Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0340.Seq
         (499 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069629-1|AAL39774.1|  274|Drosophila melanogaster LD40005p pro...    28   6.1  
BT015184-1|AAT94413.1|  589|Drosophila melanogaster RH67029p pro...    28   8.1  
AF039842-1|AAC04257.1|  591|Drosophila melanogaster Sprouty prot...    28   8.1  
AE014296-660|AAN11566.1|  589|Drosophila melanogaster CG1921-PC,...    28   8.1  
AE014296-659|AAF47772.1|  589|Drosophila melanogaster CG1921-PB,...    28   8.1  

>AY069629-1|AAL39774.1|  274|Drosophila melanogaster LD40005p
           protein.
          Length = 274

 Score = 28.3 bits (60), Expect = 6.1
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = +2

Query: 332 CRCCGCSWAAFLAV 373
           C CC CSWA  LA+
Sbjct: 94  CCCCSCSWAKCLAI 107


>BT015184-1|AAT94413.1|  589|Drosophila melanogaster RH67029p
           protein.
          Length = 589

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 12/23 (52%), Positives = 12/23 (52%), Gaps = 1/23 (4%)
 Frame = +2

Query: 281 RGCRTTAGSCYGRTAA-SCRCCG 346
           RGC      CYGR A   CRC G
Sbjct: 481 RGCMKLCEKCYGRFAGRGCRCQG 503


>AF039842-1|AAC04257.1|  591|Drosophila melanogaster Sprouty
           protein.
          Length = 591

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 12/23 (52%), Positives = 12/23 (52%), Gaps = 1/23 (4%)
 Frame = +2

Query: 281 RGCRTTAGSCYGRTAA-SCRCCG 346
           RGC      CYGR A   CRC G
Sbjct: 483 RGCMKLCEKCYGRFAGRGCRCQG 505


>AE014296-660|AAN11566.1|  589|Drosophila melanogaster CG1921-PC,
           isoform C protein.
          Length = 589

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 12/23 (52%), Positives = 12/23 (52%), Gaps = 1/23 (4%)
 Frame = +2

Query: 281 RGCRTTAGSCYGRTAA-SCRCCG 346
           RGC      CYGR A   CRC G
Sbjct: 481 RGCMKLCEKCYGRFAGRGCRCQG 503


>AE014296-659|AAF47772.1|  589|Drosophila melanogaster CG1921-PB,
           isoform B protein.
          Length = 589

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 12/23 (52%), Positives = 12/23 (52%), Gaps = 1/23 (4%)
 Frame = +2

Query: 281 RGCRTTAGSCYGRTAA-SCRCCG 346
           RGC      CYGR A   CRC G
Sbjct: 481 RGCMKLCEKCYGRFAGRGCRCQG 503


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,018,435
Number of Sequences: 53049
Number of extensions: 326044
Number of successful extensions: 936
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 874
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 936
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1763278080
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)