Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0347.Seq
(598 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X52846-1|CAA37037.1| 575|Drosophila melanogaster protein ( Dros... 114 7e-26
BT015209-1|AAT94438.1| 575|Drosophila melanogaster RE56857p pro... 114 7e-26
BT011476-1|AAR99134.1| 719|Drosophila melanogaster RE11923p pro... 114 7e-26
BT001716-1|AAN71471.1| 578|Drosophila melanogaster RE68337p pro... 114 7e-26
AE014297-394|AAG22212.1| 578|Drosophila melanogaster CG10279-PF... 114 7e-26
AE014297-393|AAN14332.1| 578|Drosophila melanogaster CG10279-PC... 114 7e-26
AE014297-392|AAF51926.2| 578|Drosophila melanogaster CG10279-PB... 114 7e-26
AE014297-391|AAF51927.2| 578|Drosophila melanogaster CG10279-PE... 114 7e-26
AE014297-390|AAN14331.1| 575|Drosophila melanogaster CG10279-PD... 114 7e-26
AE014297-389|AAG22213.2| 719|Drosophila melanogaster CG10279-PA... 114 7e-26
AY102660-1|AAM27489.1| 818|Drosophila melanogaster GH10652p pro... 94 1e-19
AE014296-1163|AAF50635.2| 818|Drosophila melanogaster CG10077-P... 94 1e-19
AY060404-1|AAL25443.1| 945|Drosophila melanogaster LD32873p pro... 93 3e-19
AE014298-1087|AAF46295.1| 945|Drosophila melanogaster CG10777-P... 93 3e-19
AY061400-1|AAL28948.1| 791|Drosophila melanogaster LD32732p pro... 64 1e-10
AE014296-1853|AAF50131.1| 791|Drosophila melanogaster CG6418-PB... 64 1e-10
BT021222-1|AAX33370.1| 822|Drosophila melanogaster RH55640p pro... 60 2e-09
AY060822-1|AAL28370.1| 641|Drosophila melanogaster GM01081p pro... 60 2e-09
AE014134-2947|AAF53680.2| 822|Drosophila melanogaster CG10333-P... 60 2e-09
AY051831-1|AAK93255.1| 703|Drosophila melanogaster LD33749p pro... 60 3e-09
BT016090-1|AAV36975.1| 1224|Drosophila melanogaster LD41277p pro... 58 9e-09
AE014298-2134|AAF48446.1| 1224|Drosophila melanogaster CG6227-PA... 58 9e-09
AY051752-1|AAK93176.1| 619|Drosophila melanogaster LD28839p pro... 57 2e-08
AF212866-1|AAF19985.1| 619|Drosophila melanogaster abstrakt pro... 57 2e-08
AF187729-1|AAF04040.1| 614|Drosophila melanogaster DEAD-box pro... 57 2e-08
AE014297-15|AAF52165.1| 619|Drosophila melanogaster CG14637-PA ... 57 2e-08
M23560-1|AAA29013.1| 648|Drosophila melanogaster protein ( D.me... 47 2e-05
AE014134-2564|AAF53438.1| 661|Drosophila melanogaster CG3506-PA... 47 2e-05
X12945-1|CAA31405.1| 661|Drosophila melanogaster vasa protein. 45 7e-05
AE014298-914|AAF46176.1| 438|Drosophila melanogaster CG14443-PA... 45 7e-05
BT004908-1|AAO49161.1| 782|Drosophila melanogaster LD15481p pro... 37 0.024
AF181659-1|AAD55444.1| 641|Drosophila melanogaster BcDNA.GM0530... 37 0.024
AE013599-611|AAF59119.1| 782|Drosophila melanogaster CG2173-PA ... 37 0.024
AE014296-2963|AAF49303.1| 594|Drosophila melanogaster CG5589-PA... 33 0.22
AY089613-1|AAL90351.1| 798|Drosophila melanogaster RE28061p pro... 32 0.68
AE014297-778|AAF54262.1| 798|Drosophila melanogaster CG9748-PA ... 32 0.68
AY075397-1|AAL68229.1| 827|Drosophila melanogaster LD28101p pro... 30 2.7
AE014296-83|AAN11439.1| 827|Drosophila melanogaster CG32344-PA ... 30 2.7
AE014134-1750|AAF52845.2| 1489|Drosophila melanogaster CG31755-P... 30 2.7
AE014297-4128|AAF56713.2| 391|Drosophila melanogaster CG13976-P... 29 6.3
U84552-1|AAC27683.1| 663|Drosophila melanogaster helicase pitch... 28 8.4
AY119620-1|AAM50274.1| 680|Drosophila melanogaster LD46167p pro... 28 8.4
AY071402-1|AAL49024.1| 680|Drosophila melanogaster RE48840p pro... 28 8.4
AF172635-1|AAD46928.1| 542|Drosophila melanogaster GM12270p pro... 28 8.4
AE014297-3091|AAN13900.2| 680|Drosophila melanogaster CG6375-PB... 28 8.4
AE014297-3090|AAF55951.2| 680|Drosophila melanogaster CG6375-PA... 28 8.4
AE013599-1409|AAM71027.1| 512|Drosophila melanogaster CG8439-PB... 28 8.4
AE013599-1408|AAF58565.1| 542|Drosophila melanogaster CG8439-PA... 28 8.4
>X52846-1|CAA37037.1| 575|Drosophila melanogaster protein (
Drosophila melanogasterRM62 mRNA for novel RNA helicase.
).
Length = 575
Score = 114 bits (275), Expect = 7e-26
Identities = 51/95 (53%), Positives = 63/95 (66%)
Frame = +1
Query: 247 FCLLQPFNKNFYDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQ 426
F L PF KNFY HP V RSPYEV+ YR + E+TV G +V NPIQ F E + PDYV +
Sbjct: 92 FSNLAPFKKNFYQEHPNVANRSPYEVQRYREEQEITVRG-QVPNPIQDFSEVHLPDYVMK 150
Query: 427 GVKTMGYKEPTPIQAQGWPDSYVWKEFIGVXQTGS 531
++ GYK PT IQAQGWP + F+G+ +TGS
Sbjct: 151 EIRRQGYKAPTAIQAQGWPIAMSGSNFVGIAKTGS 185
Score = 34.3 bits (75), Expect = 0.13
Identities = 16/33 (48%), Positives = 19/33 (57%)
Frame = +2
Query: 482 PIAMSGKNLLAXPKRVPGKNVGLHLASXCHINN 580
PIAMSG N + K GK +G L + HINN
Sbjct: 169 PIAMSGSNFVGIAKTGSGKTLGYILPAIVHINN 201
>BT015209-1|AAT94438.1| 575|Drosophila melanogaster RE56857p
protein.
Length = 575
Score = 114 bits (275), Expect = 7e-26
Identities = 51/95 (53%), Positives = 63/95 (66%)
Frame = +1
Query: 247 FCLLQPFNKNFYDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQ 426
F L PF KNFY HP V RSPYEV+ YR + E+TV G +V NPIQ F E + PDYV +
Sbjct: 92 FSNLAPFKKNFYQEHPNVANRSPYEVQRYREEQEITVRG-QVPNPIQDFSEVHLPDYVMK 150
Query: 427 GVKTMGYKEPTPIQAQGWPDSYVWKEFIGVXQTGS 531
++ GYK PT IQAQGWP + F+G+ +TGS
Sbjct: 151 EIRRQGYKAPTAIQAQGWPIAMSGSNFVGIAKTGS 185
Score = 34.3 bits (75), Expect = 0.13
Identities = 16/33 (48%), Positives = 19/33 (57%)
Frame = +2
Query: 482 PIAMSGKNLLAXPKRVPGKNVGLHLASXCHINN 580
PIAMSG N + K GK +G L + HINN
Sbjct: 169 PIAMSGSNFVGIAKTGSGKTLGYILPAIVHINN 201
>BT011476-1|AAR99134.1| 719|Drosophila melanogaster RE11923p
protein.
Length = 719
Score = 114 bits (275), Expect = 7e-26
Identities = 51/95 (53%), Positives = 63/95 (66%)
Frame = +1
Query: 247 FCLLQPFNKNFYDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQ 426
F L PF KNFY HP V RSPYEV+ YR + E+TV G +V NPIQ F E + PDYV +
Sbjct: 236 FSNLAPFKKNFYQEHPNVANRSPYEVQRYREEQEITVRG-QVPNPIQDFSEVHLPDYVMK 294
Query: 427 GVKTMGYKEPTPIQAQGWPDSYVWKEFIGVXQTGS 531
++ GYK PT IQAQGWP + F+G+ +TGS
Sbjct: 295 EIRRQGYKAPTAIQAQGWPIAMSGSNFVGIAKTGS 329
Score = 34.3 bits (75), Expect = 0.13
Identities = 16/33 (48%), Positives = 19/33 (57%)
Frame = +2
Query: 482 PIAMSGKNLLAXPKRVPGKNVGLHLASXCHINN 580
PIAMSG N + K GK +G L + HINN
Sbjct: 313 PIAMSGSNFVGIAKTGSGKTLGYILPAIVHINN 345
>BT001716-1|AAN71471.1| 578|Drosophila melanogaster RE68337p
protein.
Length = 578
Score = 114 bits (275), Expect = 7e-26
Identities = 51/95 (53%), Positives = 63/95 (66%)
Frame = +1
Query: 247 FCLLQPFNKNFYDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQ 426
F L PF KNFY HP V RSPYEV+ YR + E+TV G +V NPIQ F E + PDYV +
Sbjct: 95 FSNLAPFKKNFYQEHPNVANRSPYEVQRYREEQEITVRG-QVPNPIQDFSEVHLPDYVMK 153
Query: 427 GVKTMGYKEPTPIQAQGWPDSYVWKEFIGVXQTGS 531
++ GYK PT IQAQGWP + F+G+ +TGS
Sbjct: 154 EIRRQGYKAPTAIQAQGWPIAMSGSNFVGIAKTGS 188
Score = 34.3 bits (75), Expect = 0.13
Identities = 16/33 (48%), Positives = 19/33 (57%)
Frame = +2
Query: 482 PIAMSGKNLLAXPKRVPGKNVGLHLASXCHINN 580
PIAMSG N + K GK +G L + HINN
Sbjct: 172 PIAMSGSNFVGIAKTGSGKTLGYILPAIVHINN 204
>AE014297-394|AAG22212.1| 578|Drosophila melanogaster CG10279-PF,
isoform F protein.
Length = 578
Score = 114 bits (275), Expect = 7e-26
Identities = 51/95 (53%), Positives = 63/95 (66%)
Frame = +1
Query: 247 FCLLQPFNKNFYDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQ 426
F L PF KNFY HP V RSPYEV+ YR + E+TV G +V NPIQ F E + PDYV +
Sbjct: 95 FSNLAPFKKNFYQEHPNVANRSPYEVQRYREEQEITVRG-QVPNPIQDFSEVHLPDYVMK 153
Query: 427 GVKTMGYKEPTPIQAQGWPDSYVWKEFIGVXQTGS 531
++ GYK PT IQAQGWP + F+G+ +TGS
Sbjct: 154 EIRRQGYKAPTAIQAQGWPIAMSGSNFVGIAKTGS 188
Score = 34.3 bits (75), Expect = 0.13
Identities = 16/33 (48%), Positives = 19/33 (57%)
Frame = +2
Query: 482 PIAMSGKNLLAXPKRVPGKNVGLHLASXCHINN 580
PIAMSG N + K GK +G L + HINN
Sbjct: 172 PIAMSGSNFVGIAKTGSGKTLGYILPAIVHINN 204
>AE014297-393|AAN14332.1| 578|Drosophila melanogaster CG10279-PC,
isoform C protein.
Length = 578
Score = 114 bits (275), Expect = 7e-26
Identities = 51/95 (53%), Positives = 63/95 (66%)
Frame = +1
Query: 247 FCLLQPFNKNFYDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQ 426
F L PF KNFY HP V RSPYEV+ YR + E+TV G +V NPIQ F E + PDYV +
Sbjct: 95 FSNLAPFKKNFYQEHPNVANRSPYEVQRYREEQEITVRG-QVPNPIQDFSEVHLPDYVMK 153
Query: 427 GVKTMGYKEPTPIQAQGWPDSYVWKEFIGVXQTGS 531
++ GYK PT IQAQGWP + F+G+ +TGS
Sbjct: 154 EIRRQGYKAPTAIQAQGWPIAMSGSNFVGIAKTGS 188
Score = 34.3 bits (75), Expect = 0.13
Identities = 16/33 (48%), Positives = 19/33 (57%)
Frame = +2
Query: 482 PIAMSGKNLLAXPKRVPGKNVGLHLASXCHINN 580
PIAMSG N + K GK +G L + HINN
Sbjct: 172 PIAMSGSNFVGIAKTGSGKTLGYILPAIVHINN 204
>AE014297-392|AAF51926.2| 578|Drosophila melanogaster CG10279-PB,
isoform B protein.
Length = 578
Score = 114 bits (275), Expect = 7e-26
Identities = 51/95 (53%), Positives = 63/95 (66%)
Frame = +1
Query: 247 FCLLQPFNKNFYDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQ 426
F L PF KNFY HP V RSPYEV+ YR + E+TV G +V NPIQ F E + PDYV +
Sbjct: 95 FSNLAPFKKNFYQEHPNVANRSPYEVQRYREEQEITVRG-QVPNPIQDFSEVHLPDYVMK 153
Query: 427 GVKTMGYKEPTPIQAQGWPDSYVWKEFIGVXQTGS 531
++ GYK PT IQAQGWP + F+G+ +TGS
Sbjct: 154 EIRRQGYKAPTAIQAQGWPIAMSGSNFVGIAKTGS 188
Score = 34.3 bits (75), Expect = 0.13
Identities = 16/33 (48%), Positives = 19/33 (57%)
Frame = +2
Query: 482 PIAMSGKNLLAXPKRVPGKNVGLHLASXCHINN 580
PIAMSG N + K GK +G L + HINN
Sbjct: 172 PIAMSGSNFVGIAKTGSGKTLGYILPAIVHINN 204
>AE014297-391|AAF51927.2| 578|Drosophila melanogaster CG10279-PE,
isoform E protein.
Length = 578
Score = 114 bits (275), Expect = 7e-26
Identities = 51/95 (53%), Positives = 63/95 (66%)
Frame = +1
Query: 247 FCLLQPFNKNFYDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQ 426
F L PF KNFY HP V RSPYEV+ YR + E+TV G +V NPIQ F E + PDYV +
Sbjct: 95 FSNLAPFKKNFYQEHPNVANRSPYEVQRYREEQEITVRG-QVPNPIQDFSEVHLPDYVMK 153
Query: 427 GVKTMGYKEPTPIQAQGWPDSYVWKEFIGVXQTGS 531
++ GYK PT IQAQGWP + F+G+ +TGS
Sbjct: 154 EIRRQGYKAPTAIQAQGWPIAMSGSNFVGIAKTGS 188
Score = 34.3 bits (75), Expect = 0.13
Identities = 16/33 (48%), Positives = 19/33 (57%)
Frame = +2
Query: 482 PIAMSGKNLLAXPKRVPGKNVGLHLASXCHINN 580
PIAMSG N + K GK +G L + HINN
Sbjct: 172 PIAMSGSNFVGIAKTGSGKTLGYILPAIVHINN 204
>AE014297-390|AAN14331.1| 575|Drosophila melanogaster CG10279-PD,
isoform D protein.
Length = 575
Score = 114 bits (275), Expect = 7e-26
Identities = 51/95 (53%), Positives = 63/95 (66%)
Frame = +1
Query: 247 FCLLQPFNKNFYDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQ 426
F L PF KNFY HP V RSPYEV+ YR + E+TV G +V NPIQ F E + PDYV +
Sbjct: 92 FSNLAPFKKNFYQEHPNVANRSPYEVQRYREEQEITVRG-QVPNPIQDFSEVHLPDYVMK 150
Query: 427 GVKTMGYKEPTPIQAQGWPDSYVWKEFIGVXQTGS 531
++ GYK PT IQAQGWP + F+G+ +TGS
Sbjct: 151 EIRRQGYKAPTAIQAQGWPIAMSGSNFVGIAKTGS 185
Score = 34.3 bits (75), Expect = 0.13
Identities = 16/33 (48%), Positives = 19/33 (57%)
Frame = +2
Query: 482 PIAMSGKNLLAXPKRVPGKNVGLHLASXCHINN 580
PIAMSG N + K GK +G L + HINN
Sbjct: 169 PIAMSGSNFVGIAKTGSGKTLGYILPAIVHINN 201
>AE014297-389|AAG22213.2| 719|Drosophila melanogaster CG10279-PA,
isoform A protein.
Length = 719
Score = 114 bits (275), Expect = 7e-26
Identities = 51/95 (53%), Positives = 63/95 (66%)
Frame = +1
Query: 247 FCLLQPFNKNFYDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQ 426
F L PF KNFY HP V RSPYEV+ YR + E+TV G +V NPIQ F E + PDYV +
Sbjct: 236 FSNLAPFKKNFYQEHPNVANRSPYEVQRYREEQEITVRG-QVPNPIQDFSEVHLPDYVMK 294
Query: 427 GVKTMGYKEPTPIQAQGWPDSYVWKEFIGVXQTGS 531
++ GYK PT IQAQGWP + F+G+ +TGS
Sbjct: 295 EIRRQGYKAPTAIQAQGWPIAMSGSNFVGIAKTGS 329
Score = 34.3 bits (75), Expect = 0.13
Identities = 16/33 (48%), Positives = 19/33 (57%)
Frame = +2
Query: 482 PIAMSGKNLLAXPKRVPGKNVGLHLASXCHINN 580
PIAMSG N + K GK +G L + HINN
Sbjct: 313 PIAMSGSNFVGIAKTGSGKTLGYILPAIVHINN 345
>AY102660-1|AAM27489.1| 818|Drosophila melanogaster GH10652p
protein.
Length = 818
Score = 94.3 bits (224), Expect = 1e-19
Identities = 42/92 (45%), Positives = 57/92 (61%)
Frame = +1
Query: 256 LQPFNKNFYDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVK 435
L PF KNFY P +VL R+ E E + +E+T+ G +V P FEE FPDYV ++
Sbjct: 114 LTPFRKNFYKPCDSVLARTVGETETFLTSNEITIKGDQVPTPSIEFEEGGFPDYVMNEIR 173
Query: 436 TMGYKEPTPIQAQGWPDSYVWKEFIGVXQTGS 531
G+ +PT IQAQGWP + ++ +GV QTGS
Sbjct: 174 KQGFAKPTAIQAQGWPIAMSGRDLVGVAQTGS 205
Score = 30.7 bits (66), Expect = 1.6
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +2
Query: 482 PIAMSGKNLLAXPKRVPGKNVGLHLASXCHINN 580
PIAMSG++L+ + GK + L + HINN
Sbjct: 189 PIAMSGRDLVGVAQTGSGKTLAYVLPAVVHINN 221
>AE014296-1163|AAF50635.2| 818|Drosophila melanogaster CG10077-PA,
isoform A protein.
Length = 818
Score = 94.3 bits (224), Expect = 1e-19
Identities = 42/92 (45%), Positives = 57/92 (61%)
Frame = +1
Query: 256 LQPFNKNFYDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVK 435
L PF KNFY P +VL R+ E E + +E+T+ G +V P FEE FPDYV ++
Sbjct: 114 LTPFRKNFYKPCDSVLARTVGETETFLTSNEITIKGDQVPTPSIEFEEGGFPDYVMNEIR 173
Query: 436 TMGYKEPTPIQAQGWPDSYVWKEFIGVXQTGS 531
G+ +PT IQAQGWP + ++ +GV QTGS
Sbjct: 174 KQGFAKPTAIQAQGWPIAMSGRDLVGVAQTGS 205
Score = 30.7 bits (66), Expect = 1.6
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +2
Query: 482 PIAMSGKNLLAXPKRVPGKNVGLHLASXCHINN 580
PIAMSG++L+ + GK + L + HINN
Sbjct: 189 PIAMSGRDLVGVAQTGSGKTLAYVLPAVVHINN 221
>AY060404-1|AAL25443.1| 945|Drosophila melanogaster LD32873p
protein.
Length = 945
Score = 92.7 bits (220), Expect = 3e-19
Identities = 40/92 (43%), Positives = 63/92 (68%)
Frame = +1
Query: 256 LQPFNKNFYDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVK 435
L+PF K+FY+ HP L +S +V E R + E+TVSG E+ +P+ FEE++ P +V + +K
Sbjct: 194 LEPFLKDFYNIHPNTLAKSEQQVAEIRRELEITVSGNELPHPVVSFEESSLPAHVIEEMK 253
Query: 436 TMGYKEPTPIQAQGWPDSYVWKEFIGVXQTGS 531
G+ +PT IQ+QGWP + ++ +G+ QTGS
Sbjct: 254 RQGFTKPTAIQSQGWPIALSGRDLVGIAQTGS 285
>AE014298-1087|AAF46295.1| 945|Drosophila melanogaster CG10777-PB
protein.
Length = 945
Score = 92.7 bits (220), Expect = 3e-19
Identities = 40/92 (43%), Positives = 63/92 (68%)
Frame = +1
Query: 256 LQPFNKNFYDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVK 435
L+PF K+FY+ HP L +S +V E R + E+TVSG E+ +P+ FEE++ P +V + +K
Sbjct: 194 LEPFLKDFYNIHPNTLAKSEQQVAEIRRELEITVSGNELPHPVVSFEESSLPAHVIEEMK 253
Query: 436 TMGYKEPTPIQAQGWPDSYVWKEFIGVXQTGS 531
G+ +PT IQ+QGWP + ++ +G+ QTGS
Sbjct: 254 RQGFTKPTAIQSQGWPIALSGRDLVGIAQTGS 285
>AY061400-1|AAL28948.1| 791|Drosophila melanogaster LD32732p
protein.
Length = 791
Score = 64.5 bits (150), Expect = 1e-10
Identities = 34/109 (31%), Positives = 51/109 (46%), Gaps = 3/109 (2%)
Frame = +1
Query: 259 QPFNKNFYDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKT 438
+PF KNFY H + +V E R V V+G P+ F F + + + V+
Sbjct: 227 EPFEKNFYTQHDDIAALDDEQVRELRRTLGVKVTGPSPPKPVTSFGHFGFDEQLIKAVRK 286
Query: 439 MGYKEPTPIQAQGWPDSYVWKEFIGVXQTGSRQKR---WPTSCQXLSHK 576
Y +PTPIQAQ P + ++ IG+ +TGS + WP + K
Sbjct: 287 AEYTQPTPIQAQAVPTALSGRDIIGIAKTGSGKTAAFIWPMLMHVMDQK 335
>AE014296-1853|AAF50131.1| 791|Drosophila melanogaster CG6418-PB
protein.
Length = 791
Score = 64.5 bits (150), Expect = 1e-10
Identities = 34/109 (31%), Positives = 51/109 (46%), Gaps = 3/109 (2%)
Frame = +1
Query: 259 QPFNKNFYDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKT 438
+PF KNFY H + +V E R V V+G P+ F F + + + V+
Sbjct: 227 EPFEKNFYTQHDDIAALDDEQVRELRRTLGVKVTGPSPPKPVTSFGHFGFDEQLIKAVRK 286
Query: 439 MGYKEPTPIQAQGWPDSYVWKEFIGVXQTGSRQKR---WPTSCQXLSHK 576
Y +PTPIQAQ P + ++ IG+ +TGS + WP + K
Sbjct: 287 AEYTQPTPIQAQAVPTALSGRDIIGIAKTGSGKTAAFIWPMLMHVMDQK 335
>BT021222-1|AAX33370.1| 822|Drosophila melanogaster RH55640p
protein.
Length = 822
Score = 60.1 bits (139), Expect = 2e-09
Identities = 27/67 (40%), Positives = 40/67 (59%)
Frame = +1
Query: 331 YRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPDSYVWKEFI 510
+R + VT+ G + NPI+ + E+ FP + + +GYKEPTPIQ Q P ++ I
Sbjct: 376 FREDYNVTIKGGRIPNPIRSWNESGFPKEIIDIIDKVGYKEPTPIQRQAIPIGLQNRDII 435
Query: 511 GVXQTGS 531
GV +TGS
Sbjct: 436 GVAETGS 442
>AY060822-1|AAL28370.1| 641|Drosophila melanogaster GM01081p
protein.
Length = 641
Score = 60.1 bits (139), Expect = 2e-09
Identities = 27/67 (40%), Positives = 40/67 (59%)
Frame = +1
Query: 331 YRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPDSYVWKEFI 510
+R + VT+ G + NPI+ + E+ FP + + +GYKEPTPIQ Q P ++ I
Sbjct: 195 FREDYNVTIKGGRIPNPIRSWNESGFPKEIIDIIDKVGYKEPTPIQRQAIPIGLQNRDII 254
Query: 511 GVXQTGS 531
GV +TGS
Sbjct: 255 GVAETGS 261
>AE014134-2947|AAF53680.2| 822|Drosophila melanogaster CG10333-PA
protein.
Length = 822
Score = 60.1 bits (139), Expect = 2e-09
Identities = 27/67 (40%), Positives = 40/67 (59%)
Frame = +1
Query: 331 YRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPDSYVWKEFI 510
+R + VT+ G + NPI+ + E+ FP + + +GYKEPTPIQ Q P ++ I
Sbjct: 376 FREDYNVTIKGGRIPNPIRSWNESGFPKEIIDIIDKVGYKEPTPIQRQAIPIGLQNRDII 435
Query: 511 GVXQTGS 531
GV +TGS
Sbjct: 436 GVAETGS 442
>AY051831-1|AAK93255.1| 703|Drosophila melanogaster LD33749p
protein.
Length = 703
Score = 59.7 bits (138), Expect = 3e-09
Identities = 36/103 (34%), Positives = 56/103 (54%), Gaps = 13/103 (12%)
Frame = +1
Query: 262 PFNKNFYDPHPTVLKRSPYEVEEYRNKH-EVTVSGV----------EVHNPIQYFEE--A 402
P KNFY P V + E+E R ++ ++TVS V + NP+ FE+ A
Sbjct: 230 PLTKNFYKEAPEVANLTKSEIERIREENNKITVSYVFEPKEGETSPPIPNPVWTFEQCFA 289
Query: 403 NFPDYVQQGVKTMGYKEPTPIQAQGWPDSYVWKEFIGVXQTGS 531
+PD +++ K MG+ +P+PIQ+Q WP + IG+ QTG+
Sbjct: 290 EYPDMLEEITK-MGFSKPSPIQSQAWPILLQGHDMIGIAQTGT 331
>BT016090-1|AAV36975.1| 1224|Drosophila melanogaster LD41277p
protein.
Length = 1224
Score = 58.0 bits (134), Expect = 9e-09
Identities = 29/91 (31%), Positives = 50/91 (54%), Gaps = 1/91 (1%)
Frame = +1
Query: 262 PFNKNFYDPHPTVLKRSPYEVEEYRNKHE-VTVSGVEVHNPIQYFEEANFPDYVQQGVKT 438
PF KNFY P + + + +VE+YR+ E + V G PI+ + + + ++
Sbjct: 468 PFRKNFYVEVPELTRMTAADVEKYRSDLEGIQVKGKGCPKPIKTWAQCGVSKKEMEVLRR 527
Query: 439 MGYKEPTPIQAQGWPDSYVWKEFIGVXQTGS 531
+G+++PTPIQ Q P ++ IG+ +TGS
Sbjct: 528 LGFEKPTPIQCQAIPAIMSGRDLIGIAKTGS 558
>AE014298-2134|AAF48446.1| 1224|Drosophila melanogaster CG6227-PA
protein.
Length = 1224
Score = 58.0 bits (134), Expect = 9e-09
Identities = 29/91 (31%), Positives = 50/91 (54%), Gaps = 1/91 (1%)
Frame = +1
Query: 262 PFNKNFYDPHPTVLKRSPYEVEEYRNKHE-VTVSGVEVHNPIQYFEEANFPDYVQQGVKT 438
PF KNFY P + + + +VE+YR+ E + V G PI+ + + + ++
Sbjct: 468 PFRKNFYVEVPELTRMTAADVEKYRSDLEGIQVKGKGCPKPIKTWAQCGVSKKEMEVLRR 527
Query: 439 MGYKEPTPIQAQGWPDSYVWKEFIGVXQTGS 531
+G+++PTPIQ Q P ++ IG+ +TGS
Sbjct: 528 LGFEKPTPIQCQAIPAIMSGRDLIGIAKTGS 558
>AY051752-1|AAK93176.1| 619|Drosophila melanogaster LD28839p
protein.
Length = 619
Score = 57.2 bits (132), Expect = 2e-08
Identities = 32/91 (35%), Positives = 44/91 (48%)
Frame = +1
Query: 259 QPFNKNFYDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKT 438
QP K + P + + S E E R++ + V G PI+ F E FP + G+
Sbjct: 136 QPI-KTAWKPPRYIREMSEEEREAVRHELRILVEGETPSPPIRSFREMKFPKGILNGLAA 194
Query: 439 MGYKEPTPIQAQGWPDSYVWKEFIGVXQTGS 531
G K PTPIQ QG P ++ IG+ TGS
Sbjct: 195 KGIKNPTPIQVQGLPTVLAGRDLIGIAFTGS 225
>AF212866-1|AAF19985.1| 619|Drosophila melanogaster abstrakt
protein protein.
Length = 619
Score = 57.2 bits (132), Expect = 2e-08
Identities = 32/91 (35%), Positives = 44/91 (48%)
Frame = +1
Query: 259 QPFNKNFYDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKT 438
QP K + P + + S E E R++ + V G PI+ F E FP + G+
Sbjct: 136 QPI-KTAWKPPRYIREMSEEEREAVRHELRILVEGETPSPPIRSFREMKFPKGILNGLAA 194
Query: 439 MGYKEPTPIQAQGWPDSYVWKEFIGVXQTGS 531
G K PTPIQ QG P ++ IG+ TGS
Sbjct: 195 KGIKNPTPIQVQGLPTVLAGRDLIGIAFTGS 225
>AF187729-1|AAF04040.1| 614|Drosophila melanogaster DEAD-box
protein abstrakt protein.
Length = 614
Score = 57.2 bits (132), Expect = 2e-08
Identities = 32/91 (35%), Positives = 44/91 (48%)
Frame = +1
Query: 259 QPFNKNFYDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKT 438
QP K + P + + S E E R++ + V G PI+ F E FP + G+
Sbjct: 131 QPI-KTAWKPPRYIREMSEEEREAVRHELRILVEGETPSPPIRSFREMKFPKGILNGLAA 189
Query: 439 MGYKEPTPIQAQGWPDSYVWKEFIGVXQTGS 531
G K PTPIQ QG P ++ IG+ TGS
Sbjct: 190 KGIKNPTPIQVQGLPTVLAGRDLIGIAFTGS 220
>AE014297-15|AAF52165.1| 619|Drosophila melanogaster CG14637-PA
protein.
Length = 619
Score = 57.2 bits (132), Expect = 2e-08
Identities = 32/91 (35%), Positives = 44/91 (48%)
Frame = +1
Query: 259 QPFNKNFYDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKT 438
QP K + P + + S E E R++ + V G PI+ F E FP + G+
Sbjct: 136 QPI-KTAWKPPRYIREMSEEEREAVRHELRILVEGETPSPPIRSFREMKFPKGILNGLAA 194
Query: 439 MGYKEPTPIQAQGWPDSYVWKEFIGVXQTGS 531
G K PTPIQ QG P ++ IG+ TGS
Sbjct: 195 KGIKNPTPIQVQGLPTVLAGRDLIGIAFTGS 225
>M23560-1|AAA29013.1| 648|Drosophila melanogaster protein (
D.melanogaster antigenMab46F11 (vasa) mRNA, complete
cds. ).
Length = 648
Score = 46.8 bits (106), Expect = 2e-05
Identities = 25/65 (38%), Positives = 33/65 (50%)
Frame = +1
Query: 337 NKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPDSYVWKEFIGV 516
N V V+G +V PIQ+F A+ D + V GYK PTPIQ P ++ +
Sbjct: 216 NNIPVKVTGSDVPQPIQHFTSADLRDIIIDNVNKSGYKIPTPIQKCSIPVISSGRDLMAC 275
Query: 517 XQTGS 531
QTGS
Sbjct: 276 AQTGS 280
>AE014134-2564|AAF53438.1| 661|Drosophila melanogaster CG3506-PA
protein.
Length = 661
Score = 46.8 bits (106), Expect = 2e-05
Identities = 25/65 (38%), Positives = 33/65 (50%)
Frame = +1
Query: 337 NKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPDSYVWKEFIGV 516
N V V+G +V PIQ+F A+ D + V GYK PTPIQ P ++ +
Sbjct: 229 NNIPVKVTGSDVPQPIQHFTSADLRDIIIDNVNKSGYKIPTPIQKCSIPVISSGRDLMAC 288
Query: 517 XQTGS 531
QTGS
Sbjct: 289 AQTGS 293
>X12945-1|CAA31405.1| 661|Drosophila melanogaster vasa protein.
Length = 661
Score = 45.2 bits (102), Expect = 7e-05
Identities = 24/65 (36%), Positives = 33/65 (50%)
Frame = +1
Query: 337 NKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPDSYVWKEFIGV 516
N V V+G +V PIQ+F A+ D + V G+K PTPIQ P ++ +
Sbjct: 229 NNIPVKVTGSDVPQPIQHFTSADLRDIIIDNVNKSGFKIPTPIQKCSIPVISSGRDLMAC 288
Query: 517 XQTGS 531
QTGS
Sbjct: 289 AQTGS 293
>AE014298-914|AAF46176.1| 438|Drosophila melanogaster CG14443-PA
protein.
Length = 438
Score = 45.2 bits (102), Expect = 7e-05
Identities = 22/70 (31%), Positives = 36/70 (51%), Gaps = 3/70 (4%)
Frame = +1
Query: 331 YRNKHEVTVSGVEVHN---PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPDSYVWK 501
YR +H +T++ + N P+ FE + F + Q ++ GY PTPIQAQ W + K
Sbjct: 11 YRKRHNITLTSWNMRNLPEPVLSFERSGFNATILQQLEDQGYDGPTPIQAQTWSIAKEGK 70
Query: 502 EFIGVXQTGS 531
+ + G+
Sbjct: 71 NIVMISGKGT 80
>BT004908-1|AAO49161.1| 782|Drosophila melanogaster LD15481p
protein.
Length = 782
Score = 36.7 bits (81), Expect = 0.024
Identities = 21/76 (27%), Positives = 35/76 (46%)
Frame = +1
Query: 304 KRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWP 483
K++ E EE + VE + I F + N + + + +GY PTPIQA P
Sbjct: 130 KKAGEEDEEDEGEKMQFADTVEANEQITSFYQMNLSRPLMRAIGVLGYIYPTPIQASTIP 189
Query: 484 DSYVWKEFIGVXQTGS 531
+ + ++ G TG+
Sbjct: 190 VALLGRDICGCAATGT 205
>AF181659-1|AAD55444.1| 641|Drosophila melanogaster BcDNA.GM05306
protein.
Length = 641
Score = 36.7 bits (81), Expect = 0.024
Identities = 21/76 (27%), Positives = 35/76 (46%)
Frame = +1
Query: 304 KRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWP 483
K++ E EE + VE + I F + N + + + +GY PTPIQA P
Sbjct: 130 KKAGEEDEEDEGEKMQFADTVEANEQITSFYQMNLSRPLMRAIGVLGYIYPTPIQASTIP 189
Query: 484 DSYVWKEFIGVXQTGS 531
+ + ++ G TG+
Sbjct: 190 VALLGRDICGCAATGT 205
>AE013599-611|AAF59119.1| 782|Drosophila melanogaster CG2173-PA
protein.
Length = 782
Score = 36.7 bits (81), Expect = 0.024
Identities = 21/76 (27%), Positives = 35/76 (46%)
Frame = +1
Query: 304 KRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWP 483
K++ E EE + VE + I F + N + + + +GY PTPIQA P
Sbjct: 130 KKAGEEDEEDEGEKMQFADTVEANEQITSFYQMNLSRPLMRAIGVLGYIYPTPIQASTIP 189
Query: 484 DSYVWKEFIGVXQTGS 531
+ + ++ G TG+
Sbjct: 190 VALLGRDICGCAATGT 205
>AE014296-2963|AAF49303.1| 594|Drosophila melanogaster CG5589-PA
protein.
Length = 594
Score = 33.5 bits (73), Expect = 0.22
Identities = 22/95 (23%), Positives = 39/95 (41%), Gaps = 4/95 (4%)
Frame = +1
Query: 259 QPFNKNFYDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYF----EEANFPDYVQQ 426
+P + P ++++ E E R ++ + V G V P+ F + +QQ
Sbjct: 73 KPKKEKTLSPKELEIQKAAEEANETRKQYGIRVLGKNVPPPVDSFGTLTRDFKMLPRLQQ 132
Query: 427 GVKTMGYKEPTPIQAQGWPDSYVWKEFIGVXQTGS 531
+ + + PTPIQ Q P + + TGS
Sbjct: 133 NLLSRNFDHPTPIQMQALPVLLQRRALMACAPTGS 167
>AY089613-1|AAL90351.1| 798|Drosophila melanogaster RE28061p
protein.
Length = 798
Score = 31.9 bits (69), Expect = 0.68
Identities = 16/61 (26%), Positives = 27/61 (44%)
Frame = +1
Query: 349 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPDSYVWKEFIGVXQTG 528
V +G V I F++ + ++ V Y +PTP+Q P ++ + QTG
Sbjct: 283 VEATGQNVPPNITSFDDVQLTEIIRNNVALARYDKPTPVQKHAIPIIINGRDLMACAQTG 342
Query: 529 S 531
S
Sbjct: 343 S 343
>AE014297-778|AAF54262.1| 798|Drosophila melanogaster CG9748-PA
protein.
Length = 798
Score = 31.9 bits (69), Expect = 0.68
Identities = 16/61 (26%), Positives = 27/61 (44%)
Frame = +1
Query: 349 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPDSYVWKEFIGVXQTG 528
V +G V I F++ + ++ V Y +PTP+Q P ++ + QTG
Sbjct: 283 VEATGQNVPPNITSFDDVQLTEIIRNNVALARYDKPTPVQKHAIPIIINGRDLMACAQTG 342
Query: 529 S 531
S
Sbjct: 343 S 343
>AY075397-1|AAL68229.1| 827|Drosophila melanogaster LD28101p
protein.
Length = 827
Score = 29.9 bits (64), Expect = 2.7
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +1
Query: 424 QGVKTMGYKEPTPIQAQGWPDSYVWKEFIGVXQTGS 531
+G+ GYK PTPIQ + P ++ + + +TGS
Sbjct: 52 KGITKRGYKVPTPIQRKTIPLILEGRDVVAMAKTGS 87
>AE014296-83|AAN11439.1| 827|Drosophila melanogaster CG32344-PA
protein.
Length = 827
Score = 29.9 bits (64), Expect = 2.7
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +1
Query: 424 QGVKTMGYKEPTPIQAQGWPDSYVWKEFIGVXQTGS 531
+G+ GYK PTPIQ + P ++ + + +TGS
Sbjct: 52 KGITKRGYKVPTPIQRKTIPLILEGRDVVAMAKTGS 87
>AE014134-1750|AAF52845.2| 1489|Drosophila melanogaster CG31755-PA
protein.
Length = 1489
Score = 29.9 bits (64), Expect = 2.7
Identities = 12/48 (25%), Positives = 21/48 (43%)
Frame = +1
Query: 340 KHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWP 483
KH V E NP+ ++E + + + + ++ P P Q WP
Sbjct: 475 KHLVLAHSPEPVNPVTSYKELPLGNTILNAMDDLNFQTPLPTQIYAWP 522
>AE014297-4128|AAF56713.2| 391|Drosophila melanogaster CG13976-PA
protein.
Length = 391
Score = 28.7 bits (61), Expect = 6.3
Identities = 16/36 (44%), Positives = 22/36 (61%), Gaps = 3/36 (8%)
Frame = -2
Query: 417 IIRKICFFKVL---NRIMNLNATYSYLVFISILFDF 319
IIR + F V NR + +NATYS LVF++ +F
Sbjct: 137 IIRWLIFIVVTIYSNRALTINATYSELVFLARFSEF 172
>U84552-1|AAC27683.1| 663|Drosophila melanogaster helicase
pitchoune protein.
Length = 663
Score = 28.3 bits (60), Expect = 8.4
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +1
Query: 424 QGVKTMGYKEPTPIQAQGWPDSYVWKEFIGVXQTGS 531
+ +K MG+ E T IQ++ ++ +G QTGS
Sbjct: 183 RAIKEMGFTEMTEIQSKSLTPLLKGRDLVGAAQTGS 218
>AY119620-1|AAM50274.1| 680|Drosophila melanogaster LD46167p
protein.
Length = 680
Score = 28.3 bits (60), Expect = 8.4
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +1
Query: 424 QGVKTMGYKEPTPIQAQGWPDSYVWKEFIGVXQTGS 531
+ +K MG+ E T IQ++ ++ +G QTGS
Sbjct: 200 RAIKEMGFTEMTEIQSKSLTPLLKGRDLVGAAQTGS 235
>AY071402-1|AAL49024.1| 680|Drosophila melanogaster RE48840p
protein.
Length = 680
Score = 28.3 bits (60), Expect = 8.4
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +1
Query: 424 QGVKTMGYKEPTPIQAQGWPDSYVWKEFIGVXQTGS 531
+ +K MG+ E T IQ++ ++ +G QTGS
Sbjct: 200 RAIKEMGFTEMTEIQSKSLTPLLKGRDLVGAAQTGS 235
>AF172635-1|AAD46928.1| 542|Drosophila melanogaster GM12270p
protein.
Length = 542
Score = 28.3 bits (60), Expect = 8.4
Identities = 13/44 (29%), Positives = 25/44 (56%)
Frame = +1
Query: 313 PYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMG 444
P+E + + KH++ V+ E + ++ +E+ F V+Q VK G
Sbjct: 255 PFEPPKPKTKHKLDVTSAEDYRALREYEQEKFTQMVKQ-VKDAG 297
>AE014297-3091|AAN13900.2| 680|Drosophila melanogaster CG6375-PB,
isoform B protein.
Length = 680
Score = 28.3 bits (60), Expect = 8.4
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +1
Query: 424 QGVKTMGYKEPTPIQAQGWPDSYVWKEFIGVXQTGS 531
+ +K MG+ E T IQ++ ++ +G QTGS
Sbjct: 200 RAIKEMGFTEMTEIQSKSLTPLLKGRDLVGAAQTGS 235
>AE014297-3090|AAF55951.2| 680|Drosophila melanogaster CG6375-PA,
isoform A protein.
Length = 680
Score = 28.3 bits (60), Expect = 8.4
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +1
Query: 424 QGVKTMGYKEPTPIQAQGWPDSYVWKEFIGVXQTGS 531
+ +K MG+ E T IQ++ ++ +G QTGS
Sbjct: 200 RAIKEMGFTEMTEIQSKSLTPLLKGRDLVGAAQTGS 235
>AE013599-1409|AAM71027.1| 512|Drosophila melanogaster CG8439-PB,
isoform B protein.
Length = 512
Score = 28.3 bits (60), Expect = 8.4
Identities = 13/44 (29%), Positives = 25/44 (56%)
Frame = +1
Query: 313 PYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMG 444
P+E + + KH++ V+ E + ++ +E+ F V+Q VK G
Sbjct: 225 PFEPPKPKTKHKLDVTSAEDYRALREYEQEKFTQMVKQ-VKDAG 267
>AE013599-1408|AAF58565.1| 542|Drosophila melanogaster CG8439-PA,
isoform A protein.
Length = 542
Score = 28.3 bits (60), Expect = 8.4
Identities = 13/44 (29%), Positives = 25/44 (56%)
Frame = +1
Query: 313 PYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMG 444
P+E + + KH++ V+ E + ++ +E+ F V+Q VK G
Sbjct: 255 PFEPPKPKTKHKLDVTSAEDYRALREYEQEKFTQMVKQ-VKDAG 297
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,430,330
Number of Sequences: 53049
Number of extensions: 505197
Number of successful extensions: 1507
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 1425
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1480
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2420893683
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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