Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0348.Seq
(598 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY341186-1|AAR13750.1| 189|Anopheles gambiae GNBP A1 protein. 28 0.26
AY341185-1|AAR13749.1| 189|Anopheles gambiae GNBP A1 protein. 28 0.26
AY341183-1|AAR13747.1| 189|Anopheles gambiae GNBP A1 protein. 28 0.26
AY341187-1|AAR13751.1| 189|Anopheles gambiae GNBP A1 protein. 27 0.35
AY341184-1|AAR13748.1| 187|Anopheles gambiae GNBP A1 protein. 27 0.61
AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein. 25 1.9
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein. 25 2.5
AB090815-1|BAC57905.1| 492|Anopheles gambiae gag-like protein p... 25 2.5
AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcript... 24 4.3
DQ370043-1|ABD18604.1| 161|Anopheles gambiae putative TIL domai... 23 7.5
AY578808-1|AAT07313.1| 458|Anopheles gambiae saxophone protein. 23 9.9
AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript... 23 9.9
>AY341186-1|AAR13750.1| 189|Anopheles gambiae GNBP A1 protein.
Length = 189
Score = 27.9 bits (59), Expect = 0.26
Identities = 13/43 (30%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Frame = +2
Query: 167 GFWWWNRRKSGSGHKSATVQSSTTDKTSTAV-PAAPIPPQARP 292
G+W +++ + + K+ STT T+T V P PP P
Sbjct: 104 GYWLTDKKHTVTRTKATVAPKSTTTTTTTTVKPTTTTPPPCPP 146
>AY341185-1|AAR13749.1| 189|Anopheles gambiae GNBP A1 protein.
Length = 189
Score = 27.9 bits (59), Expect = 0.26
Identities = 13/43 (30%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Frame = +2
Query: 167 GFWWWNRRKSGSGHKSATVQSSTTDKTSTAV-PAAPIPPQARP 292
G+W +++ + + K+ STT T+T V P PP P
Sbjct: 104 GYWLTDKKHTVTRTKATVAPKSTTTTTTTTVKPTTTTPPPCPP 146
>AY341183-1|AAR13747.1| 189|Anopheles gambiae GNBP A1 protein.
Length = 189
Score = 27.9 bits (59), Expect = 0.26
Identities = 13/43 (30%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Frame = +2
Query: 167 GFWWWNRRKSGSGHKSATVQSSTTDKTSTAV-PAAPIPPQARP 292
G+W +++ + + K+ STT T+T V P PP P
Sbjct: 104 GYWLTDKKHTVTRTKATVAPKSTTTTTTTTVKPTTTTPPPCPP 146
>AY341187-1|AAR13751.1| 189|Anopheles gambiae GNBP A1 protein.
Length = 189
Score = 27.5 bits (58), Expect = 0.35
Identities = 13/43 (30%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Frame = +2
Query: 167 GFWWWNRRKSGSGHKSATVQSSTTDKTSTAV-PAAPIPPQARP 292
G+W +++ + + K+ STT T+T V P PP P
Sbjct: 104 GYWLTDKKHTITRTKATVAPKSTTTTTTTTVKPTTTTPPPCPP 146
>AY341184-1|AAR13748.1| 187|Anopheles gambiae GNBP A1 protein.
Length = 187
Score = 26.6 bits (56), Expect = 0.61
Identities = 13/42 (30%), Positives = 21/42 (50%)
Frame = +2
Query: 167 GFWWWNRRKSGSGHKSATVQSSTTDKTSTAVPAAPIPPQARP 292
G+W +++ + + K ATV +T T+T P PP P
Sbjct: 104 GYWLTDKKHTVTRTK-ATVAPKSTTTTTTVKPTTTTPPPCPP 144
>AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.
Length = 1356
Score = 25.0 bits (52), Expect = 1.9
Identities = 10/27 (37%), Positives = 13/27 (48%)
Frame = +3
Query: 84 PPTVPAQVEELLPAQRQPPKATPRHLK 164
PP+ AQ+ P PP + HLK
Sbjct: 1328 PPSTQAQLRPSAPLNTSPPNSWHSHLK 1354
>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
Length = 1664
Score = 24.6 bits (51), Expect = 2.5
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = +3
Query: 84 PPTVPAQVEELLPAQRQPPKATPRH 158
PP PA++ PA P K + RH
Sbjct: 1451 PPASPARLARSSPASPTPSKKSKRH 1475
>AB090815-1|BAC57905.1| 492|Anopheles gambiae gag-like protein
protein.
Length = 492
Score = 24.6 bits (51), Expect = 2.5
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +3
Query: 18 PPRPLVAALKDI 53
PPRPL +ALKDI
Sbjct: 8 PPRPLGSALKDI 19
>AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcriptase
protein.
Length = 1049
Score = 23.8 bits (49), Expect = 4.3
Identities = 16/57 (28%), Positives = 25/57 (43%), Gaps = 1/57 (1%)
Frame = +3
Query: 87 PTVPAQVEELLPAQRQPPKATPRHLKTVSGGGIEGNQDPVTKALPYSHPQPI-RRAP 254
PT+ + +P RQ LK + GI+G + KA ++P +RAP
Sbjct: 381 PTINTPETDPVPITRQEIINLANRLKCGNAPGIDGIPNMAIKAAMLAYPDVFKKRAP 437
>DQ370043-1|ABD18604.1| 161|Anopheles gambiae putative TIL domain
polypeptide protein.
Length = 161
Score = 23.0 bits (47), Expect = 7.5
Identities = 9/26 (34%), Positives = 14/26 (53%)
Frame = -1
Query: 463 YRICFRSKGIFFLDQACVKVCSRLND 386
Y +C ++ + AC K C+ LND
Sbjct: 32 YDLCGPNEELLECGTACPKTCADLND 57
>AY578808-1|AAT07313.1| 458|Anopheles gambiae saxophone protein.
Length = 458
Score = 22.6 bits (46), Expect = 9.9
Identities = 9/27 (33%), Positives = 16/27 (59%)
Frame = -1
Query: 442 KGIFFLDQACVKVCSRLNDDSWKH*TK 362
+GI+ + VK+ ++DSWK T+
Sbjct: 167 RGIWHGESVAVKIFFSRDEDSWKRETE 193
>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
protein.
Length = 1222
Score = 22.6 bits (46), Expect = 9.9
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = +3
Query: 273 FHLKHVRGKHNHFRQFFYLGRF 338
FHL V H +FR++ ++ F
Sbjct: 923 FHLSQVLTGHGYFREYLHVCGF 944
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 529,697
Number of Sequences: 2352
Number of extensions: 11956
Number of successful extensions: 36
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 57609459
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -