Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0342.Seq
         (449 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY347952-1|AAR28375.1|  634|Anopheles gambiae putative sulfakini...    25   0.93 
AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta...    24   2.2  
DQ518576-1|ABF66618.1|  276|Anopheles gambiae putative cytoplasm...    23   5.0  

>AY347952-1|AAR28375.1|  634|Anopheles gambiae putative sulfakinin
           GPCR protein.
          Length = 634

 Score = 25.4 bits (53), Expect = 0.93
 Identities = 9/29 (31%), Positives = 17/29 (58%)
 Frame = -3

Query: 156 FCG*STPRSYRGSTRRLRHFYSNVVKLYF 70
           +CG +   +  G  R  RHF++ V+++ F
Sbjct: 441 YCGGAGCETRPGRLRGFRHFFAKVIRMLF 469


>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-containing
            phosphoprotein protein.
          Length = 1200

 Score = 24.2 bits (50), Expect = 2.2
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = +1

Query: 106  QSPSATSVGSGSRSPTKASAGPRTAS 183
            +S S +  GSGSRS +++ +G R  S
Sbjct: 1064 RSRSRSRSGSGSRSRSRSGSGSRAGS 1089



 Score = 22.6 bits (46), Expect = 6.6
 Identities = 10/26 (38%), Positives = 17/26 (65%)
 Frame = +1

Query: 109  SPSATSVGSGSRSPTKASAGPRTASG 186
            S + +  GSGSRS +++ +  R+ SG
Sbjct: 1085 SRAGSRAGSGSRSRSRSRSRSRSRSG 1110


>DQ518576-1|ABF66618.1|  276|Anopheles gambiae putative cytoplasmic
           carbonic anhydrase protein.
          Length = 276

 Score = 23.0 bits (47), Expect = 5.0
 Identities = 6/27 (22%), Positives = 16/27 (59%)
 Frame = -2

Query: 163 QKLLWVIYSQILQR*HSEIEAFLFKRC 83
           + + W+++ + ++  H ++E F   RC
Sbjct: 207 ESVTWILFKEPIEVSHEQLELFREMRC 233


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 391,235
Number of Sequences: 2352
Number of extensions: 6947
Number of successful extensions: 10
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 38268990
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)