Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0346.Seq
         (598 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    65   2e-12
AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    65   2e-12
AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless male-spe...    65   2e-12
AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless female-s...    62   2e-11
AY391745-1|AAR28995.1|  460|Anopheles gambiae putative GPCR prot...    25   2.5  
AY263177-1|AAP78792.1|  699|Anopheles gambiae TmcC-like protein ...    24   3.2  
EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calc...    23   7.5  

>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 64.9 bits (151), Expect = 2e-12
 Identities = 31/54 (57%), Positives = 38/54 (70%), Gaps = 2/54 (3%)
 Frame = -1

Query: 190 SSDMG--SEHYCLRWNNHQSNLLGVFSQLLHDESLVDVTLACAEGASIRAHKVI 35
           S+D G   + YCLRWNNHQSNL  V + LL DE L DVTLAC +G  ++AH+ I
Sbjct: 43  STDTGIMDQQYCLRWNNHQSNLTTVLTTLLQDEKLCDVTLACEKG-MVKAHQAI 95


>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 64.9 bits (151), Expect = 2e-12
 Identities = 31/54 (57%), Positives = 38/54 (70%), Gaps = 2/54 (3%)
 Frame = -1

Query: 190 SSDMG--SEHYCLRWNNHQSNLLGVFSQLLHDESLVDVTLACAEGASIRAHKVI 35
           S+D G   + YCLRWNNHQSNL  V + LL DE L DVTLAC +G  ++AH+ I
Sbjct: 43  STDTGIMDQQYCLRWNNHQSNLTTVLTTLLQDEKLCDVTLACEKG-MVKAHQAI 95


>AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless
           male-specific zinc-fingerC isoform protein.
          Length = 569

 Score = 64.9 bits (151), Expect = 2e-12
 Identities = 31/54 (57%), Positives = 38/54 (70%), Gaps = 2/54 (3%)
 Frame = -1

Query: 190 SSDMG--SEHYCLRWNNHQSNLLGVFSQLLHDESLVDVTLACAEGASIRAHKVI 35
           S+D G   + YCLRWNNHQSNL  V + LL DE L DVTLAC +G  ++AH+ I
Sbjct: 43  STDTGIMDQQYCLRWNNHQSNLTTVLTTLLQDEKLCDVTLACEKG-MVKAHQAI 95


>AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless
           female-specific zinc-fingerC isoform protein.
          Length = 593

 Score = 61.7 bits (143), Expect = 2e-11
 Identities = 27/46 (58%), Positives = 33/46 (71%)
 Frame = -1

Query: 172 EHYCLRWNNHQSNLLGVFSQLLHDESLVDVTLACAEGASIRAHKVI 35
           + YCLRWNNHQ NL  V + LL DE L DVTLAC +G  ++AH+ I
Sbjct: 3   QQYCLRWNNHQPNLTTVLTTLLQDEKLCDVTLACEKG-MVKAHQAI 47


>AY391745-1|AAR28995.1|  460|Anopheles gambiae putative GPCR
           protein.
          Length = 460

 Score = 24.6 bits (51), Expect = 2.5
 Identities = 12/24 (50%), Positives = 16/24 (66%)
 Frame = +3

Query: 222 GINIVL*TCINSYSSNRAVIESFR 293
           GIN +L  CI+  +  +AVIE FR
Sbjct: 371 GINFIL-YCISGQNFRKAVIEMFR 393


>AY263177-1|AAP78792.1|  699|Anopheles gambiae TmcC-like protein
           protein.
          Length = 699

 Score = 24.2 bits (50), Expect = 3.2
 Identities = 15/58 (25%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
 Frame = -3

Query: 437 IIK*VVYSLISPFYVFVIVIQSIIGFH*-FLIILNDFVGDIHISRPVSLSKAFNNRSI 267
           ++K +   ++    VFVI++ + I  +  F + L +   +   S PVS S+   NR++
Sbjct: 141 MLKLIAIRMLVNLVVFVILLLAAITIYVLFNVSLAELEPNFTPSHPVSFSEGIGNRTL 198


>EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calcium
           channel alpha2-delta subunit 1 protein.
          Length = 1256

 Score = 23.0 bits (47), Expect = 7.5
 Identities = 9/13 (69%), Positives = 11/13 (84%)
 Frame = +2

Query: 209 SVTNRHKYSSVDL 247
           S T +HKY+SVDL
Sbjct: 562 SATLKHKYNSVDL 574


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 578,170
Number of Sequences: 2352
Number of extensions: 10191
Number of successful extensions: 16
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 57609459
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)