Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0340.Seq
         (499 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q6AWT8 Cluster: At5g20635; n=1; Arabidopsis thaliana|Re...    35   0.88 
UniRef50_Q8RQS3 Cluster: Putative uncharacterized protein; n=1; ...    34   2.0  
UniRef50_Q1D1Q6 Cluster: Kelch domain protein; n=1; Myxococcus x...    34   2.0  
UniRef50_UPI00015B5959 Cluster: PREDICTED: similar to insulin re...    33   3.6  
UniRef50_UPI00006CDDD1 Cluster: hypothetical protein TTHERM_0029...    33   3.6  
UniRef50_Q7RFA7 Cluster: Putative uncharacterized protein PY0480...    33   4.7  
UniRef50_A2G0I1 Cluster: Putative uncharacterized protein; n=1; ...    32   6.2  
UniRef50_A6G0X3 Cluster: Putative uncharacterized protein; n=1; ...    32   8.2  
UniRef50_Q4GYI8 Cluster: Putative uncharacterized protein; n=1; ...    32   8.2  
UniRef50_Q4D7Q9 Cluster: Putative uncharacterized protein; n=2; ...    32   8.2  

>UniRef50_Q6AWT8 Cluster: At5g20635; n=1; Arabidopsis thaliana|Rep:
           At5g20635 - Arabidopsis thaliana (Mouse-ear cress)
          Length = 251

 Score = 35.1 bits (77), Expect = 0.88
 Identities = 13/45 (28%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
 Frame = +2

Query: 272 ACRRGCRTTAGSCYGRTAASCRCCGCS--WAAFLAVAAISICPIC 400
           +C R C  T  SC  +  +SC  C C   W++  +   + +C  C
Sbjct: 191 SCFRSCSCTRPSCLNKKKSSCCSCNCKIRWSSCFSCPKVRLCSCC 235


>UniRef50_Q8RQS3 Cluster: Putative uncharacterized protein; n=1;
           Lactobacillus acidophilus|Rep: Putative uncharacterized
           protein - Lactobacillus acidophilus
          Length = 141

 Score = 33.9 bits (74), Expect = 2.0
 Identities = 19/50 (38%), Positives = 27/50 (54%)
 Frame = +2

Query: 254 CSVLSTACRRGCRTTAGSCYGRTAASCRCCGCSWAAFLAVAAISICPICS 403
           CS+++T    G   +A +    T+ SCR C CS  A +AV  +S C  CS
Sbjct: 96  CSLVATTVGTGVAASAAA----TSESCRACACSTNATVAVVILS-CQPCS 140


>UniRef50_Q1D1Q6 Cluster: Kelch domain protein; n=1; Myxococcus
           xanthus DK 1622|Rep: Kelch domain protein - Myxococcus
           xanthus (strain DK 1622)
          Length = 1047

 Score = 33.9 bits (74), Expect = 2.0
 Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 5/42 (11%)
 Frame = +2

Query: 284 GCRTTAGSCYGRTAASCRC-----CGCSWAAFLAVAAISICP 394
           GCR + G+ +GR  AS RC     CGC  AA      ++ CP
Sbjct: 34  GCRASRGTSWGRCPASQRCSHSGRCGCWGAARSGAPFLTTCP 75


>UniRef50_UPI00015B5959 Cluster: PREDICTED: similar to insulin
           receptor; n=1; Nasonia vitripennis|Rep: PREDICTED:
           similar to insulin receptor - Nasonia vitripennis
          Length = 1714

 Score = 33.1 bits (72), Expect = 3.6
 Identities = 16/36 (44%), Positives = 20/36 (55%)
 Frame = +2

Query: 293 TTAGSCYGRTAASCRCCGCSWAAFLAVAAISICPIC 400
           TT   C     +SCRCC CS    L+ AA  +CP+C
Sbjct: 3   TTTSGCI--ETSSCRCCCCSCGRELSDAA-RLCPLC 35


>UniRef50_UPI00006CDDD1 Cluster: hypothetical protein
           TTHERM_00295570; n=1; Tetrahymena thermophila SB210|Rep:
           hypothetical protein TTHERM_00295570 - Tetrahymena
           thermophila SB210
          Length = 566

 Score = 33.1 bits (72), Expect = 3.6
 Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
 Frame = +2

Query: 200 KQNGVLYFFRFYHLKNQTCSVLSTACRRGCRTTAGSCYGRTAASCRCC--GCS 352
           K N + Y FR   + +Q C+ LS  C+ G   + G C     ASC+C   GC+
Sbjct: 208 KINELEYRFRDQDILSQACNPLS--CQCGINGSKGCCSSEGKASCQCASSGCN 258


>UniRef50_Q7RFA7 Cluster: Putative uncharacterized protein PY04800;
            n=3; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
            protein PY04800 - Plasmodium yoelii yoelii
          Length = 3038

 Score = 32.7 bits (71), Expect = 4.7
 Identities = 23/76 (30%), Positives = 39/76 (51%)
 Frame = +3

Query: 3    HSNTFFYWKVKYRIKTKTRVVNITSVYRSNGFV*SNIKA*GKIK*HCAKFKLDLFVQHRR 182
            H+NT  YW V Y+ KTK +++N+   Y    F  ++I     +K      K+ ++V +  
Sbjct: 1828 HNNTN-YWLVYYQRKTKKKIINLLKPYDKEIFGWTDIFKPKVVKFFLILKKVGIYVFYCN 1886

Query: 183  I*FNEISKTVYCIFLD 230
            +   +I K   CIFL+
Sbjct: 1887 V---DIVKEHNCIFLN 1899


>UniRef50_A2G0I1 Cluster: Putative uncharacterized protein; n=1;
           Trichomonas vaginalis G3|Rep: Putative uncharacterized
           protein - Trichomonas vaginalis G3
          Length = 219

 Score = 32.3 bits (70), Expect = 6.2
 Identities = 14/40 (35%), Positives = 20/40 (50%)
 Frame = +2

Query: 239 LKNQTCSVLSTACRRGCRTTAGSCYGRTAASCRCCGCSWA 358
           +KN+  ++     + GC  T G CY      CRCC  +WA
Sbjct: 79  VKNKIINIRGYYLKAGCCYT-GCCYEEVGYYCRCCLYTWA 117


>UniRef50_A6G0X3 Cluster: Putative uncharacterized protein; n=1;
           Plesiocystis pacifica SIR-1|Rep: Putative
           uncharacterized protein - Plesiocystis pacifica SIR-1
          Length = 503

 Score = 31.9 bits (69), Expect = 8.2
 Identities = 14/38 (36%), Positives = 22/38 (57%)
 Frame = -3

Query: 497 GRIGYRAPPXGXRVSISXDIEFAAARXPKRRWSKWGRW 384
           G++ YR+P  G R + S + E  +AR P+R   + G W
Sbjct: 303 GKLSYRSPVLGGRGASSENSEDPSARPPRRTQMRAGGW 340


>UniRef50_Q4GYI8 Cluster: Putative uncharacterized protein; n=1;
           Trypanosoma brucei|Rep: Putative uncharacterized protein
           - Trypanosoma brucei
          Length = 161

 Score = 31.9 bits (69), Expect = 8.2
 Identities = 11/21 (52%), Positives = 11/21 (52%)
 Frame = +2

Query: 287 CRTTAGSCYGRTAASCRCCGC 349
           CRTT  SC       C CCGC
Sbjct: 45  CRTTVVSCTSAFTTDCYCCGC 65


>UniRef50_Q4D7Q9 Cluster: Putative uncharacterized protein; n=2;
           Trypanosoma cruzi|Rep: Putative uncharacterized protein
           - Trypanosoma cruzi
          Length = 252

 Score = 31.9 bits (69), Expect = 8.2
 Identities = 20/45 (44%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
 Frame = +3

Query: 357 LPFWQLLQFPSAPFAPPSLWXPSGREFDIXAY---RYPXTSRGGP 482
           LPF Q  QFPS      S+W  S R F   AY   R P   R GP
Sbjct: 11  LPFRQFRQFPSVSCTSRSVWGCSIRLFGYSAYDSIRKPPKRRKGP 55


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 417,841,262
Number of Sequences: 1657284
Number of extensions: 6819573
Number of successful extensions: 17587
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 16659
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17560
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 29273652170
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)