Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0347.Seq
         (598 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...    37   6e-04
AJ302655-1|CAC35520.1|  332|Anopheles gambiae gSG5 protein protein.    26   1.1  
AY534996-1|AAT07394.1|  471|Anopheles gambiae XK-related b protein.    25   1.9  
AF387862-1|AAL56547.1|  476|Anopheles gambiae gag polyprotein pr...    25   1.9  
AF043440-1|AAC05665.1|  234|Anopheles gambiae putative pupal-spe...    23   5.7  
AY330183-1|AAQ16289.1|  190|Anopheles gambiae odorant-binding pr...    23   7.5  
AJ618925-1|CAF02004.1|  204|Anopheles gambiae odorant-binding pr...    23   7.5  
AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.          23   9.9  
AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.       23   9.9  

>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
           protein.
          Length = 596

 Score = 36.7 bits (81), Expect = 6e-04
 Identities = 19/62 (30%), Positives = 30/62 (48%)
 Frame = +1

Query: 346 EVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPDSYVWKEFIGVXQT 525
           +V VSG    + ++ FE +   + V   V+   Y +PTPIQ    P     ++ +   QT
Sbjct: 161 QVRVSGENPPDHVESFERSGLREEVMTNVRKSSYTKPTPIQRYAIPIILNGRDLMACAQT 220

Query: 526 GS 531
           GS
Sbjct: 221 GS 222


>AJ302655-1|CAC35520.1|  332|Anopheles gambiae gSG5 protein protein.
          Length = 332

 Score = 25.8 bits (54), Expect = 1.1
 Identities = 11/43 (25%), Positives = 24/43 (55%)
 Frame = +2

Query: 221 QNMRRPDWDSVYSNLSTKTFMIHILQFSKDHHMKSKSIEINTR 349
           QN+ RP+   ++  L+T  F +++ Q  +  H++   + I +R
Sbjct: 94  QNISRPNLGELFQKLTTGFFSLNLFQIGQ--HVRGVLVSIKSR 134


>AY534996-1|AAT07394.1|  471|Anopheles gambiae XK-related b protein.
          Length = 471

 Score = 25.0 bits (52), Expect = 1.9
 Identities = 14/47 (29%), Positives = 22/47 (46%)
 Frame = -1

Query: 148 RRIIAEFVASSKFGTTVSTAIIPVTRHDYFSDLVEDVYLNYGFFLTQ 8
           RR+ A+  A ++F          ++   YF D+V DV L Y  +  Q
Sbjct: 59  RRVRAKSKAMTEFLPLCDVLFNVISLAGYFCDVVFDVVLGYALYERQ 105


>AF387862-1|AAL56547.1|  476|Anopheles gambiae gag polyprotein
           protein.
          Length = 476

 Score = 25.0 bits (52), Expect = 1.9
 Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 6/38 (15%)
 Frame = -3

Query: 221 ALQRILFSHQSLQILQ------IYCHRCQTETNYRRIC 126
           A +R+  SHQS  IL+      I CHRC+   + +R C
Sbjct: 180 AQKRMEKSHQSESILRVGPEKKITCHRCRKPGHMKRDC 217


>AF043440-1|AAC05665.1|  234|Anopheles gambiae putative
           pupal-specific cuticular proteinCP2d protein.
          Length = 234

 Score = 23.4 bits (48), Expect = 5.7
 Identities = 10/31 (32%), Positives = 17/31 (54%)
 Frame = +1

Query: 298 VLKRSPYEVEEYRNKHEVTVSGVEVHNPIQY 390
           V++R P  V+  +  H+V    V VH P+ +
Sbjct: 139 VVRREPSAVKIAQPVHKVIAQPVHVHAPVAH 169


>AY330183-1|AAQ16289.1|  190|Anopheles gambiae odorant-binding
           protein AgamOBP57 protein.
          Length = 190

 Score = 23.0 bits (47), Expect = 7.5
 Identities = 7/27 (25%), Positives = 16/27 (59%)
 Frame = +3

Query: 426 RCKDNGLQRTDAHSSSRLAR*LCLERI 506
           RC ++G ++++ H+     R  C+E +
Sbjct: 38  RCCNDGFEKSEVHAKFAEVRTACMEEL 64


>AJ618925-1|CAF02004.1|  204|Anopheles gambiae odorant-binding
           protein OBP14426 protein.
          Length = 204

 Score = 23.0 bits (47), Expect = 7.5
 Identities = 7/27 (25%), Positives = 16/27 (59%)
 Frame = +3

Query: 426 RCKDNGLQRTDAHSSSRLAR*LCLERI 506
           RC ++G ++++ H+     R  C+E +
Sbjct: 38  RCCNDGFEKSEVHAKFAEVRTACMEEL 64


>AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.
          Length = 1132

 Score = 22.6 bits (46), Expect = 9.9
 Identities = 8/18 (44%), Positives = 14/18 (77%)
 Frame = -3

Query: 530 EPVWXTPINSFQT*LSGQ 477
           EPV+  PIN+ ++ L+G+
Sbjct: 378 EPVYSNPINNMKSALTGE 395


>AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.
          Length = 1009

 Score = 22.6 bits (46), Expect = 9.9
 Identities = 10/36 (27%), Positives = 19/36 (52%)
 Frame = +1

Query: 352 TVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPT 459
           T S VE    + ++EE ++ ++  +   T+G K  T
Sbjct: 266 TASPVEPEEGVDFYEELSYDNHPCKRACTLGRKPET 301


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 584,227
Number of Sequences: 2352
Number of extensions: 11681
Number of successful extensions: 25
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 57609459
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)