Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0345.Seq
(598 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_45540| Best HMM Match : HSP70 (HMM E-Value=0) 157 6e-39
SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.) 147 5e-36
SB_8490| Best HMM Match : HSP70 (HMM E-Value=0) 133 9e-32
SB_45647| Best HMM Match : HSP70 (HMM E-Value=0) 119 2e-27
SB_38725| Best HMM Match : No HMM Matches (HMM E-Value=.) 71 9e-13
SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.043
SB_2840| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.40
SB_17273| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.71
SB_6748| Best HMM Match : Pkinase (HMM E-Value=1.7e-05) 31 0.71
SB_57319| Best HMM Match : Pox_A_type_inc (HMM E-Value=6.3e-06) 31 0.71
SB_40385| Best HMM Match : Kelch_1 (HMM E-Value=0) 31 0.71
SB_15994| Best HMM Match : Pox_A_type_inc (HMM E-Value=2e-06) 31 0.71
SB_45987| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.93
SB_28981| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.93
SB_23345| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.2
SB_2026| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.2
SB_45236| Best HMM Match : PRP38 (HMM E-Value=0) 30 1.2
SB_35674| Best HMM Match : SH2 (HMM E-Value=0) 30 1.2
SB_56522| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.6e-30) 30 1.6
SB_39770| Best HMM Match : TolA (HMM E-Value=0.33) 30 1.6
SB_23940| Best HMM Match : MuDR (HMM E-Value=0.24) 30 1.6
SB_54309| Best HMM Match : SH2 (HMM E-Value=5.1e-17) 30 1.6
SB_52390| Best HMM Match : Cauli_DNA-bind (HMM E-Value=6.4) 30 1.6
SB_42837| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.6
SB_23775| Best HMM Match : Tropomyosin (HMM E-Value=0) 30 1.6
SB_3809| Best HMM Match : DUF1014 (HMM E-Value=8.7e-09) 29 2.2
SB_10624| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.2
SB_59386| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.9
SB_22350| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.8
SB_46225| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.00052) 29 3.8
SB_49603| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.0
SB_44922| Best HMM Match : RNA_pol_Rpb1_1 (HMM E-Value=0) 28 5.0
SB_44787| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.0
SB_32331| Best HMM Match : DivIVA (HMM E-Value=0.86) 28 5.0
SB_7623| Best HMM Match : SURF6 (HMM E-Value=2.6) 28 5.0
SB_26915| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.0
SB_24447| Best HMM Match : TolA (HMM E-Value=1.3) 28 5.0
SB_23774| Best HMM Match : Kinesin (HMM E-Value=0) 28 5.0
SB_2434| Best HMM Match : Vicilin_N (HMM E-Value=0.01) 28 5.0
SB_54892| Best HMM Match : DHH (HMM E-Value=0.057) 28 6.6
SB_40334| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.6
SB_50337| Best HMM Match : Extensin_1 (HMM E-Value=0.19) 28 6.6
SB_20161| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.6
SB_11774| Best HMM Match : M (HMM E-Value=8.5e-09) 28 6.6
SB_43252| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.7
SB_28185| Best HMM Match : FIVAR (HMM E-Value=2.2) 27 8.7
SB_12264| Best HMM Match : Filament (HMM E-Value=0.0075) 27 8.7
SB_51415| Best HMM Match : zf-CCCH (HMM E-Value=1.1) 27 8.7
SB_44544| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.7
SB_23299| Best HMM Match : zf-C3HC4 (HMM E-Value=5.9e-06) 27 8.7
SB_20481| Best HMM Match : Pox_A_type_inc (HMM E-Value=5.60519e-45) 27 8.7
SB_18255| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.7
SB_8472| Best HMM Match : TatC (HMM E-Value=1.4) 27 8.7
SB_3240| Best HMM Match : Sec8_exocyst (HMM E-Value=0.48) 27 8.7
>SB_45540| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1097
Score = 157 bits (381), Expect = 6e-39
Identities = 77/113 (68%), Positives = 91/113 (80%)
Frame = -3
Query: 590 GKFXX*PGIPPAPRGVPQI*GHLXHRCXGILNVSAIXKSTNKEXKITITNDKGRLSKEEI 411
GKF GIPPAPRGVPQI GILNVSA+ KST KE KITITNDKGRLSKE+I
Sbjct: 459 GKFEL-TGIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGKENKITITNDKGRLSKEDI 517
Query: 410 ERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKR 252
ERMVNEA KY+ ED+KQ++ IQ KN+LESY +SMKST+ED+K+K+KIS+ DK+
Sbjct: 518 ERMVNEASKYKEEDEKQRDRIQTKNSLESYAYSMKSTVEDDKVKDKISEEDKK 570
Score = 70.9 bits (166), Expect = 7e-13
Identities = 28/46 (60%), Positives = 39/46 (84%)
Frame = -2
Query: 258 QETILDKCNDTIKWLDSNQLADKEEYEHKQKELEGIYNPIITKMYQ 121
++ ILDKC + +KWLD+NQ A+K+E+E+ QKELE + NPIITK+YQ
Sbjct: 569 KKAILDKCTEVLKWLDTNQTAEKDEFEYHQKELEKVCNPIITKLYQ 614
>SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 746
Score = 147 bits (357), Expect = 5e-36
Identities = 74/112 (66%), Positives = 88/112 (78%)
Frame = -3
Query: 590 GKFXX*PGIPPAPRGVPQI*GHLXHRCXGILNVSAIXKSTNKEXKITITNDKGRLSKEEI 411
GKF GIPPAPRGVPQI GILNVSA+ KST KE KITITNDKGRLSKE+I
Sbjct: 551 GKFEL-SGIPPAPRGVPQIDVTFDVDSNGILNVSAVDKSTGKENKITITNDKGRLSKEDI 609
Query: 410 ERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDK 255
ERMV EAEK++ D+ +E IQ+KN+LESY FSMKSTMEDEK+K+K+S+ ++
Sbjct: 610 ERMVKEAEKFKAADEAVRERIQSKNSLESYAFSMKSTMEDEKVKDKLSEDER 661
Score = 62.5 bits (145), Expect = 3e-10
Identities = 25/46 (54%), Positives = 35/46 (76%)
Frame = -2
Query: 258 QETILDKCNDTIKWLDSNQLADKEEYEHKQKELEGIYNPIITKMYQ 121
+E ++ +C T+ WL+ NQ A+KEE + QKELEG+ NPIITK+YQ
Sbjct: 661 REKVISRCKATLDWLEHNQSAEKEEIDAHQKELEGVCNPIITKLYQ 706
>SB_8490| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 640
Score = 133 bits (322), Expect = 9e-32
Identities = 68/112 (60%), Positives = 81/112 (72%)
Frame = -3
Query: 590 GKFXX*PGIPPAPRGVPQI*GHLXHRCXGILNVSAIXKSTNKEXKITITNDKGRLSKEEI 411
GKF GIPPAPRGVPQI GILNVSA KST K ITITNDKGRLSKEEI
Sbjct: 458 GKFDL-SGIPPAPRGVPQIEVTFDIDANGILNVSAKDKSTGKTGSITITNDKGRLSKEEI 516
Query: 410 ERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDK 255
+RM+N+AEKY++ED+ Q+E I A+N LESY F +KS + + L+ K+S SDK
Sbjct: 517 DRMINDAEKYKSEDEAQREKIAARNRLESYAFGVKSAISEPSLEGKLSQSDK 568
Score = 49.6 bits (113), Expect = 2e-06
Identities = 17/45 (37%), Positives = 34/45 (75%)
Frame = -2
Query: 258 QETILDKCNDTIKWLDSNQLADKEEYEHKQKELEGIYNPIITKMY 124
++T+ +K + + WL+ N LA+KEE+E ++KEL+ + +PI+ K++
Sbjct: 568 KDTVKNKVEEVLNWLEKNSLAEKEEFEEQEKELQRVCSPIMAKVH 612
>SB_45647| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1327
Score = 119 bits (286), Expect = 2e-27
Identities = 63/114 (55%), Positives = 80/114 (70%), Gaps = 1/114 (0%)
Frame = -3
Query: 590 GKFXX*PGIPPAPRGVPQI*GHLXHRCXGILNVSAIXKSTNKEXKITITNDKGRLSKEEI 411
GKF GIPPAPRGVPQI GIL VSA K T + KITITND+ RL+ E+I
Sbjct: 1152 GKFDL-NGIPPAPRGVPQIEVTFEIDVNGILRVSAEDKGTGNKEKITITNDQNRLTPEDI 1210
Query: 410 ERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMED-EKLKEKISDSDKR 252
ERMVN+AEK+ +ED K KE ++A+N LESY +S+K+ + D EKL K+S+ DK+
Sbjct: 1211 ERMVNDAEKFADEDKKTKEKVEARNELESYAYSLKNQVGDKEKLGGKLSEDDKK 1264
Score = 31.9 bits (69), Expect = 0.40
Identities = 11/39 (28%), Positives = 25/39 (64%)
Frame = -2
Query: 258 QETILDKCNDTIKWLDSNQLADKEEYEHKQKELEGIYNP 142
++TI + I W+D NQ A E+++ ++++ + +Y+P
Sbjct: 1263 KKTITEAVEKAISWMDKNQDASVEDFKKEKRKWKMLYSP 1301
>SB_38725| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 766
Score = 70.5 bits (165), Expect = 9e-13
Identities = 40/80 (50%), Positives = 50/80 (62%)
Frame = -3
Query: 569 GIPPAPRGVPQI*GHLXHRCXGILNVSAIXKSTNKEXKITITNDKGRLSKEEIERMVNEA 390
GIPPAPRGVPQ+ GI+NVSA K T +E +I I + G LSK+ IE M+ EA
Sbjct: 269 GIPPAPRGVPQVEVTFDIDANGIVNVSARDKGTGREQQIVIQSSGG-LSKDAIENMIKEA 327
Query: 389 EKYRNEDDKQKETIQAKNAL 330
EKY E DKQK+ + K +
Sbjct: 328 EKYA-EADKQKKVEKLKEEI 346
>SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1019
Score = 35.1 bits (77), Expect = 0.043
Identities = 26/107 (24%), Positives = 44/107 (41%), Gaps = 1/107 (0%)
Frame = -3
Query: 479 KSTNKEXKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKST 300
K E K ++ K++ + E + DD + +AKNALES+ F ++
Sbjct: 674 KKEGDESKSEGKKEEPTADKDKKAEKADGKEAPKARDDAKAANERAKNALESHIFGVRDE 733
Query: 299 MEDEKLKEKISDSDKRXXXXXXXXXXSGWI-PTSWPTRRSMSTSRKN 162
M E L EK+S +R S W+ W + ++ + N
Sbjct: 734 MNSE-LGEKLSTEAERETISEALTAASDWLDEDGWDSTANVYNEKLN 779
>SB_2840| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2248
Score = 31.9 bits (69), Expect = 0.40
Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 2/51 (3%)
Frame = -3
Query: 479 KSTNKEXKITITNDKGRLSKEEIER--MVNEAEKYRNEDDKQKETIQAKNA 333
K+T+K + ITN G++ KEE +R V E++K K++E I+ K A
Sbjct: 1135 KATSKLQEEEITNAMGKIEKEEAKRKAAVEESQKAIEAARKKQEEIRQKQA 1185
>SB_17273| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 58
Score = 31.1 bits (67), Expect = 0.71
Identities = 12/38 (31%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
Frame = -2
Query: 237 CNDTIKWLDSN-QLADKEEYEHKQKELEGIYNPIITKM 127
C++ +WL++N A EE ++++L G+ PI++K+
Sbjct: 7 CDEKSEWLENNADTASLEEIVKQKEDLAGVLQPILSKL 44
>SB_6748| Best HMM Match : Pkinase (HMM E-Value=1.7e-05)
Length = 315
Score = 31.1 bits (67), Expect = 0.71
Identities = 20/75 (26%), Positives = 40/75 (53%)
Frame = -3
Query: 491 SAIXKSTNKEXKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFS 312
S++ S NK+ K+ K ++ K+++++ E ++ DDK KET+ N +ES
Sbjct: 212 SSMKLSKNKKKKMK-KKLKKQIEKQKLQQDEIEQGLLQDSDDKDKETL-GDNCIESNDME 269
Query: 311 MKSTMEDEKLKEKIS 267
+ E++ E++S
Sbjct: 270 ESAKDSSEEISEELS 284
>SB_57319| Best HMM Match : Pox_A_type_inc (HMM E-Value=6.3e-06)
Length = 348
Score = 31.1 bits (67), Expect = 0.71
Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Frame = -3
Query: 458 KITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKN-ALESYCFSMKSTMEDEK 285
++T D G + EE++R+ NE EK +NE + K+ L++Y + E EK
Sbjct: 126 QLTSKADYGNIHAEELQRIRNELEKCKNEISDLNSKLNTKSQKLKTYKKHIGELQEREK 184
>SB_40385| Best HMM Match : Kelch_1 (HMM E-Value=0)
Length = 823
Score = 31.1 bits (67), Expect = 0.71
Identities = 12/38 (31%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
Frame = -2
Query: 237 CNDTIKWLDSN-QLADKEEYEHKQKELEGIYNPIITKM 127
C++ +WL++N A EE ++++L G+ PI++K+
Sbjct: 772 CDEKSEWLENNADTASLEEIVKQKEDLAGVLQPILSKL 809
>SB_15994| Best HMM Match : Pox_A_type_inc (HMM E-Value=2e-06)
Length = 364
Score = 31.1 bits (67), Expect = 0.71
Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Frame = -3
Query: 458 KITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKN-ALESYCFSMKSTMEDEK 285
++T D G + EE++R+ NE EK +NE + K+ L++Y + E EK
Sbjct: 126 QLTSKADYGNIHAEELQRIRNELEKCKNEISDLNSKLNTKSQKLKTYKKHIGELQEREK 184
>SB_45987| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1339
Score = 30.7 bits (66), Expect = 0.93
Identities = 15/62 (24%), Positives = 34/62 (54%)
Frame = -3
Query: 458 KITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLK 279
K+ I +D G L ++ N+ +K + E+D+ +E + E++ SM+ + D++ +
Sbjct: 975 KVKIYDDDGDLKVSKLTGFFNDDDKEKEEEDRAEECEET----EAHIISMQEEVNDDETE 1030
Query: 278 EK 273
E+
Sbjct: 1031 EE 1032
>SB_28981| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 655
Score = 30.7 bits (66), Expect = 0.93
Identities = 15/41 (36%), Positives = 26/41 (63%)
Frame = -3
Query: 449 ITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALE 327
+ +K RL EE+ER+ E +K E+ K++ET++ K L+
Sbjct: 277 LEEEKKRL--EELERLKEEKDKMLEEELKKRETLEEKQKLQ 315
>SB_23345| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 903
Score = 30.3 bits (65), Expect = 1.2
Identities = 20/72 (27%), Positives = 33/72 (45%)
Frame = -3
Query: 467 KEXKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDE 288
KE K ++ +EE ER E K E+ KQ+E + K E + E+E
Sbjct: 433 KERKKREAEEEEERRREEEERREEEERKREEEERKQREEEEKKREEEE-----RKQREEE 487
Query: 287 KLKEKISDSDKR 252
+ K+K + +K+
Sbjct: 488 ERKQKEKEEEKK 499
>SB_2026| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1789
Score = 30.3 bits (65), Expect = 1.2
Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 4/78 (5%)
Frame = -3
Query: 479 KSTNKEXKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQA-KNALES---YCFS 312
K +++ K DKG K++ E ++ E +++ + +KE Q+ K ES C S
Sbjct: 1513 KGESEKDKGESEKDKGESEKDKGESEKDKGESEKDKGESEKEKCQSEKEKCESEKEKCES 1572
Query: 311 MKSTMEDEKLKEKISDSD 258
K E EK E+ D +
Sbjct: 1573 EKEKCESEKKVEESKDEN 1590
Score = 29.1 bits (62), Expect = 2.9
Identities = 17/73 (23%), Positives = 35/73 (47%)
Frame = -3
Query: 479 KSTNKEXKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKST 300
K +++ K DKG KE+ + + E + + + +KE +++ +E K
Sbjct: 1534 KGESEKDKGESEKDKGESEKEKCQSEKEKCESEKEKCESEKEKCESEKKVE----ESKDE 1589
Query: 299 MEDEKLKEKISDS 261
+EK++EK D+
Sbjct: 1590 NPEEKIEEKKDDT 1602
>SB_45236| Best HMM Match : PRP38 (HMM E-Value=0)
Length = 381
Score = 30.3 bits (65), Expect = 1.2
Identities = 13/41 (31%), Positives = 19/41 (46%)
Frame = -2
Query: 531 RSPXTSMPRYPQRFRYRXVHQQGXQDHHYQRQRSSLQGRDR 409
R P PR +R RYR + + +D + R R + R R
Sbjct: 275 RDPDRDRPRDSERDRYRDIERDRHRDRRHSRDRDRKRSRSR 315
>SB_35674| Best HMM Match : SH2 (HMM E-Value=0)
Length = 871
Score = 30.3 bits (65), Expect = 1.2
Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 4/78 (5%)
Frame = -3
Query: 479 KSTNKEXKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQA-KNALES---YCFS 312
K +++ K DKG K++ E ++ E +++ + +KE Q+ K ES C S
Sbjct: 92 KGESEKDKGESEKDKGESEKDKGESEKDKGESEKDKGESEKEKCQSEKEKCESEKEKCES 151
Query: 311 MKSTMEDEKLKEKISDSD 258
K E EK E+ D +
Sbjct: 152 EKEKCESEKKVEESKDEN 169
Score = 29.1 bits (62), Expect = 2.9
Identities = 17/73 (23%), Positives = 35/73 (47%)
Frame = -3
Query: 479 KSTNKEXKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKST 300
K +++ K DKG KE+ + + E + + + +KE +++ +E K
Sbjct: 113 KGESEKDKGESEKDKGESEKEKCQSEKEKCESEKEKCESEKEKCESEKKVE----ESKDE 168
Query: 299 MEDEKLKEKISDS 261
+EK++EK D+
Sbjct: 169 NPEEKIEEKKDDT 181
>SB_56522| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.6e-30)
Length = 3071
Score = 29.9 bits (64), Expect = 1.6
Identities = 19/64 (29%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Frame = -3
Query: 479 KSTNKEXKITITNDKGRLSKEEIERMVNEAE-KYRNEDDKQKETIQAKNALESYCFSMKS 303
K+ + KI + N+ + SKE++ER V AE + R+ D + K +++LE S
Sbjct: 1032 KTRRQLNKILVENENLKGSKEDLERRVVVAENRLRDTDSEMKGWRDIRSSLERDLQSRDH 1091
Query: 302 TMED 291
+++D
Sbjct: 1092 SIDD 1095
>SB_39770| Best HMM Match : TolA (HMM E-Value=0.33)
Length = 732
Score = 29.9 bits (64), Expect = 1.6
Identities = 24/84 (28%), Positives = 37/84 (44%), Gaps = 2/84 (2%)
Frame = -3
Query: 500 LNVSAIXKSTNKEXKITITNDKGRLSKEEIERMVNEAEKYRNEDDK--QKETIQAKNALE 327
L SA+ TNK+ + + R+ E ER+ E K E K QKE AK LE
Sbjct: 176 LRRSAMDAGTNKKVEEEERLTRARIQAEAAERLAKEVTKTLEELRKTMQKELEDAKVKLE 235
Query: 326 SYCFSMKSTMEDEKLKEKISDSDK 255
+++ KE+ S+ ++
Sbjct: 236 QEKKDSVKKLKERLEKERESEEER 259
>SB_23940| Best HMM Match : MuDR (HMM E-Value=0.24)
Length = 685
Score = 29.9 bits (64), Expect = 1.6
Identities = 15/62 (24%), Positives = 33/62 (53%)
Frame = -3
Query: 458 KITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLK 279
K+ I +D G L ++ N+ +K E+D+ +E + E++ SM+ + D++ +
Sbjct: 448 KVKIYDDDGDLKVSKLTGFFNDDDKEEEEEDRAEECEET----EAHIISMQEEVNDDETE 503
Query: 278 EK 273
E+
Sbjct: 504 EE 505
>SB_54309| Best HMM Match : SH2 (HMM E-Value=5.1e-17)
Length = 1249
Score = 29.9 bits (64), Expect = 1.6
Identities = 18/62 (29%), Positives = 35/62 (56%)
Frame = -3
Query: 440 DKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDS 261
++ + KEE ER+ EAE+ R ED++Q+ + + A E +K M+ K + + ++
Sbjct: 411 EEEKRQKEEEERLRVEAERQREEDERQRAEDERQRA-EDERQRVKHEMQRLKDERRRAEE 469
Query: 260 DK 255
D+
Sbjct: 470 DE 471
Score = 29.9 bits (64), Expect = 1.6
Identities = 35/144 (24%), Positives = 54/144 (37%), Gaps = 4/144 (2%)
Frame = -3
Query: 422 KEEIERMVNEAEKYRNEDDKQKET-IQAKNALESYCFSMKSTMEDEKLKEKISDSDKRXX 246
K + E+ E E E ++ +E I K E K E KL+E S+K+
Sbjct: 596 KRKEEKAQRERELIEQEKNRAREIYISLKRVREQV--KQKEAEEQRKLEEAWQRSEKKAK 653
Query: 245 XXXXXXXXSGWIPTSWPTR-RSMSTSRKNW--KAFTIR*LRRCTRVPEESPEVCRASRAE 75
S I S R R+++ R+N + I ++P + V + SRA
Sbjct: 654 EAERDRRNSVSIARSEVLRERALAAKRRNTMGQKIVIEAPHTPPQIPTRTGSVNKPSRAP 713
Query: 74 HPEPEVPPPGLEALAPPSRRSIKP 3
P P P P + +S P
Sbjct: 714 PPVPNHPSPAVPLRREGDTKSFAP 737
Score = 27.5 bits (58), Expect = 8.7
Identities = 17/68 (25%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Frame = -3
Query: 446 TNDKGRLSKEE---IERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKE 276
T ++ R ++EE I R EAE+ R E +++++ + +ALE C + + ++K
Sbjct: 508 TEERERQAREEEDRIRREREEAERLRREKEQREQLVPHSDALE--CAIKPLNLLEARIKA 565
Query: 275 KISDSDKR 252
+ + ++R
Sbjct: 566 QKLEEEQR 573
>SB_52390| Best HMM Match : Cauli_DNA-bind (HMM E-Value=6.4)
Length = 232
Score = 29.9 bits (64), Expect = 1.6
Identities = 15/62 (24%), Positives = 33/62 (53%)
Frame = -3
Query: 458 KITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLK 279
K+ I +D G L ++ N+ +K E+D+ +E + E++ SM+ + D++ +
Sbjct: 87 KVKIYDDDGDLKVSKLTGFFNDDDKEEEEEDRAEECEET----EAHIISMQEEVNDDETE 142
Query: 278 EK 273
E+
Sbjct: 143 EE 144
>SB_42837| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 131
Score = 29.9 bits (64), Expect = 1.6
Identities = 16/53 (30%), Positives = 31/53 (58%)
Frame = -3
Query: 479 KSTNKEXKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESY 321
++ N+E KI T +K + +E+IE E + NE+++++ET + + E Y
Sbjct: 71 EAENEEEKIEET-EKEKDEEEKIEEEEKEGGEEENEEEEEEETEEEEEKEEEY 122
>SB_23775| Best HMM Match : Tropomyosin (HMM E-Value=0)
Length = 442
Score = 29.9 bits (64), Expect = 1.6
Identities = 23/73 (31%), Positives = 36/73 (49%), Gaps = 2/73 (2%)
Frame = -3
Query: 485 IXKSTNKEXKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQK--ETIQAKNALESYCFS 312
+ K KE K +K RL K++ E +K + E++K+K E I AK +
Sbjct: 355 LEKQAEKEKK-----EKERLEKKQREEKDRLEKKEKKEEEKRKKEEEINAKIEEKKKREE 409
Query: 311 MKSTMEDEKLKEK 273
K E+EK+K+K
Sbjct: 410 KKKQEEEEKMKKK 422
Score = 28.7 bits (61), Expect = 3.8
Identities = 17/50 (34%), Positives = 27/50 (54%)
Frame = -3
Query: 422 KEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEK 273
K+E ER+ +AEK + K+KE ++ K E K E+EK K++
Sbjct: 349 KKEQERLEKQAEK----EKKEKERLEKKQREEKDRLEKKEKKEEEKRKKE 394
>SB_3809| Best HMM Match : DUF1014 (HMM E-Value=8.7e-09)
Length = 265
Score = 29.5 bits (63), Expect = 2.2
Identities = 16/63 (25%), Positives = 33/63 (52%)
Frame = -3
Query: 440 DKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDS 261
+K R +EE +++ + +K+ ++ K+ E ++ KNA E++ LK K S+S
Sbjct: 50 EKERKEREEEDKLWEDDDKHEQQEKKRLEALERKNAARQML-----EEEEKSLKGKTSNS 104
Query: 260 DKR 252
+
Sbjct: 105 SAK 107
>SB_10624| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2193
Score = 29.5 bits (63), Expect = 2.2
Identities = 20/60 (33%), Positives = 30/60 (50%)
Frame = -3
Query: 440 DKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDS 261
DK +L KEE E+ + E NE KQKE +A++ L++ + D K E D+
Sbjct: 1606 DKYQLEKEEAEKRLQSYEDELNEKQKQKE--KAEDNLKALKKRISDLEVDNKNLETARDN 1663
>SB_59386| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1037
Score = 29.1 bits (62), Expect = 2.9
Identities = 15/41 (36%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Frame = -3
Query: 446 TNDKGRLSKEEIERMVNEAEKY-RNEDDKQKETIQAKNALE 327
TND G S +E E VN ++K NE++ + E ++ +N++E
Sbjct: 888 TNDNGS-STDEAESEVNNSDKEGENEENDEVEDMEVENSIE 927
>SB_22350| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1967
Score = 28.7 bits (61), Expect = 3.8
Identities = 18/51 (35%), Positives = 28/51 (54%)
Frame = -3
Query: 428 LSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKE 276
L ++ +VNE +K + + D QK+ I+ + ES + ME EKLKE
Sbjct: 1182 LKAARLKELVNELDKMKKDLDAQKQAIEESRSEES---GIIGEME-EKLKE 1228
>SB_46225| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.00052)
Length = 649
Score = 28.7 bits (61), Expect = 3.8
Identities = 16/41 (39%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Frame = -3
Query: 422 KEEIERMVNEAEKYRNEDDK-QKETIQAKNALESYCFSMKS 303
KE+I+ NEA++ + DK +KE +KN LES +K+
Sbjct: 2 KEDIQVRSNEAQREARKKDKLEKELKTSKNDLESKTAELKT 42
>SB_49603| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 208
Score = 28.3 bits (60), Expect = 5.0
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = -3
Query: 470 NKEXKITITNDKGRLSKEEIERMVNEAEKYRNEDDK 363
NKE K + DKG K ++E EKY E+DK
Sbjct: 72 NKE-KYDLEEDKGNKEKYDLEEDKGNKEKYDLEEDK 106
Score = 28.3 bits (60), Expect = 5.0
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = -3
Query: 470 NKEXKITITNDKGRLSKEEIERMVNEAEKYRNEDDK 363
NKE K + DKG K ++E EKY E+DK
Sbjct: 84 NKE-KYDLEEDKGNKEKYDLEEDKGNKEKYDLEEDK 118
Score = 28.3 bits (60), Expect = 5.0
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = -3
Query: 470 NKEXKITITNDKGRLSKEEIERMVNEAEKYRNEDDK 363
NKE K + DKG K ++E EKY E+DK
Sbjct: 96 NKE-KYDLEEDKGNKEKYDLEEDKGNKEKYDLEEDK 130
Score = 28.3 bits (60), Expect = 5.0
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = -3
Query: 470 NKEXKITITNDKGRLSKEEIERMVNEAEKYRNEDDK 363
NKE K + DKG K ++E EKY E+DK
Sbjct: 108 NKE-KYDLEEDKGNKEKYDLEEDKGNKEKYDLEEDK 142
Score = 28.3 bits (60), Expect = 5.0
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = -3
Query: 470 NKEXKITITNDKGRLSKEEIERMVNEAEKYRNEDDK 363
NKE K + DKG K ++E EKY E+DK
Sbjct: 120 NKE-KYDLEEDKGNKEKYDLEEDKGNKEKYDLEEDK 154
Score = 28.3 bits (60), Expect = 5.0
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = -3
Query: 470 NKEXKITITNDKGRLSKEEIERMVNEAEKYRNEDDK 363
NKE K + DKG K ++E EKY E+DK
Sbjct: 132 NKE-KYDLEEDKGNKEKYDLEEDKGNKEKYDLEEDK 166
>SB_44922| Best HMM Match : RNA_pol_Rpb1_1 (HMM E-Value=0)
Length = 1596
Score = 28.3 bits (60), Expect = 5.0
Identities = 15/74 (20%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Frame = -3
Query: 470 NKEXKITITNDKGRLSKEEIERMVNEAE-KYRNEDDKQKETIQAKNALESYCFSMKSTME 294
+K + + N+ L E +E +++ + + NE+++++E + +++ S + E
Sbjct: 329 SKAGNMAVGNENETLDHEIVEETMSDPDPEEENEEEEEEEEEDLVDPMDAIRESCEEKPE 388
Query: 293 DEKLKEKISDSDKR 252
KLK ++S+ ++R
Sbjct: 389 CSKLKLELSNCEER 402
>SB_44787| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 522
Score = 28.3 bits (60), Expect = 5.0
Identities = 15/52 (28%), Positives = 28/52 (53%)
Frame = -3
Query: 422 KEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKIS 267
K+E R+ +EAEK E++K K+ + + + Y ++ + K K+K S
Sbjct: 467 KDEQSRLFDEAEKLEKENNKLKDEVGSLSKEIEYLKNLMLEVYQTKQKQKES 518
>SB_32331| Best HMM Match : DivIVA (HMM E-Value=0.86)
Length = 888
Score = 28.3 bits (60), Expect = 5.0
Identities = 14/62 (22%), Positives = 33/62 (53%)
Frame = -3
Query: 458 KITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLK 279
++ I +D G L ++ N+ +K E+D+ +E + E++ SM+ + D++ +
Sbjct: 618 EVKIYDDDGDLKVSKLTGFFNDDDKEEEEEDRAEECEET----EAHIISMQEEVNDDETE 673
Query: 278 EK 273
E+
Sbjct: 674 EE 675
>SB_7623| Best HMM Match : SURF6 (HMM E-Value=2.6)
Length = 256
Score = 28.3 bits (60), Expect = 5.0
Identities = 19/56 (33%), Positives = 28/56 (50%)
Frame = -3
Query: 422 KEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDK 255
K E+E+ E EK R E +KQ+ + K LES E+ K+ I D++K
Sbjct: 105 KNEVEKERQEEEKRRMEIEKQRMESEKKRILES------KQKRIEESKDTIHDNEK 154
>SB_26915| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3934
Score = 28.3 bits (60), Expect = 5.0
Identities = 14/48 (29%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Frame = -3
Query: 392 AEKYRNEDDKQKETIQAKNALESYCFSMKSTMED-EKLKEKISDSDKR 252
AEKY +E ++K+ ++ LES + +E EK + S+ ++R
Sbjct: 2091 AEKYEHESQEKKKIVEISETLESKNRKQQELLESLEKKLSEFSEKEER 2138
>SB_24447| Best HMM Match : TolA (HMM E-Value=1.3)
Length = 325
Score = 28.3 bits (60), Expect = 5.0
Identities = 12/49 (24%), Positives = 29/49 (59%)
Frame = -3
Query: 467 KEXKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESY 321
K+ +I N + ++ KE+ +M+ ++ K RN+ + + ++N L++Y
Sbjct: 76 KQLEINKLNRELKVLKEDYAKMIVKSYKSRNDQSRVMFVLSSQNFLQAY 124
>SB_23774| Best HMM Match : Kinesin (HMM E-Value=0)
Length = 805
Score = 28.3 bits (60), Expect = 5.0
Identities = 17/55 (30%), Positives = 31/55 (56%)
Frame = -3
Query: 419 EEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDK 255
EE+E + + E+ R+ + Q ET++ +N E K T E++ LKE I+ ++
Sbjct: 54 EELEDRIAKLEEERDNLEVQLETVRKENDTE----MEKQTNENDTLKETITGHEE 104
>SB_2434| Best HMM Match : Vicilin_N (HMM E-Value=0.01)
Length = 317
Score = 28.3 bits (60), Expect = 5.0
Identities = 19/56 (33%), Positives = 28/56 (50%)
Frame = -3
Query: 422 KEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDK 255
K E+E+ E EK R E +KQ+ + K LES E+ K+ I D++K
Sbjct: 223 KNEVEKERQEEEKRRMEIEKQRMESEKKRILES------KQKRIEESKDTIHDNEK 272
>SB_54892| Best HMM Match : DHH (HMM E-Value=0.057)
Length = 384
Score = 27.9 bits (59), Expect = 6.6
Identities = 18/63 (28%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Frame = -3
Query: 440 DKGRLSKEEIERMVNEAEKYRNED-DKQKETIQAKNALESYCFSMKSTMEDEKLKEKISD 264
DK + + EE+ VNEA K E KQ++T Q+ + + C ++ E+ S+
Sbjct: 156 DKVKFNLEELYHSVNEATKRNTEAIQKQRQTRQSPASPGTICRLYNKKLDFEQFDYGFSE 215
Query: 263 SDK 255
+ K
Sbjct: 216 TIK 218
>SB_40334| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1061
Score = 27.9 bits (59), Expect = 6.6
Identities = 16/62 (25%), Positives = 30/62 (48%)
Frame = -3
Query: 443 NDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISD 264
+D ++ EE E ++AE E D++ +A ++ S +D++L EK+ D
Sbjct: 975 SDASHVTSEE-EMQASDAESEEKEKDEESSDAEAPSSSRKRVISSD---DDDELDEKLDD 1030
Query: 263 SD 258
D
Sbjct: 1031 DD 1032
>SB_50337| Best HMM Match : Extensin_1 (HMM E-Value=0.19)
Length = 86
Score = 27.9 bits (59), Expect = 6.6
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = -3
Query: 71 PEPEVPPPGLEALAPPSRRSIKP 3
P+P+ PPPG PPS + P
Sbjct: 28 PKPDTPPPGTNIPTPPSPNTPPP 50
>SB_20161| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 475
Score = 27.9 bits (59), Expect = 6.6
Identities = 17/42 (40%), Positives = 26/42 (61%), Gaps = 7/42 (16%)
Frame = -2
Query: 255 ETILDKCNDTIKWLDSN------QLADK-EEYEHKQKELEGI 151
E +++C TIK LDSN Q+AD+ EE + ++ELE +
Sbjct: 192 EKEVNRCEATIKTLDSNLKDLRQQVADRDEELNNNRQELESV 233
>SB_11774| Best HMM Match : M (HMM E-Value=8.5e-09)
Length = 1998
Score = 27.9 bits (59), Expect = 6.6
Identities = 16/53 (30%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = -3
Query: 419 EEIERMVNE-AEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISD 264
E+ E+++ + AEK R +K+KE + E F + + +DE L +K+ D
Sbjct: 1446 EKREKVLQDGAEKDRKGFEKEKEEFEEAFRKEKKIFQDELSKKDEDLAQKLQD 1498
>SB_43252| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 699
Score = 27.5 bits (58), Expect = 8.7
Identities = 17/45 (37%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = -2
Query: 258 QETILDKCNDTIKW-LDSNQLADKEEYEHKQKELEGIYNPIITKM 127
+E L + T+K+ LD +LA KE++ +KE EG + TKM
Sbjct: 116 KEQELSELRKTVKYALDQEKLA-KEQFGDLKKEFEGYKKKMDTKM 159
>SB_28185| Best HMM Match : FIVAR (HMM E-Value=2.2)
Length = 106
Score = 27.5 bits (58), Expect = 8.7
Identities = 20/82 (24%), Positives = 46/82 (56%), Gaps = 4/82 (4%)
Frame = -3
Query: 503 ILNVSAIXKSTNKEXKIT-ITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNA-L 330
+++VS + + N + ++ + K +L+ E++E + +NE K+KET+ A + L
Sbjct: 1 MVSVSYLQINNNLKGEVRELYESKSKLA-EQLENSRQLIKSIKNEHKKEKETLTALTSDL 59
Query: 329 ESYCFSMKSTMEDEK--LKEKI 270
+ + K T++ E+ L++K+
Sbjct: 60 QQKLGAAKDTLDRERRTLRDKL 81
>SB_12264| Best HMM Match : Filament (HMM E-Value=0.0075)
Length = 762
Score = 27.5 bits (58), Expect = 8.7
Identities = 16/72 (22%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Frame = -3
Query: 467 KEXKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNA-LESYCFSMKSTMED 291
++ I + N K + ++E+E+ E ++ + ++T+Q K A L ++K E+
Sbjct: 1 RDKTIGVLNSKVKNMQQELEQYKKELQESLSISTVMEQTLQVKEASLIQAEETLKELQEN 60
Query: 290 EKLKEKISDSDK 255
++ EK+ +K
Sbjct: 61 QQYIEKVEQLEK 72
>SB_51415| Best HMM Match : zf-CCCH (HMM E-Value=1.1)
Length = 332
Score = 27.5 bits (58), Expect = 8.7
Identities = 16/61 (26%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
Frame = -3
Query: 497 NVSAIXKSTNKEXKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQ--KETIQAKNALES 324
NVS + K K+ + GR K ++ + EK++ + K+ +E Q K A++
Sbjct: 100 NVSVLVKPDCKQDAVKEQKPSGRKLKRKLYKQRKRQEKFKKIEKKKAIREQKQQKAAIQR 159
Query: 323 Y 321
Y
Sbjct: 160 Y 160
>SB_44544| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1480
Score = 27.5 bits (58), Expect = 8.7
Identities = 16/42 (38%), Positives = 19/42 (45%)
Frame = +3
Query: 57 HLRLRVLRPGSPAYLRGLLRHPGTSS*LSDCKCLPILSACAH 182
HL +RVL P P L LS C CLP+ +C H
Sbjct: 1140 HLSVRVLSPVCPRVFTCLYACVN----LSVCVCLPVCFSCVH 1177
Score = 27.5 bits (58), Expect = 8.7
Identities = 16/42 (38%), Positives = 19/42 (45%)
Frame = +3
Query: 57 HLRLRVLRPGSPAYLRGLLRHPGTSS*LSDCKCLPILSACAH 182
HL +RVL P P L LS C CLP+ +C H
Sbjct: 1177 HLSVRVLSPVCPRVFTCLYACVN----LSVCVCLPVCFSCVH 1214
>SB_23299| Best HMM Match : zf-C3HC4 (HMM E-Value=5.9e-06)
Length = 418
Score = 27.5 bits (58), Expect = 8.7
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = -3
Query: 419 EEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEK 285
E E + N+ ++ +DDK++ET K + + S EDEK
Sbjct: 40 EAAEEVENKMDEMSVKDDKREETQSDKKSAKESTKSSSKPAEDEK 84
>SB_20481| Best HMM Match : Pox_A_type_inc (HMM E-Value=5.60519e-45)
Length = 4160
Score = 27.5 bits (58), Expect = 8.7
Identities = 20/64 (31%), Positives = 37/64 (57%)
Frame = -3
Query: 452 TITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEK 273
T+ ND ++K+E+ER+ +K D+K+KE ++ K L+ TME ++L+
Sbjct: 3498 TVDND---ITKDELERL----KKIVENDEKEKENLKRK--LQG--SDSDGTMERKRLQRD 3546
Query: 272 ISDS 261
+SD+
Sbjct: 3547 MSDA 3550
>SB_18255| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1457
Score = 27.5 bits (58), Expect = 8.7
Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = -3
Query: 422 KEEIERMVNEAEKYRNEDDKQKETIQ-AKNALESYCFSMKSTMEDEKLKEKISDSDK 255
KE E +NE +KY N+ K +Q KNAL+ + S D L K + ++
Sbjct: 811 KERSEAWLNEKQKYTNDIKHIKTEVQLCKNALDGTKQKVLSLENDLLLTSKQLEKER 867
>SB_8472| Best HMM Match : TatC (HMM E-Value=1.4)
Length = 476
Score = 27.5 bits (58), Expect = 8.7
Identities = 12/38 (31%), Positives = 18/38 (47%)
Frame = -3
Query: 167 KNWKAFTIR*LRRCTRVPEESPEVCRASRAEHPEPEVP 54
KN+ ++ L R P+E ++ SR PEP P
Sbjct: 8 KNFDEVVVQLLMRMYEPPDEGSDIATFSRESDPEPNPP 45
>SB_3240| Best HMM Match : Sec8_exocyst (HMM E-Value=0.48)
Length = 643
Score = 27.5 bits (58), Expect = 8.7
Identities = 18/52 (34%), Positives = 24/52 (46%)
Frame = -3
Query: 431 RLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKE 276
R S EE+ R E E E K +ETIQ N E MK + D+ ++
Sbjct: 380 RASVEELVRTRKELEMKEKELQKAQETIQQMNEREQ---QMKERLADQAQRQ 428
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,199,674
Number of Sequences: 59808
Number of extensions: 332769
Number of successful extensions: 1739
Number of sequences better than 10.0: 54
Number of HSP's better than 10.0 without gapping: 1500
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1718
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1439498375
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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