L +L R + VH PP L
Sbjct: 8 SVAVVAVPFPAQGHLNQLMHLSLLLASRGLDVHYAAPPAHL 48
>04_04_0757 - 27822139-27823530
Length = 463
Score = 31.9 bits (69), Expect = 0.40
Identities = 16/41 (39%), Positives = 18/41 (43%)
Frame = +2
Query: 248 STAVPAAPIPPQARPGQAQPLQAVLLPRAVQVHRTLPPLRL 370
S AV A P P Q Q L +L R + VH PP L
Sbjct: 8 SVAVVAVPFPAQGHLNQLMHLSLLLASRGLDVHYAAPPAHL 48
>09_02_0057 -
3697255-3698116,3698191-3698351,3698442-3698636,
3698728-3699126,3699208-3699477,3700102-3700695
Length = 826
Score = 31.1 bits (67), Expect = 0.70
Identities = 21/71 (29%), Positives = 29/71 (40%), Gaps = 1/71 (1%)
Frame = +3
Query: 105 VEELLPAQRQPPKATPRHLKTVSGGGIEGNQDPVTKA-LPYSHPQPIRRAPQCQQHRFHL 281
VE A R+ P + R K GGG E + + +A P P P+ ++ RF
Sbjct: 104 VERRDSADREAPPPSSRKRKGHEGGGNESDPEGGKRARASVEPPPPKEERPRRERRRFED 163
Query: 282 KHVRGKHNHFR 314
GKH R
Sbjct: 164 ADANGKHGDER 174
>08_02_0225 +
14469037-14469064,14470004-14470215,14470324-14470433,
14470498-14470765,14470878-14471087,14471162-14471230,
14473346-14473591,14473672-14473740,14473808-14473871,
14474468-14474583
Length = 463
Score = 31.1 bits (67), Expect = 0.70
Identities = 16/60 (26%), Positives = 28/60 (46%)
Frame = +2
Query: 182 NRRKSGSGHKSATVQSSTTDKTSTAVPAAPIPPQARPGQAQPLQAVLLPRAVQVHRTLPP 361
N ++S S T + KTS ++P+A +P + +Q L A + P + + PP
Sbjct: 138 NAQRSHDRVPSPTTSARKRQKTSQSIPSASVPVPSPAVHSQTLTAPMQPLSSATKKVAPP 197
>06_01_0062 - 529833-530917,531392-531434
Length = 375
Score = 30.3 bits (65), Expect = 1.2
Identities = 23/77 (29%), Positives = 33/77 (42%), Gaps = 5/77 (6%)
Frame = +3
Query: 126 QRQPPKATPRHLKTVSGGGIEGNQDPVT-KALPYSH----PQPIRRAPQCQQHRFHLKHV 290
QR PP PR + V G EGN D +P PQ R A C + HL
Sbjct: 81 QRYPPPPRPRRIVLVRHGESEGNVDEAAYTRVPDPRIGLTPQGWRDAEDCGRRLRHLLST 140
Query: 291 RGKHNHFRQFFYLGRFK 341
G + ++ +FY+ ++
Sbjct: 141 -GGGDDWKVYFYVSPYR 156
>05_05_0033 + 21737075-21737721,21737819-21738134,21738463-21739722
Length = 740
Score = 30.3 bits (65), Expect = 1.2
Identities = 15/35 (42%), Positives = 21/35 (60%)
Frame = +3
Query: 225 SHPQPIRRAPQCQQHRFHLKHVRGKHNHFRQFFYL 329
SH RR Q QQ + +H+R +H+H R +FYL
Sbjct: 160 SHESQRRR--QQQQQQLKGRHLRPRHSHRRGYFYL 192
>03_02_0901 + 12267042-12267182,12267949-12268095,12268163-12268253,
12268367-12268485,12268779-12268969,12269440-12269650,
12270072-12270309,12270944-12271329,12271933-12271956,
12271984-12272077,12272341-12272525,12273025-12273255,
12273665-12273730,12273816-12274034,12274764-12275003,
12275244-12275423,12276269-12276535,12276612-12276815,
12276896-12277048
Length = 1128
Score = 30.3 bits (65), Expect = 1.2
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = +3
Query: 81 HPPTVPAQVEELLPAQRQPPKATPRHLKT 167
+P +PA+++ LLP + PK TP+H KT
Sbjct: 1020 NPIEIPAKLQHLLPF-KSKPKDTPKHRKT 1047
>12_02_0305 - 17235832-17236379,17237345-17237444
Length = 215
Score = 29.9 bits (64), Expect = 1.6
Identities = 18/58 (31%), Positives = 25/58 (43%)
Frame = +3
Query: 6 PRKNPPRPLVAALKDIVPVAMMEA*HPPTVPAQVEELLPAQRQPPKATPRHLKTVSGG 179
PR+NPPR + + P +E P + ++ A QPP P T SGG
Sbjct: 74 PRRNPPRAPPSPRRASPPSVSVEPTPAPVIAPSPPPVV-APSQPPTIAPTQPPTPSGG 130
>10_07_0086 - 12755485-12756540,12756994-12757283,12757391-12757643
Length = 532
Score = 29.9 bits (64), Expect = 1.6
Identities = 17/58 (29%), Positives = 24/58 (41%)
Frame = +2
Query: 212 SATVQSSTTDKTSTAVPAAPIPPQARPGQAQPLQAVLLPRAVQVHRTLPPLRLVFPGV 385
S+T + ST+ P P+P A P A PL + LP + L PG+
Sbjct: 209 SSTDEPSTSSALPPPTPPRPLPDMAGPSSATPLLPLQLPGLAGSSSAMSLPALQLPGM 266
Score = 28.7 bits (61), Expect = 3.7
Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 3/51 (5%)
Frame = +2
Query: 185 RRKSGSGHKSATVQSSTTDK--TSTAVPAAPIPPQARPGQAQPLQAV-LLP 328
+RK + +S+TD+ TS+A+P P PP+ P A P A LLP
Sbjct: 194 KRKEDEEPSNTAAAASSTDEPSTSSALPP-PTPPRPLPDMAGPSSATPLLP 243
>04_01_0120 +
1241241-1241321,1242827-1242857,1242999-1243612,
1243726-1243796,1244233-1244478,1245267-1245393,
1245993-1246185,1246656-1247209
Length = 638
Score = 29.9 bits (64), Expect = 1.6
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = +3
Query: 69 MEA*HPPTVPAQVEELLPAQRQPPKATPRHLKTVSGGGI 185
ME PP +P Q+ + P+ P +ATP L GGI
Sbjct: 1 MELRSPPPLPDQLGQPPPSPVPPARATPNGLNCRDSGGI 39
>12_01_0849 + 7948693-7948996,7949829-7950610
Length = 361
Score = 24.6 bits (51), Expect(2) = 2.1
Identities = 14/43 (32%), Positives = 18/43 (41%)
Frame = +3
Query: 219 PYSHPQPIRRAPQCQQHRFHLKHVRGKHNHFRQFFYLGRFKYI 347
P S P P+RR C R H R + +R GR +I
Sbjct: 146 PASQPPPLRRPALCCPWRPLEVHPRRQQWRYRHCSVFGRLLFI 188
Score = 23.4 bits (48), Expect(2) = 2.1
Identities = 10/29 (34%), Positives = 14/29 (48%)
Frame = +3
Query: 63 AMMEA*HPPTVPAQVEELLPAQRQPPKAT 149
+ + A HPP P + E A PP A+
Sbjct: 120 SFLHAGHPPAAPTALPERRSAVPAPPPAS 148
>07_01_0805 + 6295448-6296264,6296362-6297479,6297565-6298467
Length = 945
Score = 29.5 bits (63), Expect = 2.1
Identities = 16/54 (29%), Positives = 26/54 (48%)
Frame = +3
Query: 84 PPTVPAQVEELLPAQRQPPKATPRHLKTVSGGGIEGNQDPVTKALPYSHPQPIR 245
PPTV A ++ A PP+ + + ++ V E ++D + L H PIR
Sbjct: 405 PPTVLADLKRKKTASSPPPEPSSKRVQLVIDSDEELDEDDIRIDLSAIHVTPIR 458
>04_04_0872 + 28903099-28903644,28903739-28904544,28904620-28905004
Length = 578
Score = 29.5 bits (63), Expect = 2.1
Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Frame = +3
Query: 114 LLPAQ-RQPPKATPRHLKTVSGGGIEGNQDPVTKALPYSHPQPIRRAPQCQQHR 272
LLP++ R+P P H++ S G +G +DP+ K++P R P+ + R
Sbjct: 130 LLPSRIREPDLELPPHVEGPSVGR-QGGEDPLNKSVPAGRYFAALRGPELDEVR 182
>05_01_0364 + 2855760-2855801,2855940-2856015,2856759-2857747
Length = 368
Score = 29.1 bits (62), Expect = 2.8
Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Frame = +2
Query: 194 SGSGHKSATVQSSTTDKTSTAVPAAP--IPPQARPGQAQPLQAV 319
+G+G+ +A ++T D V A+P P + PG A PL V
Sbjct: 235 NGNGNAAAAAANATGDGAGAVVEASPQDAPTKPSPGNAGPLAVV 278
>07_03_1090 +
23891294-23892222,23892317-23892516,23895241-23895482,
23895771-23896461,23896486-23896562
Length = 712
Score = 28.7 bits (61), Expect = 3.7
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +2
Query: 200 SGHKSATVQSSTTDKTSTAVPAAPIPPQARP 292
S +T Q ST ++T+ AAP PPQ P
Sbjct: 188 SSFSRSTSQHSTLEQTAMPPMAAPAPPQTNP 218
>06_01_0216 - 1641914-1642381,1642471-1642725
Length = 240
Score = 28.7 bits (61), Expect = 3.7
Identities = 16/53 (30%), Positives = 23/53 (43%)
Frame = +3
Query: 9 RKNPPRPLVAALKDIVPVAMMEA*HPPTVPAQVEELLPAQRQPPKATPRHLKT 167
RK PRP AA K A + PP PA+ + A P P+ +++
Sbjct: 177 RKRTPRPSAAAAKKPASSAEAKKAVPPARPARAKRARKAAPAKPMQPPKSIRS 229
>12_02_0035 -
12563503-12564405,12564494-12565611,12565709-12566239,
12566337-12567153
Length = 1122
Score = 28.3 bits (60), Expect = 4.9
Identities = 15/54 (27%), Positives = 26/54 (48%)
Frame = +3
Query: 84 PPTVPAQVEELLPAQRQPPKATPRHLKTVSGGGIEGNQDPVTKALPYSHPQPIR 245
PPTV A ++ A PP+ + + ++ V + ++D + L H PIR
Sbjct: 582 PPTVLADLKRKKTASSPPPEPSSKRVQLVIDSDEDLDEDDIRIDLSAIHVTPIR 635
>10_08_0989 + 22069244-22071679
Length = 811
Score = 28.3 bits (60), Expect = 4.9
Identities = 21/89 (23%), Positives = 35/89 (39%)
Frame = +3
Query: 81 HPPTVPAQVEELLPAQRQPPKATPRHLKTVSGGGIEGNQDPVTKALPYSHPQPIRRAPQC 260
HP P VE Q PP+ HL+ G V + ++ QC
Sbjct: 42 HPVPTPV-VEATNEEQDAPPEYDADHLQYDPGLRSPIASYDVNEQDAVRRAYILKGPNQC 100
Query: 261 QQHRFHLKHVRGKHNHFRQFFYLGRFKYI 347
H F ++ + GK HF F + +++++
Sbjct: 101 YAHDFPVREIYGKKRHF-NFVWFHKYQWL 128
>08_02_0516 +
18080706-18080760,18081796-18081885,18082479-18082573,
18083658-18083726,18083812-18084393
Length = 296
Score = 28.3 bits (60), Expect = 4.9
Identities = 19/47 (40%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = +2
Query: 224 QSSTTDKTSTAV-PAAPIPPQARPGQAQPLQAVLLPRAVQVHRTLPP 361
QS T + V P PPQ +P Q Q LQ LP+ +Q LPP
Sbjct: 196 QSQQTPQPQPQVHPQPQQPPQLQP-QPQLLQQPQLPQQLQPQSQLPP 241
>07_01_0313 + 2216498-2216953
Length = 151
Score = 28.3 bits (60), Expect = 4.9
Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = +2
Query: 200 SGHKSATVQSSTTDKTSTAVPAAPIPPQARPGQAQPLQAVLLPRAVQVHR-TLPPL 364
+GH +A + TT+ + A+PA P P +P + AV LP V + TLPP+
Sbjct: 25 TGH-AARHLADTTEAPAAAIPAVPAMP--KPTIPTIVPAVTLPPIPAVPKVTLPPM 77
>05_04_0347 +
20479682-20479753,20480136-20480813,20481143-20482195,
20482345-20482406,20482491-20482541,20482635-20482719,
20483253-20483342,20483472-20483563,20483704-20483728
Length = 735
Score = 28.3 bits (60), Expect = 4.9
Identities = 15/37 (40%), Positives = 17/37 (45%)
Frame = +2
Query: 188 RKSGSGHKSATVQSSTTDKTSTAVPAAPIPPQARPGQ 298
R S KSAT + + KT P P PP RP Q
Sbjct: 674 RSQISSSKSATPAQTRSIKTRAPNPPPPPPPPRRPSQ 710
>02_03_0367 + 18220099-18220905
Length = 268
Score = 28.3 bits (60), Expect = 4.9
Identities = 18/63 (28%), Positives = 28/63 (44%)
Frame = +2
Query: 191 KSGSGHKSATVQSSTTDKTSTAVPAAPIPPQARPGQAQPLQAVLLPRAVQVHRTLPPLRL 370
+S + S++ + K P +P+ P+ P Q QP Q A +VH PP
Sbjct: 133 ESSAPPSSSSSKRRDKGKRRPPPPPSPMSPKVTPAQQQPPQP-----AEKVHDASPPPSS 187
Query: 371 VFP 379
+FP
Sbjct: 188 LFP 190
>01_06_1575 + 38339970-38340786,38340884-38342001,38342099-38343055
Length = 963
Score = 28.3 bits (60), Expect = 4.9
Identities = 15/54 (27%), Positives = 26/54 (48%)
Frame = +3
Query: 84 PPTVPAQVEELLPAQRQPPKATPRHLKTVSGGGIEGNQDPVTKALPYSHPQPIR 245
PPTV A ++ A PP+ + + ++ V + ++D + L H PIR
Sbjct: 405 PPTVLADLKRKKTASSPPPEPSSKRVQLVIDSDEDLDEDDIRIDLSAIHVTPIR 458
>12_02_0585 +
20824752-20825954,20826141-20826329,20826533-20826690,
20826913-20827009,20827368-20827730,20829225-20829303,
20830180-20830286
Length = 731
Score = 27.9 bits (59), Expect = 6.5
Identities = 11/28 (39%), Positives = 14/28 (50%)
Frame = -1
Query: 334 RPR*KNCLKWLCLPRTCLRWNRCCWHCG 251
R R N +LC+P RW C W+ G
Sbjct: 619 RERTNNMEAYLCIPSCGGRWTPCAWNGG 646
>08_02_1178 + 24958623-24959894
Length = 423
Score = 27.9 bits (59), Expect = 6.5
Identities = 15/46 (32%), Positives = 19/46 (41%)
Frame = +2
Query: 185 RRKSGSGHKSATVQSSTTDKTSTAVPAAPIPPQARPGQAQPLQAVL 322
R G GH+ S S A P PP A P Q LQ+++
Sbjct: 175 RMFQGGGHRPRVSARSEIPLFSHATKPDPSPPAANPSAKQQLQSLV 220
>06_03_1183 +
28237467-28237612,28238035-28238089,28238216-28238354,
28238433-28238487,28238578-28238646,28239338-28239560,
28239645-28239740,28240708-28240827,28240937-28241062,
28241369-28241524,28242706-28242828,28242913-28242980,
28243119-28243254,28243365-28243530,28243615-28243853
Length = 638
Score = 27.9 bits (59), Expect = 6.5
Identities = 11/38 (28%), Positives = 21/38 (55%), Gaps = 2/38 (5%)
Frame = -3
Query: 125 SWKKLLHLCWNRRW--MLRFHHGYWNYILQCCYQRTWW 18
SWK + W+ R+ ++ + GY++Y+ C+ T W
Sbjct: 538 SWKCVEGTHWHTRFTHLINYGAGYYSYLYARCFATTIW 575
>03_05_1002 -
29594462-29594581,29594686-29594781,29594857-29594916,
29595574-29595618,29595956-29596070,29596200-29596246,
29596529-29596822
Length = 258
Score = 27.9 bits (59), Expect = 6.5
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +2
Query: 245 TSTAVPAAPIPPQARPGQAQPLQAVLLP 328
TS VP +PP ARP A P +L+P
Sbjct: 8 TSLPVPRVSLPPSARPA-AAPRHGLLIP 34
>03_05_0032 + 20043252-20044361
Length = 369
Score = 27.9 bits (59), Expect = 6.5
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +3
Query: 138 PKATPRHLKTVSGGGIEGNQDPVTKALPY 224
P P+HL SGG I G +D + A P+
Sbjct: 133 PVVGPQHLMQASGGCITGPEDALLTACPW 161
>02_05_1327 - 35718908-35719270,35719537-35719953,35720183-35720557
Length = 384
Score = 27.9 bits (59), Expect = 6.5
Identities = 24/72 (33%), Positives = 31/72 (43%)
Frame = +3
Query: 93 VPAQVEELLPAQRQPPKATPRHLKTVSGGGIEGNQDPVTKALPYSHPQPIRRAPQCQQHR 272
+PA ++ LPA AT R L TV G EG + PV PQP P Q+
Sbjct: 239 LPANAKKCLPAAYL---ATVRLLVTV---GAEGGEIPVVPTKILLPPQPFFLPPPSQEKT 292
Query: 273 FHLKHVRGKHNH 308
++ K NH
Sbjct: 293 RKSWGLKEKKNH 304
>02_05_0075 -
25610386-25610508,25610529-25610583,25610801-25611240,
25612951-25613619,25614551-25615870
Length = 868
Score = 27.9 bits (59), Expect = 6.5
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = +2
Query: 188 RKSGSGHKSATVQSSTTDKTSTAVPAAPIPPQARPGQAQP 307
R GSG SA+ +S + +S+A P P ++ QAQP
Sbjct: 290 RTGGSGRTSASAAASCSSSSSSAPPT---PDESHTQQAQP 326
>02_02_0369 -
9505330-9505652,9507262-9507532,9507649-9507690,
9508416-9508458,9508853-9508860
Length = 228
Score = 27.9 bits (59), Expect = 6.5
Identities = 17/47 (36%), Positives = 21/47 (44%)
Frame = +2
Query: 251 TAVPAAPIPPQARPGQAQPLQAVLLPRAVQVHRTLPPLRLVFPGVII 391
T P +PP + P + P+Q LPR TLPP PG I
Sbjct: 135 TGAPPGSMPPGSMPPGSMPMQMAPLPRP----PTLPPPTSGAPGAPI 177
>02_01_0163 +
1135592-1135623,1135718-1135816,1135904-1135960,
1136053-1136116,1136174-1136392,1138562-1138945
Length = 284
Score = 27.9 bits (59), Expect = 6.5
Identities = 25/77 (32%), Positives = 31/77 (40%), Gaps = 1/77 (1%)
Frame = +3
Query: 6 PRKNPPRPLVAALKDIVPVAMMEA*HPPTVPAQVEELLPAQRQPPKATPRHLKTVSGGGI 185
P+ PPR A K +PVA A PP P Q QPP+A + T S
Sbjct: 190 PQPPPPRNQAQADKAPIPVAPPGAAVPPAQP---------QPQPPQAGAEAVTTESTEAT 240
Query: 186 EGNQDPVTKAL-PYSHP 233
+ P T A P+ P
Sbjct: 241 QAANPPATTASNPHQAP 257
>10_08_0383 - 17424194-17425567
Length = 457
Score = 27.5 bits (58), Expect = 8.6
Identities = 21/62 (33%), Positives = 28/62 (45%), Gaps = 9/62 (14%)
Frame = +3
Query: 3 RPRKNPPRPLVAALKDIVPVAMME--------A*HPPTVPAQVEELLP-AQRQPPKATPR 155
RPR PP L A L + +A++ A H P + + + L P A PP PR
Sbjct: 38 RPRSLPPLLLAALLLVLFRLALVAGTLRLASFADHDPALRSLLSRLSPPAPHAPPHPPPR 97
Query: 156 HL 161
HL
Sbjct: 98 HL 99
>08_02_0251 -
14776308-14776495,14777624-14777708,14779125-14779160,
14779930-14780177,14780670-14780901,14781159-14781937,
14781987-14782155
Length = 578
Score = 27.5 bits (58), Expect = 8.6
Identities = 20/89 (22%), Positives = 40/89 (44%), Gaps = 9/89 (10%)
Frame = +3
Query: 108 EELLPAQRQPPKATPRHLKTVSGGGI---EGNQDPVTKALPYSHPQPIRRA------PQC 260
EE+ + +PP P+ T+ G +G + P+ + + ++RA QC
Sbjct: 27 EEVQIEEEEPPLVEPQPEPTLVVGATNEEQGLRSPIA-SYDVNEQDAVQRAYIPKGPNQC 85
Query: 261 QQHRFHLKHVRGKHNHFRQFFYLGRFKYI 347
H F ++ + GK HF F + ++ ++
Sbjct: 86 NPHDFPVREIYGKKRHF-NFVWFHKYHWL 113
>08_01_0627 +
5451140-5451839,5452635-5452662,5452730-5452786,
5453205-5453874
Length = 484
Score = 27.5 bits (58), Expect = 8.6
Identities = 16/51 (31%), Positives = 24/51 (47%), Gaps = 5/51 (9%)
Frame = +2
Query: 185 RRKSGSGHK-----SATVQSSTTDKTSTAVPAAPIPPQARPGQAQPLQAVL 322
RR+ G G++ A V+ TTD+ +P P+P R + P A L
Sbjct: 55 RRRRGRGNRHDPQPEAEVEEDTTDRAELELPYDPLPDILREFRLAPRAAAL 105
>04_03_0823 - 20073972-20074343,20074432-20074657,20074753-20075126
Length = 323
Score = 27.5 bits (58), Expect = 8.6
Identities = 15/33 (45%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = +3
Query: 135 PPKATPRHLKTVSGG-GIEGNQDPVTKALPYSH 230
P TP+ K V+G G+E QD V +AL Y H
Sbjct: 191 PRLLTPQARKLVAGLLGVESAQDAVIRALLYEH 223
>02_02_0240 + 8196140-8198248,8198381-8198650
Length = 792
Score = 27.5 bits (58), Expect = 8.6
Identities = 21/69 (30%), Positives = 32/69 (46%), Gaps = 4/69 (5%)
Frame = +3
Query: 3 RPRKNPPRPLVAALKDIV-PVAMMEA*HPPTVPAQVEELLPAQRQPP---KATPRHLKTV 170
RP PP P + + +V P+ + + PP +P Q PA+ QPP + P+ L+T
Sbjct: 635 RPYSMPPPPHMPTMATMVNPIGIPQP--PPPLPPQP----PAEEQPPQPDEPEPKRLRTD 688
Query: 171 SGGGIEGNQ 197
I Q
Sbjct: 689 DASLIPAEQ 697
>02_01_0348 -
2506007-2506909,2507003-2508120,2508230-2508883,
2508920-2509046
Length = 933
Score = 27.5 bits (58), Expect = 8.6
Identities = 15/54 (27%), Positives = 26/54 (48%)
Frame = +3
Query: 84 PPTVPAQVEELLPAQRQPPKATPRHLKTVSGGGIEGNQDPVTKALPYSHPQPIR 245
PPTV A ++ A PP+ + + ++ V E ++D + L H PI+
Sbjct: 393 PPTVLADLKRKKTASSPPPEPSSKRVQFVIDSDEELDEDDIRIDLSAIHVTPIQ 446
>02_01_0029 -
176002-176137,176495-176646,177166-177577,178010-178126,
178260-178322,178964-179167,180605-180687,182394-182516,
182987-183328
Length = 543
Score = 27.5 bits (58), Expect = 8.6
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -3
Query: 272 SVLLALRCSSYRLWMTVR*RFCDRILISFYST 177
SVLL L C S+ LWM ++ + + F ST
Sbjct: 378 SVLLVLNCISFSLWMLLQGKLTKKYPAVFSST 409
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,340,914
Number of Sequences: 37544
Number of extensions: 315248
Number of successful extensions: 1460
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 1355
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1449
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1423789920
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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