Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0347.Seq
(598 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical pr... 64 5e-11
Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical pr... 62 3e-10
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 59 2e-09
AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical ... 53 2e-07
AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and bel... 46 2e-05
AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and bel... 46 2e-05
AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and bel... 46 2e-05
AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical... 46 2e-05
AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical ... 43 2e-04
AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical ... 40 0.001
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 36 0.022
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 36 0.022
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 36 0.022
AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 33 0.12
AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 33 0.12
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 31 0.47
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 31 0.47
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 31 0.47
AC091124-2|AAK27879.2| 1114|Caenorhabditis elegans Hypothetical ... 30 1.4
AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical... 30 1.4
Z99710-10|CAN99659.1| 222|Caenorhabditis elegans Hypothetical p... 29 1.9
AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical ... 29 2.5
AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical ... 29 2.5
Z68220-9|CAL64002.1| 312|Caenorhabditis elegans Hypothetical pr... 29 3.3
Z68220-8|CAA92487.1| 221|Caenorhabditis elegans Hypothetical pr... 29 3.3
U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical pr... 29 3.3
U93847-1|AAB58269.1| 760|Caenorhabditis elegans elongation fact... 28 4.4
U93846-1|AAB58268.1| 768|Caenorhabditis elegans elongation fact... 28 4.4
U10414-7|AAN63383.1| 768|Caenorhabditis elegans Elongation fact... 28 4.4
U10414-6|AAN63384.1| 760|Caenorhabditis elegans Elongation fact... 28 4.4
Z82079-1|CAB04949.1| 1529|Caenorhabditis elegans Hypothetical pr... 28 5.8
Z81103-2|CAB03213.1| 403|Caenorhabditis elegans Hypothetical pr... 28 5.8
Z81103-1|CAB03208.2| 457|Caenorhabditis elegans Hypothetical pr... 28 5.8
Z80344-7|CAB02491.1| 1529|Caenorhabditis elegans Hypothetical pr... 28 5.8
Z73098-7|CAA97341.1| 1215|Caenorhabditis elegans Hypothetical pr... 28 5.8
AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical ... 28 5.8
AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical ... 28 5.8
>U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical
protein F01F1.7 protein.
Length = 730
Score = 64.5 bits (150), Expect = 5e-11
Identities = 30/67 (44%), Positives = 41/67 (61%)
Frame = +1
Query: 331 YRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPDSYVWKEFI 510
+R +++ G V P++ +EEA FPD V Q VK +GY EPTPIQ Q P ++ I
Sbjct: 283 FREDFNISIKGGRVPRPLRNWEEAGFPDEVYQAVKEIGYLEPTPIQRQAIPIGLQNRDVI 342
Query: 511 GVXQTGS 531
GV +TGS
Sbjct: 343 GVAETGS 349
>Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical
protein C46F11.4 protein.
Length = 811
Score = 62.1 bits (144), Expect = 3e-10
Identities = 27/91 (29%), Positives = 49/91 (53%)
Frame = +1
Query: 259 QPFNKNFYDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKT 438
Q FNKNFY+ H + + +V +N + V G++ P+ F +F + + ++
Sbjct: 223 QKFNKNFYEEHEDIKRLHYMDVIRLQNTMNLRVGGLKPPRPVCSFAHFSFDKLLMEAIRK 282
Query: 439 MGYKEPTPIQAQGWPDSYVWKEFIGVXQTGS 531
Y++PTPIQA P + ++ +G+ +TGS
Sbjct: 283 SEYEQPTPIQAMAIPSALSGRDVLGIAKTGS 313
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 59.3 bits (137), Expect = 2e-09
Identities = 28/92 (30%), Positives = 52/92 (56%)
Frame = +1
Query: 256 LQPFNKNFYDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVK 435
L P K+FY + V +R YE++++ + ++VT+ G V P+ F EA P + + +
Sbjct: 87 LTPIEKDFYHENAAVSRREQYEIDQWVSANQVTLEGRGVPRPVFEFNEAPLPGQIHE-LL 145
Query: 436 TMGYKEPTPIQAQGWPDSYVWKEFIGVXQTGS 531
+++PT IQ+ WP + ++ I + +TGS
Sbjct: 146 YGKFQKPTVIQSISWPIAMSGRDIISIAKTGS 177
Score = 28.3 bits (60), Expect = 4.4
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +2
Query: 482 PIAMSGKNLLAXPKRVPGKNVGLHLASXCHI 574
PIAMSG+++++ K GK + L + HI
Sbjct: 161 PIAMSGRDIISIAKTGSGKTLAFMLPALVHI 191
>AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical
protein F53H1.1 protein.
Length = 970
Score = 52.8 bits (121), Expect = 2e-07
Identities = 28/90 (31%), Positives = 47/90 (52%), Gaps = 1/90 (1%)
Frame = +1
Query: 265 FNKNFYDPHPTVLKRSPYEVEEYRNKHE-VTVSGVEVHNPIQYFEEANFPDYVQQGVKTM 441
F KNFY + + + EV+ YR + + +TV G++ PI+ + + + +K
Sbjct: 263 FKKNFYIETEEIRRMTKAEVKAYREELDSITVKGIDCPKPIKTWAQCGVNLKMMNVLKKF 322
Query: 442 GYKEPTPIQAQGWPDSYVWKEFIGVXQTGS 531
Y +PT IQAQ P ++ IG+ +TGS
Sbjct: 323 EYSKPTSIQAQAIPSIMSGRDVIGIAKTGS 352
>AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform c protein.
Length = 660
Score = 46.4 bits (105), Expect = 2e-05
Identities = 25/69 (36%), Positives = 35/69 (50%)
Frame = +1
Query: 325 EEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPDSYVWKE 504
++Y N V VSG V I++F EA F V + V GY +PTP+Q P ++
Sbjct: 120 DKYENI-PVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRD 178
Query: 505 FIGVXQTGS 531
+ QTGS
Sbjct: 179 LMSCAQTGS 187
>AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform b protein.
Length = 644
Score = 46.4 bits (105), Expect = 2e-05
Identities = 25/69 (36%), Positives = 35/69 (50%)
Frame = +1
Query: 325 EEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPDSYVWKE 504
++Y N V VSG V I++F EA F V + V GY +PTP+Q P ++
Sbjct: 104 DKYENI-PVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRD 162
Query: 505 FIGVXQTGS 531
+ QTGS
Sbjct: 163 LMSCAQTGS 171
>AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform a protein.
Length = 641
Score = 46.4 bits (105), Expect = 2e-05
Identities = 25/69 (36%), Positives = 35/69 (50%)
Frame = +1
Query: 325 EEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPDSYVWKE 504
++Y N V VSG V I++F EA F V + V GY +PTP+Q P ++
Sbjct: 101 DKYENI-PVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRD 159
Query: 505 FIGVXQTGS 531
+ QTGS
Sbjct: 160 LMSCAQTGS 168
>AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical
protein Y71H2AM.19 protein.
Length = 643
Score = 46.0 bits (104), Expect = 2e-05
Identities = 19/61 (31%), Positives = 33/61 (54%)
Frame = +1
Query: 349 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPDSYVWKEFIGVXQTG 528
V +G +V PI F + + +++++ +KT GY PTP+Q P ++ + QTG
Sbjct: 154 VEATGDDVPQPISLFSDLSLHEWIEENIKTAGYDRPTPVQKYSIPALQGGRDLMSCAQTG 213
Query: 529 S 531
S
Sbjct: 214 S 214
>AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical
protein Y54G11A.3 protein.
Length = 504
Score = 42.7 bits (96), Expect = 2e-04
Identities = 31/103 (30%), Positives = 53/103 (51%), Gaps = 8/103 (7%)
Frame = +1
Query: 247 FCLLQPFNKNFYDPHPTVLKRSPYEVEE-YRNKHEVTV------SGVEVHNPIQYFEEAN 405
F ++P ++ Y SP +++E Y N + V S V++ P+ FE+A
Sbjct: 30 FSWMKPIVRDLYKIPNEQKNLSPEQLQELYTNGGVMKVYPFREESTVKIPPPVNSFEQAF 89
Query: 406 FPDYVQQG-VKTMGYKEPTPIQAQGWPDSYVWKEFIGVXQTGS 531
+ G ++ G+++P+PIQ+Q WP ++ IGV QTGS
Sbjct: 90 GSNASIMGEIRKNGFEKPSPIQSQMWPLLLSGQDCIGVSQTGS 132
>AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical
protein H27M09.1 protein.
Length = 630
Score = 40.3 bits (90), Expect = 0.001
Identities = 25/83 (30%), Positives = 40/83 (48%), Gaps = 1/83 (1%)
Frame = +1
Query: 286 PHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGV-KTMGYKEPTP 462
P + ++S + E R + ++ G + PI F E FP + + + K G PT
Sbjct: 156 PPGHIRRQSQEDYEIQRKRLGISCEGDHIPPPIGSFLEMKFPKSLLEFMQKQKGIVTPTA 215
Query: 463 IQAQGWPDSYVWKEFIGVXQTGS 531
IQ QG P + ++ IG+ TGS
Sbjct: 216 IQIQGIPVALSGRDMIGIASTGS 238
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 35.9 bits (79), Expect = 0.022
Identities = 18/51 (35%), Positives = 26/51 (50%)
Frame = +1
Query: 379 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPDSYVWKEFIGVXQTGS 531
P + F EAN + +Q+ V GY + TPIQ P + + + QTGS
Sbjct: 339 PCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGS 389
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 35.9 bits (79), Expect = 0.022
Identities = 18/51 (35%), Positives = 26/51 (50%)
Frame = +1
Query: 379 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPDSYVWKEFIGVXQTGS 531
P + F EAN + +Q+ V GY + TPIQ P + + + QTGS
Sbjct: 339 PCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGS 389
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 35.9 bits (79), Expect = 0.022
Identities = 18/51 (35%), Positives = 26/51 (50%)
Frame = +1
Query: 379 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPDSYVWKEFIGVXQTGS 531
P + F EAN + +Q+ V GY + TPIQ P + + + QTGS
Sbjct: 339 PCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGS 389
>AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA
helicase-3 protein.
Length = 720
Score = 33.5 bits (73), Expect = 0.12
Identities = 16/51 (31%), Positives = 26/51 (50%)
Frame = +1
Query: 379 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPDSYVWKEFIGVXQTGS 531
P + F +++ P +++ V+ GY TPIQ P K+ + QTGS
Sbjct: 296 PCKSFSDSDIPQSMRRNVERAGYTRTTPIQQYTLPLVADGKDILACAQTGS 346
>AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line
helicase protein 3 protein.
Length = 720
Score = 33.5 bits (73), Expect = 0.12
Identities = 16/51 (31%), Positives = 26/51 (50%)
Frame = +1
Query: 379 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPDSYVWKEFIGVXQTGS 531
P + F +++ P +++ V+ GY TPIQ P K+ + QTGS
Sbjct: 296 PCKSFSDSDIPQSMRRNVERAGYTRTTPIQQYTLPLVADGKDILACAQTGS 346
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 31.5 bits (68), Expect = 0.47
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = +1
Query: 391 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPDSYVWKEFIGVXQTGS 531
F EAN + +++ V GY + TPIQ P + + + QTGS
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGS 600
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 31.5 bits (68), Expect = 0.47
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = +1
Query: 391 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPDSYVWKEFIGVXQTGS 531
F EAN + +++ V GY + TPIQ P + + + QTGS
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGS 600
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 31.5 bits (68), Expect = 0.47
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = +1
Query: 391 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPDSYVWKEFIGVXQTGS 531
F EAN + +++ V GY + TPIQ P + + + QTGS
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGS 600
>AC091124-2|AAK27879.2| 1114|Caenorhabditis elegans Hypothetical
protein Y47A7.1 protein.
Length = 1114
Score = 29.9 bits (64), Expect = 1.4
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +1
Query: 7 PASERIHSLNKHLQLNPKNNHVW 75
PAS ++H L++ LQLN N+ W
Sbjct: 773 PASHQLHCLSRALQLNKANDSAW 795
>AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical
protein Y71G12B.8 protein.
Length = 763
Score = 29.9 bits (64), Expect = 1.4
Identities = 14/47 (29%), Positives = 21/47 (44%)
Frame = +1
Query: 391 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPDSYVWKEFIGVXQTGS 531
FE+ N + + GY +PTPIQ P + K+ TG+
Sbjct: 150 FEQMNLSRQILKACSGAGYSDPTPIQQACIPVALTGKDICACAATGT 196
>Z99710-10|CAN99659.1| 222|Caenorhabditis elegans Hypothetical
protein F08A8.8 protein.
Length = 222
Score = 29.5 bits (63), Expect = 1.9
Identities = 17/39 (43%), Positives = 22/39 (56%)
Frame = +3
Query: 93 VETVVPNLEEATNSAIIRLGLATVAIDLEDLEALVGKKN 209
+ETV+ LE N +RL A VA E LE++ GK N
Sbjct: 71 IETVILALEAGMNLEDVRLEFAHVATREEILESVFGKLN 109
>AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical
protein Y94H6A.5a protein.
Length = 825
Score = 29.1 bits (62), Expect = 2.5
Identities = 13/53 (24%), Positives = 26/53 (49%)
Frame = +1
Query: 373 HNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPDSYVWKEFIGVXQTGS 531
H +++ V + ++ G+ +PTPIQ + P K+ + + +TGS
Sbjct: 20 HKKAGGWQQIGLDHSVYKAIEKKGFNQPTPIQRKTIPCIMDGKDVVAMSRTGS 72
>AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical
protein Y94H6A.5b protein.
Length = 871
Score = 29.1 bits (62), Expect = 2.5
Identities = 13/53 (24%), Positives = 26/53 (49%)
Frame = +1
Query: 373 HNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPDSYVWKEFIGVXQTGS 531
H +++ V + ++ G+ +PTPIQ + P K+ + + +TGS
Sbjct: 20 HKKAGGWQQIGLDHSVYKAIEKKGFNQPTPIQRKTIPCIMDGKDVVAMSRTGS 72
>Z68220-9|CAL64002.1| 312|Caenorhabditis elegans Hypothetical
protein T20D3.5b protein.
Length = 312
Score = 28.7 bits (61), Expect = 3.3
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = -1
Query: 148 RRIIAEFVASSKFGTTVSTAIIPV 77
+++I +FVA S G T+STA P+
Sbjct: 220 QQLIGDFVAGSLLGATISTAFFPL 243
>Z68220-8|CAA92487.1| 221|Caenorhabditis elegans Hypothetical
protein T20D3.5a protein.
Length = 221
Score = 28.7 bits (61), Expect = 3.3
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = -1
Query: 148 RRIIAEFVASSKFGTTVSTAIIPV 77
+++I +FVA S G T+STA P+
Sbjct: 129 QQLIGDFVAGSLLGATISTAFFPL 152
>U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical
protein F55F8.2a protein.
Length = 746
Score = 28.7 bits (61), Expect = 3.3
Identities = 14/42 (33%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = +1
Query: 409 PDYVQQGVKTMGYKEPTPIQAQGWPDSY-VWKEFIGVXQTGS 531
P+ V + ++ MG+ EPT IQ+ P + ++ +G +TGS
Sbjct: 163 PNEVLEAIEQMGFSEPTEIQSAVLPAAVRDRQDVLGAAETGS 204
>U93847-1|AAB58269.1| 760|Caenorhabditis elegans elongation
factor-2 kinase EFK-1B isoform protein.
Length = 760
Score = 28.3 bits (60), Expect = 4.4
Identities = 18/78 (23%), Positives = 34/78 (43%)
Frame = -1
Query: 241 IWASHVLPSREFFFPTKASRSSKSIATVAKPRRIIAEFVASSKFGTTVSTAIIPVTRHDY 62
++ +H + + P + + KSI + E S G T ++ P+TRH+
Sbjct: 647 LYMAHAYETGQHLGPNRRTDYKKSIDWYQRVVGFQEEEELDSDCGKTTFSSFAPLTRHEI 706
Query: 61 FSDLVEDVYLNYGFFLTQ 8
+ + E +Y G+ L Q
Sbjct: 707 LAKMAE-MYKEGGYGLNQ 723
>U93846-1|AAB58268.1| 768|Caenorhabditis elegans elongation
factor-2 kinase EFK-1A isoform protein.
Length = 768
Score = 28.3 bits (60), Expect = 4.4
Identities = 18/78 (23%), Positives = 34/78 (43%)
Frame = -1
Query: 241 IWASHVLPSREFFFPTKASRSSKSIATVAKPRRIIAEFVASSKFGTTVSTAIIPVTRHDY 62
++ +H + + P + + KSI + E S G T ++ P+TRH+
Sbjct: 655 LYMAHAYETGQHLGPNRRTDYKKSIDWYQRVVGFQEEEELDSDCGKTTFSSFAPLTRHEI 714
Query: 61 FSDLVEDVYLNYGFFLTQ 8
+ + E +Y G+ L Q
Sbjct: 715 LAKMAE-MYKEGGYGLNQ 731
>U10414-7|AAN63383.1| 768|Caenorhabditis elegans Elongation factor
kinase protein1, isoform a protein.
Length = 768
Score = 28.3 bits (60), Expect = 4.4
Identities = 18/78 (23%), Positives = 34/78 (43%)
Frame = -1
Query: 241 IWASHVLPSREFFFPTKASRSSKSIATVAKPRRIIAEFVASSKFGTTVSTAIIPVTRHDY 62
++ +H + + P + + KSI + E S G T ++ P+TRH+
Sbjct: 655 LYMAHAYETGQHLGPNRRTDYKKSIDWYQRVVGFQEEEELDSDCGKTTFSSFAPLTRHEI 714
Query: 61 FSDLVEDVYLNYGFFLTQ 8
+ + E +Y G+ L Q
Sbjct: 715 LAKMAE-MYKEGGYGLNQ 731
>U10414-6|AAN63384.1| 760|Caenorhabditis elegans Elongation factor
kinase protein1, isoform b protein.
Length = 760
Score = 28.3 bits (60), Expect = 4.4
Identities = 18/78 (23%), Positives = 34/78 (43%)
Frame = -1
Query: 241 IWASHVLPSREFFFPTKASRSSKSIATVAKPRRIIAEFVASSKFGTTVSTAIIPVTRHDY 62
++ +H + + P + + KSI + E S G T ++ P+TRH+
Sbjct: 647 LYMAHAYETGQHLGPNRRTDYKKSIDWYQRVVGFQEEEELDSDCGKTTFSSFAPLTRHEI 706
Query: 61 FSDLVEDVYLNYGFFLTQ 8
+ + E +Y G+ L Q
Sbjct: 707 LAKMAE-MYKEGGYGLNQ 723
>Z82079-1|CAB04949.1| 1529|Caenorhabditis elegans Hypothetical
protein F15D4.1 protein.
Length = 1529
Score = 27.9 bits (59), Expect = 5.8
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +3
Query: 183 LEALVGKKNSLEGRTCDAQIGILFTPTFQQK 275
LEAL ++G+ D + +LF P FQ K
Sbjct: 470 LEALYESDGEIQGQRIDIAVQLLFIPFFQSK 500
>Z81103-2|CAB03213.1| 403|Caenorhabditis elegans Hypothetical
protein M04G12.1b protein.
Length = 403
Score = 27.9 bits (59), Expect = 5.8
Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
Frame = +1
Query: 286 PHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEAN---FPDYVQQGVKTMG 444
P PTVL SP+ V N +V H + +AN D +QQ ++++G
Sbjct: 144 PQPTVLPTSPFHVPTMNNLEQVL-----THQRLLQMTQANPRAVDDLIQQSLRSLG 194
>Z81103-1|CAB03208.2| 457|Caenorhabditis elegans Hypothetical
protein M04G12.1a protein.
Length = 457
Score = 27.9 bits (59), Expect = 5.8
Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
Frame = +1
Query: 286 PHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEAN---FPDYVQQGVKTMG 444
P PTVL SP+ V N +V H + +AN D +QQ ++++G
Sbjct: 171 PQPTVLPTSPFHVPTMNNLEQVL-----THQRLLQMTQANPRAVDDLIQQSLRSLG 221
>Z80344-7|CAB02491.1| 1529|Caenorhabditis elegans Hypothetical
protein F15D4.1 protein.
Length = 1529
Score = 27.9 bits (59), Expect = 5.8
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +3
Query: 183 LEALVGKKNSLEGRTCDAQIGILFTPTFQQK 275
LEAL ++G+ D + +LF P FQ K
Sbjct: 470 LEALYESDGEIQGQRIDIAVQLLFIPFFQSK 500
>Z73098-7|CAA97341.1| 1215|Caenorhabditis elegans Hypothetical
protein T21C9.6 protein.
Length = 1215
Score = 27.9 bits (59), Expect = 5.8
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +1
Query: 253 LLQPFNKNFYDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPI 384
LL+ FN+ Y+ PT L + +E+YR + + G+ NP+
Sbjct: 169 LLKSFNE-IYNDKPTALIENLKTIEKYRKGNVLNQMGLRHRNPL 211
>AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical
protein H20J04.4a protein.
Length = 488
Score = 27.9 bits (59), Expect = 5.8
Identities = 13/47 (27%), Positives = 23/47 (48%)
Frame = +1
Query: 391 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPDSYVWKEFIGVXQTGS 531
F + ++ Q ++TM K TP+QA P + +G +TG+
Sbjct: 91 FSQLGVCSWITQQLQTMQIKTATPVQAACIPKILEGSDILGCARTGT 137
>AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical
protein H20J04.4b protein.
Length = 561
Score = 27.9 bits (59), Expect = 5.8
Identities = 13/47 (27%), Positives = 23/47 (48%)
Frame = +1
Query: 391 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPDSYVWKEFIGVXQTGS 531
F + ++ Q ++TM K TP+QA P + +G +TG+
Sbjct: 91 FSQLGVCSWITQQLQTMQIKTATPVQAACIPKILEGSDILGCARTGT 137
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,772,808
Number of Sequences: 27780
Number of extensions: 270205
Number of successful extensions: 845
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 819
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 841
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1268802960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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