Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0345.Seq
(598 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z80223-1|CAB02319.1| 640|Caenorhabditis elegans Hypothetical pr... 149 2e-36
M18540-1|AAA28078.1| 640|Caenorhabditis elegans protein ( C.ele... 141 3e-34
U56965-1|AAB52671.1| 661|Caenorhabditis elegans Heat shock prot... 113 7e-26
AF000264-1|AAC71123.1| 657|Caenorhabditis elegans Heat shock pr... 111 3e-25
M26604-1|AAA28074.1| 661|Caenorhabditis elegans protein ( C. el... 111 4e-25
M28528-1|AAA28076.1| 288|Caenorhabditis elegans protein ( C.ele... 110 8e-25
Z83108-5|CAB05508.1| 645|Caenorhabditis elegans Hypothetical pr... 108 3e-24
Z83108-4|CAB05507.1| 645|Caenorhabditis elegans Hypothetical pr... 108 3e-24
Z81467-1|CAB03871.1| 643|Caenorhabditis elegans Hypothetical pr... 103 7e-23
U88315-3|AAB42371.1| 657|Caenorhabditis elegans Heat shock prot... 77 1e-14
U28940-6|AAA68352.1| 925|Caenorhabditis elegans Hypothetical pr... 39 0.002
Z70204-3|CAA94113.1| 385|Caenorhabditis elegans Hypothetical pr... 35 0.051
AL132904-10|CAC35843.2| 1481|Caenorhabditis elegans Hypothetical... 33 0.20
Z32683-4|CAA83629.1| 443|Caenorhabditis elegans Hypothetical pr... 32 0.27
U88172-8|AAB42258.1| 312|Caenorhabditis elegans Hypothetical pr... 31 0.62
U64608-2|AAB04591.1| 537|Caenorhabditis elegans Hypothetical pr... 31 0.62
U64862-5|AAQ91890.1| 2350|Caenorhabditis elegans Lin-5 (five) in... 31 0.82
U64862-4|AAZ32792.1| 2117|Caenorhabditis elegans Lin-5 (five) in... 31 0.82
U64862-3|AAM69078.1| 2396|Caenorhabditis elegans Lin-5 (five) in... 31 0.82
AF078790-14|AAC26930.1| 335|Caenorhabditis elegans Hypothetical... 31 0.82
L09634-1|AAA27967.1| 776|Caenorhabditis elegans Hypothetical pr... 30 1.1
AY145133-1|AAN52916.1| 435|Caenorhabditis elegans TCL-2 protein. 30 1.1
AC024761-7|AAF59468.3| 435|Caenorhabditis elegans T cell lineag... 30 1.1
Z35663-11|CAA84732.2| 791|Caenorhabditis elegans Hypothetical p... 30 1.4
U88172-4|AAB42259.1| 224|Caenorhabditis elegans Hypothetical pr... 30 1.4
U13644-9|AAB52680.3| 492|Caenorhabditis elegans Cell death abno... 30 1.4
AF061513-1|AAC24362.1| 492|Caenorhabditis elegans candidate ada... 30 1.4
AC024791-2|AAK95891.1| 604|Caenorhabditis elegans Temporarily a... 30 1.4
U70852-1|AAK29815.1| 2361|Caenorhabditis elegans Hypothetical pr... 29 1.9
U61954-8|AAM98018.1| 1005|Caenorhabditis elegans Hypothetical pr... 29 1.9
U61954-7|AAK29803.1| 1140|Caenorhabditis elegans Hypothetical pr... 29 1.9
AF067216-1|AAC17524.1| 301|Caenorhabditis elegans Hypothetical ... 29 1.9
AF016669-2|AAB66099.2| 455|Caenorhabditis elegans Hypothetical ... 29 1.9
AC024875-7|AAK29987.2| 97|Caenorhabditis elegans Knl (kinetoch... 29 1.9
Z75553-4|CAA99946.1| 389|Caenorhabditis elegans Hypothetical pr... 29 2.5
Z48178-7|CAE48493.1| 212|Caenorhabditis elegans Hypothetical pr... 29 2.5
Z48178-6|CAA88203.1| 212|Caenorhabditis elegans Hypothetical pr... 29 2.5
U13070-7|AAC46638.1| 414|Caenorhabditis elegans Rabaptin (rab e... 29 2.5
X56213-1|CAA39670.1| 1651|Caenorhabditis elegans vitellogenin pr... 29 3.3
U80032-4|AAL16309.2| 1553|Caenorhabditis elegans Hypothetical pr... 29 3.3
U41013-2|AAA82300.1| 557|Caenorhabditis elegans Hypothetical pr... 29 3.3
AF047659-3|AAC04423.2| 1650|Caenorhabditis elegans Vitellogenin ... 29 3.3
AF047659-2|AAQ91901.1| 1651|Caenorhabditis elegans Vitellogenin ... 29 3.3
AF039041-8|AAB94189.2| 448|Caenorhabditis elegans Hypothetical ... 29 3.3
AF022982-4|AAB69938.1| 296|Caenorhabditis elegans Dnaj domain (... 29 3.3
AL034393-27|CAH19090.1| 710|Caenorhabditis elegans Hypothetical... 28 4.4
AL008866-2|CAA15508.2| 710|Caenorhabditis elegans Hypothetical ... 28 4.4
AC024838-6|AAF60823.1| 214|Caenorhabditis elegans Hypothetical ... 28 4.4
AC006791-7|AAF60740.2| 448|Caenorhabditis elegans Hypothetical ... 28 4.4
Z99281-44|CAJ76963.1| 96|Caenorhabditis elegans Hypothetical p... 28 5.8
U80447-4|AAB37808.1| 560|Caenorhabditis elegans Temporarily ass... 28 5.8
U61954-5|AAK29812.1| 575|Caenorhabditis elegans Hypothetical pr... 28 5.8
DQ645890-1|ABG34266.1| 560|Caenorhabditis elegans CIR-1 protein. 28 5.8
AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 prote... 28 5.8
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 28 5.8
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 28 5.8
AF045641-4|AAO91715.1| 332|Caenorhabditis elegans Hypothetical ... 28 5.8
AF045641-3|AAO91716.1| 368|Caenorhabditis elegans Hypothetical ... 28 5.8
AF045641-2|AAC02578.2| 1370|Caenorhabditis elegans Hypothetical ... 28 5.8
AC006733-1|AAF60487.1| 610|Caenorhabditis elegans Hypothetical ... 28 5.8
Z36753-10|CAA85341.1| 708|Caenorhabditis elegans Hypothetical p... 27 7.7
AL032632-9|CAA21588.2| 1464|Caenorhabditis elegans Hypothetical ... 27 7.7
>Z80223-1|CAB02319.1| 640|Caenorhabditis elegans Hypothetical
protein F26D10.3 protein.
Length = 640
Score = 149 bits (360), Expect = 2e-36
Identities = 75/113 (66%), Positives = 87/113 (76%)
Frame = -3
Query: 590 GKFXX*PGIPPAPRGVPQI*GHLXHRCXGILNVSAIXKSTNKEXKITITNDKGRLSKEEI 411
GKF GIPPAPRGVPQI GILNVSA KST K+ KITITNDKGRLSK++I
Sbjct: 458 GKFEL-SGIPPAPRGVPQIEVTFDIDANGILNVSATDKSTGKQNKITITNDKGRLSKDDI 516
Query: 410 ERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKR 252
ERMVNEAEKY+ +D+ QK+ I AKN LESY F++K T+EDEKLK+KIS DK+
Sbjct: 517 ERMVNEAEKYKADDEAQKDRIGAKNGLESYAFNLKQTIEDEKLKDKISPEDKK 569
Score = 73.3 bits (172), Expect = 1e-13
Identities = 29/46 (63%), Positives = 41/46 (89%)
Frame = -2
Query: 258 QETILDKCNDTIKWLDSNQLADKEEYEHKQKELEGIYNPIITKMYQ 121
++ I DKC++ +KWLDSNQ A+KEE+EH+QK+LEG+ NPII+K+YQ
Sbjct: 568 KKKIEDKCDEILKWLDSNQTAEKEEFEHQQKDLEGLANPIISKLYQ 613
>M18540-1|AAA28078.1| 640|Caenorhabditis elegans protein (
C.elegans heat shockprotein 70A gene, complete cds. ).
Length = 640
Score = 141 bits (342), Expect = 3e-34
Identities = 72/113 (63%), Positives = 84/113 (74%)
Frame = -3
Query: 590 GKFXX*PGIPPAPRGVPQI*GHLXHRCXGILNVSAIXKSTNKEXKITITNDKGRLSKEEI 411
GKF GIPPAPRGVPQI GILNVSA KST K +ITITNDK R SK++I
Sbjct: 458 GKFEL-SGIPPAPRGVPQIEVTFDIDANGILNVSATDKSTGKAKQITITNDKDRFSKDDI 516
Query: 410 ERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKR 252
ERMVNEAEKY+ +D+ QK+ I AKN LESY F++K T+EDEKLK+KIS DK+
Sbjct: 517 ERMVNEAEKYKADDEAQKDRIGAKNGLESYAFNLKQTIEDEKLKDKISPEDKK 569
Score = 63.7 bits (148), Expect = 1e-10
Identities = 25/46 (54%), Positives = 38/46 (82%)
Frame = -2
Query: 258 QETILDKCNDTIKWLDSNQLADKEEYEHKQKELEGIYNPIITKMYQ 121
++ I DKC++ +KWLDSNQ A+KEE+E +QK+LEG+ P ++K+YQ
Sbjct: 568 KKKIEDKCDEILKWLDSNQTAEKEEFESQQKDLEGLAKPDLSKLYQ 613
>U56965-1|AAB52671.1| 661|Caenorhabditis elegans Heat shock protein
protein 3 protein.
Length = 661
Score = 113 bits (273), Expect = 7e-26
Identities = 58/114 (50%), Positives = 79/114 (69%), Gaps = 1/114 (0%)
Frame = -3
Query: 590 GKFXX*PGIPPAPRGVPQI*GHLXHRCXGILNVSAIXKSTNKEXKITITNDKGRLSKEEI 411
GKF G+PPAPRGVPQI GIL+V+A K T + KITITND+ RLS E+I
Sbjct: 485 GKFDL-TGLPPAPRGVPQIEVTFEIDVNGILHVTAEDKGTGNKNKITITNDQNRLSPEDI 543
Query: 410 ERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMED-EKLKEKISDSDKR 252
ERM+N+AEK+ +D K K+ +A+N LESY +++K+ +ED EKL K+ + DK+
Sbjct: 544 ERMINDAEKFAEDDKKVKDKAEARNELESYAYNLKNQIEDKEKLGGKLDEDDKK 597
Score = 40.7 bits (91), Expect = 8e-04
Identities = 17/46 (36%), Positives = 29/46 (63%)
Frame = -2
Query: 258 QETILDKCNDTIKWLDSNQLADKEEYEHKQKELEGIYNPIITKMYQ 121
++TI + + I WL SN A EE + ++K+LE PI++K+Y+
Sbjct: 596 KKTIEEAVEEAISWLGSNAEASAEELKEQKKDLESKVQPIVSKLYK 641
>AF000264-1|AAC71123.1| 657|Caenorhabditis elegans Heat shock
protein protein 4 protein.
Length = 657
Score = 111 bits (268), Expect = 3e-25
Identities = 55/106 (51%), Positives = 74/106 (69%), Gaps = 1/106 (0%)
Frame = -3
Query: 569 GIPPAPRGVPQI*GHLXHRCXGILNVSAIXKSTNKEXKITITNDKGRLSKEEIERMVNEA 390
GIPPAPRGVPQI GIL+VSA K T + K+TITND RLS E+IERM+N+A
Sbjct: 488 GIPPAPRGVPQIEVTFEIDVNGILHVSAEDKGTGNKNKLTITNDHNRLSPEDIERMINDA 547
Query: 389 EKYRNEDDKQKETIQAKNALESYCFSMKSTMED-EKLKEKISDSDK 255
+K+ +D QKE ++++N LE+Y + MK+ + D EKL K++D DK
Sbjct: 548 DKFAADDQAQKEKVESRNELEAYAYQMKTQIADKEKLGGKLTDEDK 593
Score = 41.9 bits (94), Expect = 3e-04
Identities = 17/34 (50%), Positives = 25/34 (73%)
Frame = -2
Query: 225 IKWLDSNQLADKEEYEHKQKELEGIYNPIITKMY 124
I+WL SNQ A EE + ++KELE + PI++K+Y
Sbjct: 604 IEWLGSNQDASTEENKEQKKELESVVQPIVSKLY 637
>M26604-1|AAA28074.1| 661|Caenorhabditis elegans protein ( C.
elegans BiP (hsp3)gene, complete cds. ).
Length = 661
Score = 111 bits (267), Expect = 4e-25
Identities = 57/114 (50%), Positives = 78/114 (68%), Gaps = 1/114 (0%)
Frame = -3
Query: 590 GKFXX*PGIPPAPRGVPQI*GHLXHRCXGILNVSAIXKSTNKEXKITITNDKGRLSKEEI 411
GKF G+PPAPRGVPQI GIL+V+A K T + KITITND+ RLS E+I
Sbjct: 485 GKFDL-TGLPPAPRGVPQIEVTFEIDVNGILHVTAEDKGTGNKNKITITNDQNRLSPEDI 543
Query: 410 ERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMED-EKLKEKISDSDKR 252
E M+N+AEK+ +D K K+ +A+N LESY +++K+ +ED EKL K+ + DK+
Sbjct: 544 EAMINDAEKFAEDDKKVKDKAEARNELESYAYNLKNQIEDKEKLGGKLDEDDKK 597
Score = 40.7 bits (91), Expect = 8e-04
Identities = 17/46 (36%), Positives = 29/46 (63%)
Frame = -2
Query: 258 QETILDKCNDTIKWLDSNQLADKEEYEHKQKELEGIYNPIITKMYQ 121
++TI + + I WL SN A EE + ++K+LE PI++K+Y+
Sbjct: 596 KKTIEEAVEEAISWLGSNAEASAEELKEQKKDLESKVQPIVSKLYK 641
>M28528-1|AAA28076.1| 288|Caenorhabditis elegans protein (
C.elegans heat shockprotein 4 gene, 3' end. ).
Length = 288
Score = 110 bits (264), Expect = 8e-25
Identities = 54/106 (50%), Positives = 74/106 (69%), Gaps = 1/106 (0%)
Frame = -3
Query: 569 GIPPAPRGVPQI*GHLXHRCXGILNVSAIXKSTNKEXKITITNDKGRLSKEEIERMVNEA 390
GIPPAPRGVPQI GIL+VSA K T + K+TITND RLS E+IERM+N+A
Sbjct: 119 GIPPAPRGVPQIEVTFEIDVNGILHVSAEDKGTGNKNKLTITNDHNRLSPEDIERMINDA 178
Query: 389 EKYRNEDDKQKETIQAKNALESYCFSMKSTMED-EKLKEKISDSDK 255
+K+ +D QKE ++++N LE+Y + +K+ + D EKL K++D DK
Sbjct: 179 DKFAADDQAQKEKVESRNELEAYAYQIKTQIADKEKLGGKLTDEDK 224
Score = 41.9 bits (94), Expect = 3e-04
Identities = 17/34 (50%), Positives = 25/34 (73%)
Frame = -2
Query: 225 IKWLDSNQLADKEEYEHKQKELEGIYNPIITKMY 124
I+WL SNQ A EE + ++KELE + PI++K+Y
Sbjct: 235 IEWLGSNQDASTEENKEQKKELESVVQPIVSKLY 268
>Z83108-5|CAB05508.1| 645|Caenorhabditis elegans Hypothetical
protein F44E5.5 protein.
Length = 645
Score = 108 bits (259), Expect = 3e-24
Identities = 51/105 (48%), Positives = 72/105 (68%)
Frame = -3
Query: 569 GIPPAPRGVPQI*GHLXHRCXGILNVSAIXKSTNKEXKITITNDKGRLSKEEIERMVNEA 390
GIPPAPRGVPQI GILNVSA KST K +ITI N+KGRL++ +I+RMV+EA
Sbjct: 464 GIPPAPRGVPQIEVTFDIDANGILNVSAEDKSTGKSNRITIQNEKGRLTQSDIDRMVHEA 523
Query: 389 EKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDK 255
+++ ED +Q+E +QA+N LE+Y F +K +++ K D+ +
Sbjct: 524 KQFEKEDGEQRERVQARNQLEAYAFQIKQALDEYSSKLSTEDASR 568
Score = 50.4 bits (115), Expect = 1e-06
Identities = 20/38 (52%), Positives = 30/38 (78%)
Frame = -2
Query: 234 NDTIKWLDSNQLADKEEYEHKQKELEGIYNPIITKMYQ 121
++T++WLDSN LA+K+E E K KEL+ + I+TKM+Q
Sbjct: 574 DETLRWLDSNSLAEKDEIEAKDKELKSVCQSILTKMHQ 611
>Z83108-4|CAB05507.1| 645|Caenorhabditis elegans Hypothetical
protein F44E5.4 protein.
Length = 645
Score = 108 bits (259), Expect = 3e-24
Identities = 51/105 (48%), Positives = 72/105 (68%)
Frame = -3
Query: 569 GIPPAPRGVPQI*GHLXHRCXGILNVSAIXKSTNKEXKITITNDKGRLSKEEIERMVNEA 390
GIPPAPRGVPQI GILNVSA KST K +ITI N+KGRL++ +I+RMV+EA
Sbjct: 464 GIPPAPRGVPQIEVTFDIDANGILNVSAEDKSTGKSNRITIQNEKGRLTQSDIDRMVHEA 523
Query: 389 EKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDK 255
+++ ED +Q+E +QA+N LE+Y F +K +++ K D+ +
Sbjct: 524 KQFEKEDGEQRERVQARNQLEAYAFQIKQALDEYSSKLSTEDASR 568
Score = 50.4 bits (115), Expect = 1e-06
Identities = 20/38 (52%), Positives = 30/38 (78%)
Frame = -2
Query: 234 NDTIKWLDSNQLADKEEYEHKQKELEGIYNPIITKMYQ 121
++T++WLDSN LA+K+E E K KEL+ + I+TKM+Q
Sbjct: 574 DETLRWLDSNSLAEKDEIEAKDKELKSVCQSILTKMHQ 611
>Z81467-1|CAB03871.1| 643|Caenorhabditis elegans Hypothetical
protein C12C8.1 protein.
Length = 643
Score = 103 bits (248), Expect = 7e-23
Identities = 48/93 (51%), Positives = 66/93 (70%)
Frame = -3
Query: 569 GIPPAPRGVPQI*GHLXHRCXGILNVSAIXKSTNKEXKITITNDKGRLSKEEIERMVNEA 390
GIPPAPRGVPQ+ GILNVSA KST + +ITI N+KGRLS+ +I+RMVNEA
Sbjct: 464 GIPPAPRGVPQVDVTFDIDANGILNVSAADKSTGRSNRITIRNEKGRLSQADIDRMVNEA 523
Query: 389 EKYRNEDDKQKETIQAKNALESYCFSMKSTMED 291
+++ ED Q++ I ++N LE+Y F +K +E+
Sbjct: 524 KQFEREDAAQRDRISSRNQLEAYAFQVKQALEE 556
Score = 50.4 bits (115), Expect = 1e-06
Identities = 21/41 (51%), Positives = 29/41 (70%)
Frame = -2
Query: 243 DKCNDTIKWLDSNQLADKEEYEHKQKELEGIYNPIITKMYQ 121
D DT++W++ N LADK+E E K KEL+ I I+TKM+Q
Sbjct: 571 DAVEDTLRWMERNTLADKDEIEAKDKELKSICQDILTKMHQ 611
>U88315-3|AAB42371.1| 657|Caenorhabditis elegans Heat shock protein
protein 6 protein.
Length = 657
Score = 76.6 bits (180), Expect = 1e-14
Identities = 48/115 (41%), Positives = 64/115 (55%), Gaps = 10/115 (8%)
Frame = -3
Query: 569 GIPPAPRGVPQI*GHLXHRCXGILNVSAIXKSTNKEXKITITNDKGRLSKEEIERMVNEA 390
GIPPAPRGVPQ+ GI+NVSA + T KE +I I + G LSK++IE M+ EA
Sbjct: 486 GIPPAPRGVPQVEVTFDIDANGIVNVSARDRGTGKEQQIVIQSSGG-LSKDQIENMIKEA 544
Query: 389 EKYRNEDDKQKETIQAKNALESYCFSMKSTM----------EDEKLKEKISDSDK 255
EK ED K+KE ++ N E ++ M E E L+ KI+D+ K
Sbjct: 545 EKNAAEDAKRKELVEVINQAEGIIHDTEAKMTEFADQLPKDECEALRTKIADTKK 599
>U28940-6|AAA68352.1| 925|Caenorhabditis elegans Hypothetical protein
T24H7.2 protein.
Length = 925
Score = 39.1 bits (87), Expect = 0.002
Identities = 21/54 (38%), Positives = 30/54 (55%)
Frame = -3
Query: 485 IXKSTNKEXKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALES 324
+ + K KIT +D + K +I+ +V EAEK + E DK+KE K A ES
Sbjct: 860 VDRFMKKMKKITTLDDLAKDGKIDIDTIVEEAEKKKAEQDKKKEKKSTKKANES 913
>Z70204-3|CAA94113.1| 385|Caenorhabditis elegans Hypothetical
protein C11G6.3 protein.
Length = 385
Score = 34.7 bits (76), Expect = 0.051
Identities = 22/62 (35%), Positives = 32/62 (51%)
Frame = -3
Query: 440 DKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDS 261
D R+++EE ER E EK R E KQKE ++ K E + E EK +EK +
Sbjct: 178 DAKRVAEEEEERR-KEKEKRREEKKKQKELLKEKERSERKEKERELEREKEKSREKEREK 236
Query: 260 DK 255
++
Sbjct: 237 ER 238
>AL132904-10|CAC35843.2| 1481|Caenorhabditis elegans Hypothetical
protein Y111B2A.14 protein.
Length = 1481
Score = 32.7 bits (71), Expect = 0.20
Identities = 19/56 (33%), Positives = 30/56 (53%)
Frame = -3
Query: 440 DKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEK 273
++ + KEE ER+ EK + E +KQ E K+ +E+ F + E EK +EK
Sbjct: 957 EQRKAKKEEAERLKKLEEKLKKEKEKQAE----KDRIEAKKFEERMKKEQEKQEEK 1008
>Z32683-4|CAA83629.1| 443|Caenorhabditis elegans Hypothetical
protein R07E5.6 protein.
Length = 443
Score = 32.3 bits (70), Expect = 0.27
Identities = 23/77 (29%), Positives = 39/77 (50%), Gaps = 2/77 (2%)
Frame = -3
Query: 479 KSTNKEXKITITNDKGRLSKEE-IERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKS 303
K K+ +K R+ KEE I++ V EAEK + E+ +++ KN E + +
Sbjct: 252 KIKKKDEDEKAKKEKERIDKEEKIKKEVEEAEKKKKEEKEKRRKEVKKNREEQLSINPEM 311
Query: 302 TMEDEK-LKEKISDSDK 255
+ D+K + E+ S DK
Sbjct: 312 SRNDKKDVVEEKSCLDK 328
>U88172-8|AAB42258.1| 312|Caenorhabditis elegans Hypothetical
protein ZK354.3 protein.
Length = 312
Score = 31.1 bits (67), Expect = 0.62
Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Frame = -3
Query: 470 NKEXKITITNDKGRLSK-EEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTME 294
+K+ K T DK + K +E + + + R EDDK++E + E +K E
Sbjct: 98 DKKSKKTEEKDKLSVKKTQETKSERKDKKDERKEDDKKEENKEKSKDEEKKKDEVKDKKE 157
Query: 293 DEKLKEK 273
DEK+ +K
Sbjct: 158 DEKMDDK 164
>U64608-2|AAB04591.1| 537|Caenorhabditis elegans Hypothetical
protein T22B7.4 protein.
Length = 537
Score = 31.1 bits (67), Expect = 0.62
Identities = 19/60 (31%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Frame = -3
Query: 428 LSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFS--MKSTME-DEKLKEKISDSD 258
L +E+ + +K+RN+DDK+ + ++ N LE S M+ST E ++ + + S SD
Sbjct: 450 LEEEQDDSEKEVCKKHRNKDDKRVDDVEDSNDLEENASSAPMRSTSECGDERERRNSSSD 509
>U64862-5|AAQ91890.1| 2350|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform d protein.
Length = 2350
Score = 30.7 bits (66), Expect = 0.82
Identities = 21/85 (24%), Positives = 41/85 (48%), Gaps = 1/85 (1%)
Frame = -3
Query: 503 ILNVSAIXKSTNKEXKITITNDKGRLSKEEIERMVNEAE-KYRNEDDKQKETIQAKNALE 327
+LN + E + T+ K + + E +N+ E +YRN +D ++ + + ALE
Sbjct: 1669 LLNKIEKLEMERNELRDTLARMKKKTT--ETHTTINQKETRYRNIEDNLQDAEEERRALE 1726
Query: 326 SYCFSMKSTMEDEKLKEKISDSDKR 252
S S K+ + ++ K D ++R
Sbjct: 1727 SRLQSAKTLLRSQEEALKQRDEERR 1751
>U64862-4|AAZ32792.1| 2117|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform b protein.
Length = 2117
Score = 30.7 bits (66), Expect = 0.82
Identities = 21/85 (24%), Positives = 41/85 (48%), Gaps = 1/85 (1%)
Frame = -3
Query: 503 ILNVSAIXKSTNKEXKITITNDKGRLSKEEIERMVNEAE-KYRNEDDKQKETIQAKNALE 327
+LN + E + T+ K + + E +N+ E +YRN +D ++ + + ALE
Sbjct: 1742 LLNKIEKLEMERNELRDTLARMKKKTT--ETHTTINQKETRYRNIEDNLQDAEEERRALE 1799
Query: 326 SYCFSMKSTMEDEKLKEKISDSDKR 252
S S K+ + ++ K D ++R
Sbjct: 1800 SRLQSAKTLLRSQEEALKQRDEERR 1824
>U64862-3|AAM69078.1| 2396|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform a protein.
Length = 2396
Score = 30.7 bits (66), Expect = 0.82
Identities = 21/85 (24%), Positives = 41/85 (48%), Gaps = 1/85 (1%)
Frame = -3
Query: 503 ILNVSAIXKSTNKEXKITITNDKGRLSKEEIERMVNEAE-KYRNEDDKQKETIQAKNALE 327
+LN + E + T+ K + + E +N+ E +YRN +D ++ + + ALE
Sbjct: 1742 LLNKIEKLEMERNELRDTLARMKKKTT--ETHTTINQKETRYRNIEDNLQDAEEERRALE 1799
Query: 326 SYCFSMKSTMEDEKLKEKISDSDKR 252
S S K+ + ++ K D ++R
Sbjct: 1800 SRLQSAKTLLRSQEEALKQRDEERR 1824
>AF078790-14|AAC26930.1| 335|Caenorhabditis elegans Hypothetical
protein F36H12.3 protein.
Length = 335
Score = 30.7 bits (66), Expect = 0.82
Identities = 19/63 (30%), Positives = 28/63 (44%)
Frame = -3
Query: 440 DKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDS 261
+K KEE E E ++ + EDDK+ E K + + EDEK K+
Sbjct: 88 EKKEEKKEEKEDKKEEKKEEKKEDDKKDEKKDEKKDEKEEDKKSEDKKEDEKEKDDDKKE 147
Query: 260 DKR 252
DK+
Sbjct: 148 DKK 150
Score = 29.5 bits (63), Expect = 1.9
Identities = 16/76 (21%), Positives = 37/76 (48%)
Frame = -3
Query: 479 KSTNKEXKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKST 300
K KE K + +++ E+ ++ + + ED+K+K+ + ++ + K
Sbjct: 101 KEEKKEEKKEDDKKDEKKDEKKDEKEEDKKSEDKKEDEKEKDDDKKEDKKDDKKSDNKDD 160
Query: 299 MEDEKLKEKISDSDKR 252
+DEK +EK D +++
Sbjct: 161 KDDEKKEEKKDDKEEK 176
>L09634-1|AAA27967.1| 776|Caenorhabditis elegans Hypothetical
protein C30C11.4 protein.
Length = 776
Score = 30.3 bits (65), Expect = 1.1
Identities = 11/43 (25%), Positives = 24/43 (55%)
Frame = -3
Query: 416 EIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDE 288
++++ N + + D ++K AKN+LE Y + M+ + D+
Sbjct: 552 DVQKFHNLELQMQESDAREKAKADAKNSLEEYVYEMRDKVSDQ 594
>AY145133-1|AAN52916.1| 435|Caenorhabditis elegans TCL-2 protein.
Length = 435
Score = 30.3 bits (65), Expect = 1.1
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = -3
Query: 77 EHPEPEVPPPGLEALAPPSRRSIK 6
E P E PPG +PPSR+ IK
Sbjct: 102 EGPNQEALPPGFNLFSPPSRKKIK 125
>AC024761-7|AAF59468.3| 435|Caenorhabditis elegans T cell lineage
defect protein 2 protein.
Length = 435
Score = 30.3 bits (65), Expect = 1.1
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = -3
Query: 77 EHPEPEVPPPGLEALAPPSRRSIK 6
E P E PPG +PPSR+ IK
Sbjct: 102 EGPNQEALPPGFNLFSPPSRKKIK 125
>Z35663-11|CAA84732.2| 791|Caenorhabditis elegans Hypothetical
protein T04A8.13 protein.
Length = 791
Score = 29.9 bits (64), Expect = 1.4
Identities = 22/77 (28%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Frame = -3
Query: 479 KSTNKEXKITITNDKGRLSKEE-IERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKS 303
++ N E K +DK SKE+ E+ E + +NE+ K+++ + K+ E K
Sbjct: 102 ENENDEKKEKSKDDKKEESKEDKKEKTKTEDNEGKNEEKKKEKKEEKKDEKEK-----KE 156
Query: 302 TMEDEKLKEKISDSDKR 252
ED+K KEK +++
Sbjct: 157 KTEDDKEKEKEKTKEEK 173
Score = 27.9 bits (59), Expect = 5.8
Identities = 19/69 (27%), Positives = 34/69 (49%)
Frame = -3
Query: 479 KSTNKEXKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKST 300
K +E K ++K KE+ + N+ +K +++DDK++E+ + K E
Sbjct: 78 KEKKEEEKKEDGHEKKEDKKEDKKENENDEKKEKSKDDKKEESKEDKK--EKTKTEDNEG 135
Query: 299 MEDEKLKEK 273
+EK KEK
Sbjct: 136 KNEEKKKEK 144
Score = 27.5 bits (58), Expect = 7.7
Identities = 22/67 (32%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
Frame = -3
Query: 449 ITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQ--AKNALESYCFSMKSTMEDEKLKE 276
+ ++ L K+E E+ EAEK +NE +K++E + E K DEK KE
Sbjct: 53 LQDEFAELKKDE-EKDKEEAEKEKNEKEKKEEEKKEDGHEKKEDKKEDKKENENDEK-KE 110
Query: 275 KISDSDK 255
K D K
Sbjct: 111 KSKDDKK 117
>U88172-4|AAB42259.1| 224|Caenorhabditis elegans Hypothetical
protein ZK354.7 protein.
Length = 224
Score = 29.9 bits (64), Expect = 1.4
Identities = 20/72 (27%), Positives = 35/72 (48%)
Frame = -3
Query: 467 KEXKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDE 288
+E K +DK KEE + E +K +++K++E + KN + K +DE
Sbjct: 155 EEKKEDKKDDKKEAKKEEKKEEKKEEKKEEKKEEKKEEKKEEKN--DENKEEKKEEKKDE 212
Query: 287 KLKEKISDSDKR 252
K +EK + K+
Sbjct: 213 KKEEKKVEEAKK 224
>U13644-9|AAB52680.3| 492|Caenorhabditis elegans Cell death
abnormality protein 6 protein.
Length = 492
Score = 29.9 bits (64), Expect = 1.4
Identities = 15/29 (51%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
Frame = -3
Query: 107 SPEVCRASRAEH-PEPEVPPPGLEALAPP 24
SP V AS + P P +PPP ALAPP
Sbjct: 301 SPSVSPASTSPSGPAPSIPPPRPPALAPP 329
>AF061513-1|AAC24362.1| 492|Caenorhabditis elegans candidate
adaptor protein CED-6 protein.
Length = 492
Score = 29.9 bits (64), Expect = 1.4
Identities = 15/29 (51%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
Frame = -3
Query: 107 SPEVCRASRAEH-PEPEVPPPGLEALAPP 24
SP V AS + P P +PPP ALAPP
Sbjct: 301 SPSVSPASTSPSGPAPSIPPPRPPALAPP 329
>AC024791-2|AAK95891.1| 604|Caenorhabditis elegans Temporarily
assigned gene nameprotein 63 protein.
Length = 604
Score = 29.9 bits (64), Expect = 1.4
Identities = 13/34 (38%), Positives = 22/34 (64%)
Frame = -3
Query: 440 DKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAK 339
D+ L +EEIER+ E ++ +NE K + +QA+
Sbjct: 23 DESFLDEEEIERIKEELQRVQNEKKKHIQRMQAR 56
>U70852-1|AAK29815.1| 2361|Caenorhabditis elegans Hypothetical protein
F45E4.4 protein.
Length = 2361
Score = 29.5 bits (63), Expect = 1.9
Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 3/42 (7%)
Frame = -3
Query: 125 TRVPEESPEVCRASRAEHPEPE---VPPPGLEALAPPSRRSI 9
+R P SP ++ HP P + PPGLE L+ R+ I
Sbjct: 1408 SRQPSRSPSFVNPQQSFHPIPSFEPIVPPGLEDLSEEERQKI 1449
>U61954-8|AAM98018.1| 1005|Caenorhabditis elegans Hypothetical
protein F41H10.3b protein.
Length = 1005
Score = 29.5 bits (63), Expect = 1.9
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = -3
Query: 89 ASRAEHPEPEVPPPGLEALAPPSRR 15
A+R P+P+ PPP L PP RR
Sbjct: 678 AARDHPPQPQQPPPPLPTPKPPRRR 702
>U61954-7|AAK29803.1| 1140|Caenorhabditis elegans Hypothetical
protein F41H10.3a protein.
Length = 1140
Score = 29.5 bits (63), Expect = 1.9
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = -3
Query: 89 ASRAEHPEPEVPPPGLEALAPPSRR 15
A+R P+P+ PPP L PP RR
Sbjct: 678 AARDHPPQPQQPPPPLPTPKPPRRR 702
>AF067216-1|AAC17524.1| 301|Caenorhabditis elegans Hypothetical
protein C35E7.9 protein.
Length = 301
Score = 29.5 bits (63), Expect = 1.9
Identities = 19/75 (25%), Positives = 34/75 (45%)
Frame = -3
Query: 479 KSTNKEXKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKST 300
K K+ K ++ + K+E E+ + +K +DDK+ + A+ E K
Sbjct: 107 KEDKKDDKKDDKKEEKKEEKKEDEKEKGDDKKEDEKDDKKSGSKDAEKKEEKKEEEKKEE 166
Query: 299 MEDEKLKEKISDSDK 255
++EK +EK D K
Sbjct: 167 KKEEKKEEKKEDEKK 181
>AF016669-2|AAB66099.2| 455|Caenorhabditis elegans Hypothetical
protein K10G6.4 protein.
Length = 455
Score = 29.5 bits (63), Expect = 1.9
Identities = 17/60 (28%), Positives = 30/60 (50%), Gaps = 4/60 (6%)
Frame = -3
Query: 419 EEIERMVNEAEKYRNEDDK----QKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKR 252
+ IE + NE + N+ DK ++E ++ + L M + M+D K KEK + + R
Sbjct: 97 DTIEELQNELQDQNNQIDKLRIDRQELVKENDQLLEEIAEMSTKMDDYKRKEKAKEVEMR 156
>AC024875-7|AAK29987.2| 97|Caenorhabditis elegans Knl (kinetochore
null) bindingprotein protein 4 protein.
Length = 97
Score = 29.5 bits (63), Expect = 1.9
Identities = 15/52 (28%), Positives = 30/52 (57%), Gaps = 2/52 (3%)
Frame = -3
Query: 419 EEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDE--KLKEKI 270
+E +R + E + R +KQ E +Q + ++ + FS++ +DE K+ E+I
Sbjct: 45 DEADRKLEETLEKRKLVEKQLEDLQEQYKVKEFAFSLQKEFQDELKKVAEEI 96
>Z75553-4|CAA99946.1| 389|Caenorhabditis elegans Hypothetical
protein ZC443.4 protein.
Length = 389
Score = 29.1 bits (62), Expect = 2.5
Identities = 21/68 (30%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
Frame = -3
Query: 449 ITNDKGRLSK--EEIERMVNEAEKYRNEDDKQKETIQAKNALESYC-FSMKSTMEDEKLK 279
+ N+ + K E ++ + EAEK R EDD + + L S S KS EDE+ +
Sbjct: 218 VVNELSEVKKYCEILKAQMEEAEKRREEDDVANKLNEVVEKLISTAKDSGKSQKEDEEEE 277
Query: 278 EKISDSDK 255
+ D D+
Sbjct: 278 DDDDDDDE 285
>Z48178-7|CAE48493.1| 212|Caenorhabditis elegans Hypothetical
protein C05C10.5b protein.
Length = 212
Score = 29.1 bits (62), Expect = 2.5
Identities = 22/71 (30%), Positives = 31/71 (43%), Gaps = 3/71 (4%)
Frame = -3
Query: 209 PTSWPTRRSMSTSRKNWKAFTIR*LRRCTRVPEESPEVCRASRAEHPEPEVPPPGLEALA 30
P+ W R+ S K W+ R + E SP+V RA R PPP + +A
Sbjct: 32 PSGWT--RASELSEKGWRELLDRRRSQSPPPREPSPDVRRAIR------RTPPPRVNRVA 83
Query: 29 P---PSRRSIK 6
P P RR ++
Sbjct: 84 PIRLPERRPLR 94
>Z48178-6|CAA88203.1| 212|Caenorhabditis elegans Hypothetical
protein C05C10.5a protein.
Length = 212
Score = 29.1 bits (62), Expect = 2.5
Identities = 22/71 (30%), Positives = 31/71 (43%), Gaps = 3/71 (4%)
Frame = -3
Query: 209 PTSWPTRRSMSTSRKNWKAFTIR*LRRCTRVPEESPEVCRASRAEHPEPEVPPPGLEALA 30
P+ W R+ S K W+ R + E SP+V RA R PPP + +A
Sbjct: 32 PSGWT--RASELSEKGWRELLDRRRSQSPPPREPSPDVRRAIR------RTPPPRVNRVA 83
Query: 29 P---PSRRSIK 6
P P RR ++
Sbjct: 84 PIRLPERRPLR 94
>U13070-7|AAC46638.1| 414|Caenorhabditis elegans Rabaptin (rab
effector) protein 5 protein.
Length = 414
Score = 29.1 bits (62), Expect = 2.5
Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 4/57 (7%)
Frame = -3
Query: 470 NKEXKITITNDKGRLSKEEIERMVNEAEKYR----NEDDKQKETIQAKNALESYCFS 312
N E +T + R KEE++ + E+Y+ NE D +KE + N L + C +
Sbjct: 42 NYEVNLTALQENERKLKEEVKAAMELNERYQLDLSNERDYRKELEKKMNELSTNCLN 98
>X56213-1|CAA39670.1| 1651|Caenorhabditis elegans vitellogenin
protein.
Length = 1651
Score = 28.7 bits (61), Expect = 3.3
Identities = 14/56 (25%), Positives = 25/56 (44%)
Frame = -3
Query: 422 KEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDK 255
+EE ++ +N E R +DD+ E + CF+ K + + K + S K
Sbjct: 1535 EEEKDQEMNYEESRREQDDEPTEQVAIVERQHEICFTQKPVLRCQNGKSQESKKQK 1590
>U80032-4|AAL16309.2| 1553|Caenorhabditis elegans Hypothetical protein
C32E12.4 protein.
Length = 1553
Score = 28.7 bits (61), Expect = 3.3
Identities = 26/84 (30%), Positives = 42/84 (50%), Gaps = 11/84 (13%)
Frame = -3
Query: 473 TNKEXKITITNDKGRLSKEEIE----RMVNEAEKYRN--EDDKQKETIQAKNAL---ESY 321
T + K+ T ++ R K+E E R E E +N E++K K+ I+AK+ E
Sbjct: 996 TKIDTKLAPTEEEKRKKKQEEEEEKKRKEKELEMKKNKEEEEKLKKDIEAKSLAAGKEDK 1055
Query: 320 CFSMKST--MEDEKLKEKISDSDK 255
KS M+DE K+K++ +K
Sbjct: 1056 SALRKSALNMKDEDAKKKVATDEK 1079
>U41013-2|AAA82300.1| 557|Caenorhabditis elegans Hypothetical
protein T06C10.3 protein.
Length = 557
Score = 28.7 bits (61), Expect = 3.3
Identities = 18/50 (36%), Positives = 25/50 (50%)
Frame = -3
Query: 512 CXGILNVSAIXKSTNKEXKITITNDKGRLSKEEIERMVNEAEKYRNEDDK 363
C G L + TN + I +T LSK +I+ M+NEA RN + K
Sbjct: 278 CSGTLKLK---DGTNVDVAIKMTKVSAFLSKMKIKEMMNEARFIRNFNHK 324
>AF047659-3|AAC04423.2| 1650|Caenorhabditis elegans Vitellogenin
structural genes (yolk protein genes) protein 6, isoform
a protein.
Length = 1650
Score = 28.7 bits (61), Expect = 3.3
Identities = 14/56 (25%), Positives = 25/56 (44%)
Frame = -3
Query: 422 KEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDK 255
+EE ++ +N E R +DD+ E + CF+ K + + K + S K
Sbjct: 1535 EEEKDQEMNYEESRREQDDEPTEQVAIVERQHEICFTQKPVLRCQNGKSQESKKQK 1590
>AF047659-2|AAQ91901.1| 1651|Caenorhabditis elegans Vitellogenin
structural genes (yolk protein genes) protein 6, isoform
c protein.
Length = 1651
Score = 28.7 bits (61), Expect = 3.3
Identities = 14/56 (25%), Positives = 25/56 (44%)
Frame = -3
Query: 422 KEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDK 255
+EE ++ +N E R +DD+ E + CF+ K + + K + S K
Sbjct: 1535 EEEKDQEMNYEESRREQDDEPTEQVAIVERQHEICFTQKPVLRCQNGKSQESKKQK 1590
>AF039041-8|AAB94189.2| 448|Caenorhabditis elegans Hypothetical
protein W03F8.2 protein.
Length = 448
Score = 28.7 bits (61), Expect = 3.3
Identities = 18/50 (36%), Positives = 25/50 (50%)
Frame = -3
Query: 512 CXGILNVSAIXKSTNKEXKITITNDKGRLSKEEIERMVNEAEKYRNEDDK 363
C G L + TN + I +T LSK +I+ M+NEA RN + K
Sbjct: 334 CSGTLKLK---DGTNVDVAIKMTKVSAFLSKMKIKEMMNEARFIRNFNHK 380
>AF022982-4|AAB69938.1| 296|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 22 protein.
Length = 296
Score = 28.7 bits (61), Expect = 3.3
Identities = 20/53 (37%), Positives = 27/53 (50%)
Frame = -3
Query: 422 KEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISD 264
KEEIE + + EK NE+ KQK T+ K E + S + LK K S+
Sbjct: 140 KEEIEAIRRQLEKEVNEEVKQKATLM-KTEREKHQKSQEKLTPRLLLKWKTSE 191
>AL034393-27|CAH19090.1| 710|Caenorhabditis elegans Hypothetical
protein B0019.2 protein.
Length = 710
Score = 28.3 bits (60), Expect = 4.4
Identities = 11/44 (25%), Positives = 26/44 (59%)
Frame = -3
Query: 383 YRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKR 252
YR+E+D +KE +A + S+K T +++++++ ++ R
Sbjct: 17 YRSEEDSEKEDDKANEEKPQWFPSLKRTSKEKRMEKLFTNEQSR 60
>AL008866-2|CAA15508.2| 710|Caenorhabditis elegans Hypothetical
protein B0019.2 protein.
Length = 710
Score = 28.3 bits (60), Expect = 4.4
Identities = 11/44 (25%), Positives = 26/44 (59%)
Frame = -3
Query: 383 YRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKR 252
YR+E+D +KE +A + S+K T +++++++ ++ R
Sbjct: 17 YRSEEDSEKEDDKANEEKPQWFPSLKRTSKEKRMEKLFTNEQSR 60
>AC024838-6|AAF60823.1| 214|Caenorhabditis elegans Hypothetical
protein Y59E9AL.6 protein.
Length = 214
Score = 28.3 bits (60), Expect = 4.4
Identities = 19/74 (25%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
Frame = -3
Query: 467 KEXKITITNDKGRLSKEEI--ERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTME 294
K+ K + D+ + K+E E+ ++ E + +DDK+ + +AK+ + S KS
Sbjct: 120 KDEKKSDKKDEKKDDKKEKDEEKKDDKKEDEKKDDDKKDDKKEAKSKSKKSNKSKKSKKS 179
Query: 293 DEKLKEKISDSDKR 252
+ K+ D DK+
Sbjct: 180 KREKKDDKKDEDKK 193
>AC006791-7|AAF60740.2| 448|Caenorhabditis elegans Hypothetical
protein Y4C6A.1 protein.
Length = 448
Score = 28.3 bits (60), Expect = 4.4
Identities = 18/50 (36%), Positives = 25/50 (50%)
Frame = -3
Query: 512 CXGILNVSAIXKSTNKEXKITITNDKGRLSKEEIERMVNEAEKYRNEDDK 363
C G L + +N E I +T LSK +I+ M+NEA RN + K
Sbjct: 212 CSGTLKLK---DGSNVEVAIKMTKVSAFLSKMKIKEMMNEARFIRNFNHK 258
>Z99281-44|CAJ76963.1| 96|Caenorhabditis elegans Hypothetical
protein Y57G11C.52 protein.
Length = 96
Score = 27.9 bits (59), Expect = 5.8
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = -3
Query: 452 TITNDKGRLSKEEIERMVNEAEKYR 378
T N G LSKEE++ M++E+ K R
Sbjct: 70 TCVNGLGCLSKEEVQMMIDESNKPR 94
>U80447-4|AAB37808.1| 560|Caenorhabditis elegans Temporarily
assigned gene nameprotein 326 protein.
Length = 560
Score = 27.9 bits (59), Expect = 5.8
Identities = 14/47 (29%), Positives = 27/47 (57%)
Frame = -3
Query: 407 RMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKIS 267
+MV EA + ++ +DK++E ++ E + K+ + DEK K +S
Sbjct: 23 KMVWEARQKKSLEDKRQEELRVAYEKEQEILNNKALLGDEKAKMGLS 69
>U61954-5|AAK29812.1| 575|Caenorhabditis elegans Hypothetical
protein F41H10.4 protein.
Length = 575
Score = 27.9 bits (59), Expect = 5.8
Identities = 14/42 (33%), Positives = 24/42 (57%)
Frame = -3
Query: 449 ITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALES 324
+ + G LSKEE + + + +NE+ + +E I+ KNA S
Sbjct: 1 MATESGGLSKEEFLLVQEQLLQLKNENYELREEIKKKNAAAS 42
>DQ645890-1|ABG34266.1| 560|Caenorhabditis elegans CIR-1 protein.
Length = 560
Score = 27.9 bits (59), Expect = 5.8
Identities = 14/47 (29%), Positives = 27/47 (57%)
Frame = -3
Query: 407 RMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEKIS 267
+MV EA + ++ +DK++E ++ E + K+ + DEK K +S
Sbjct: 23 KMVWEARQKKSLEDKRQEELRVAYEKEQEILNNKALLGDEKAKMGLS 69
>AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 protein
protein.
Length = 10578
Score = 27.9 bits (59), Expect = 5.8
Identities = 20/76 (26%), Positives = 34/76 (44%), Gaps = 4/76 (5%)
Frame = -3
Query: 488 AIXKSTNKEXKITITND----KGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESY 321
A K KE K+ + D K K E+E+ + + K+++ + K LES
Sbjct: 9598 AAKKQKEKEDKLKLEADVASKKAAAEKLELEKQAQIKKAAEADAVKKQKELAEKQKLESE 9657
Query: 320 CFSMKSTMEDEKLKEK 273
+ K+ E KL+E+
Sbjct: 9658 AATKKAAAEKLKLEEQ 9673
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 27.9 bits (59), Expect = 5.8
Identities = 20/76 (26%), Positives = 34/76 (44%), Gaps = 4/76 (5%)
Frame = -3
Query: 488 AIXKSTNKEXKITITND----KGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESY 321
A K KE K+ + D K K E+E+ + + K+++ + K LES
Sbjct: 9618 AAKKQKEKEDKLKLEADVASKKAAAEKLELEKQAQIKKAAEADAVKKQKELAEKQKLESE 9677
Query: 320 CFSMKSTMEDEKLKEK 273
+ K+ E KL+E+
Sbjct: 9678 AATKKAAAEKLKLEEQ 9693
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 27.9 bits (59), Expect = 5.8
Identities = 20/76 (26%), Positives = 34/76 (44%), Gaps = 4/76 (5%)
Frame = -3
Query: 488 AIXKSTNKEXKITITND----KGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESY 321
A K KE K+ + D K K E+E+ + + K+++ + K LES
Sbjct: 9618 AAKKQKEKEDKLKLEADVASKKAAAEKLELEKQAQIKKAAEADAVKKQKELAEKQKLESE 9677
Query: 320 CFSMKSTMEDEKLKEK 273
+ K+ E KL+E+
Sbjct: 9678 AATKKAAAEKLKLEEQ 9693
>AF045641-4|AAO91715.1| 332|Caenorhabditis elegans Hypothetical
protein F53H1.4b protein.
Length = 332
Score = 27.9 bits (59), Expect = 5.8
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = -3
Query: 389 EKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEK 273
EK + +D+K+KE ++ K + K + +KLKEK
Sbjct: 202 EKQKEKDEKEKEKLEKKQKEQEEKKQKKEEEKAKKLKEK 240
>AF045641-3|AAO91716.1| 368|Caenorhabditis elegans Hypothetical
protein F53H1.4c protein.
Length = 368
Score = 27.9 bits (59), Expect = 5.8
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = -3
Query: 389 EKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEK 273
EK + +D+K+KE ++ K + K + +KLKEK
Sbjct: 238 EKQKEKDEKEKEKLEKKQKEQEEKKQKKEEEKAKKLKEK 276
>AF045641-2|AAC02578.2| 1370|Caenorhabditis elegans Hypothetical
protein F53H1.4a protein.
Length = 1370
Score = 27.9 bits (59), Expect = 5.8
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = -3
Query: 389 EKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKEK 273
EK + +D+K+KE ++ K + K + +KLKEK
Sbjct: 238 EKQKEKDEKEKEKLEKKQKEQEEKKQKKEEEKAKKLKEK 276
>AC006733-1|AAF60487.1| 610|Caenorhabditis elegans Hypothetical
protein Y32H12A.2 protein.
Length = 610
Score = 27.9 bits (59), Expect = 5.8
Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 3/65 (4%)
Frame = -3
Query: 464 EXKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETI--QAKNALESYCFSMKSTME- 294
E +I TND + SK+E E M ++ R ED+ +E I A LE + S++ +E
Sbjct: 299 EFRILGTNDTEKQSKDETEAM----KRKRKEDETTQEKINKMASELLEVHPMSLEFEIEC 354
Query: 293 DEKLK 279
E +K
Sbjct: 355 SENIK 359
>Z36753-10|CAA85341.1| 708|Caenorhabditis elegans Hypothetical
protein T09A5.12 protein.
Length = 708
Score = 27.5 bits (58), Expect = 7.7
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = -1
Query: 229 HHQVAGFQPAGRQGGV*AQAERIGRHLQSDNYEDVPGCRRSPRR 98
H V G G+ +Q +I + + NY+ +P CR +PRR
Sbjct: 18 HLPVQGPSTIASSNGLRSQQSKIIKRPPT-NYKSIPACRLAPRR 60
>AL032632-9|CAA21588.2| 1464|Caenorhabditis elegans Hypothetical
protein Y11D7A.14 protein.
Length = 1464
Score = 27.5 bits (58), Expect = 7.7
Identities = 12/48 (25%), Positives = 24/48 (50%)
Frame = -3
Query: 419 EEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMKSTMEDEKLKE 276
++I+ + E K +NE + + ++ K A+ + C E+LKE
Sbjct: 1077 KKIDELKEECRKRKNEASRLERKLEDKEAMMADCVKELKDSHKERLKE 1124
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,391,588
Number of Sequences: 27780
Number of extensions: 231972
Number of successful extensions: 1372
Number of sequences better than 10.0: 62
Number of HSP's better than 10.0 without gapping: 1170
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1348
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1268802960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -