Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0338.Seq
(499 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X06869-1|CAA29993.1| 463|Drosophila melanogaster EF-1-alpha pro... 78 6e-15
M11744-1|AAA28526.1| 463|Drosophila melanogaster protein ( D.me... 78 6e-15
BT011039-1|AAR30199.1| 463|Drosophila melanogaster LP10071p pro... 78 6e-15
BT001873-1|AAN71645.1| 362|Drosophila melanogaster SD08285p pro... 78 6e-15
AY089522-1|AAL90260.1| 362|Drosophila melanogaster GM14559p pro... 78 6e-15
AE013599-1358|AAM68698.1| 463|Drosophila melanogaster CG8280-PB... 78 6e-15
AE013599-1357|AAF58608.1| 463|Drosophila melanogaster CG8280-PA... 78 6e-15
BT015202-1|AAT94431.1| 462|Drosophila melanogaster RE68984p pro... 77 2e-14
AE014297-4793|AAS65236.1| 462|Drosophila melanogaster CG1873-PD... 77 2e-14
AE014297-4792|AAS65235.1| 462|Drosophila melanogaster CG1873-PC... 77 2e-14
AE014297-4791|AAN14285.1| 462|Drosophila melanogaster CG1873-PB... 77 2e-14
AE014297-4790|AAF57185.1| 462|Drosophila melanogaster CG1873-PA... 77 2e-14
X06870-1|CAA29994.1| 462|Drosophila melanogaster EF-1-alpha pro... 73 3e-13
BT003766-1|AAO41445.1| 670|Drosophila melanogaster RE29053p pro... 40 0.001
AY060736-1|AAL28284.1| 194|Drosophila melanogaster GH18819p pro... 40 0.001
AE014296-376|AAF47584.2| 670|Drosophila melanogaster CG1898-PA ... 40 0.001
U88868-1|AAC24943.1| 619|Drosophila melanogaster elongation fac... 32 0.37
AY070979-1|AAL48601.1| 619|Drosophila melanogaster RE07731p pro... 32 0.37
AE014134-2205|AAF53194.1| 619|Drosophila melanogaster CG6382-PA... 32 0.37
AE014297-2568|AAF55584.1| 950|Drosophila melanogaster CG7709-PA... 29 2.6
>X06869-1|CAA29993.1| 463|Drosophila melanogaster EF-1-alpha
protein.
Length = 463
Score = 78.2 bits (184), Expect = 6e-15
Identities = 35/40 (87%), Positives = 38/40 (95%)
Frame = -1
Query: 475 TGKSTEVNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLG 356
+GK+TE NPK IKSGDAAIVNLVPSKPLCVE+FQEFPPLG
Sbjct: 383 SGKTTEENPKFIKSGDAAIVNLVPSKPLCVEAFQEFPPLG 422
Score = 58.0 bits (134), Expect = 7e-09
Identities = 28/33 (84%), Positives = 29/33 (87%)
Frame = -3
Query: 362 PRVXFAVRDMRQTVAVGVIKAVNFKEAGGGKVT 264
P FAVRDMRQTVAVGVIKAVNFK+A GGKVT
Sbjct: 420 PLGRFAVRDMRQTVAVGVIKAVNFKDASGGKVT 452
>M11744-1|AAA28526.1| 463|Drosophila melanogaster protein (
D.melanogaster 50 kDaprotein F1 gene, complete cds. ).
Length = 463
Score = 78.2 bits (184), Expect = 6e-15
Identities = 35/40 (87%), Positives = 38/40 (95%)
Frame = -1
Query: 475 TGKSTEVNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLG 356
+GK+TE NPK IKSGDAAIVNLVPSKPLCVE+FQEFPPLG
Sbjct: 383 SGKTTEENPKFIKSGDAAIVNLVPSKPLCVEAFQEFPPLG 422
Score = 58.0 bits (134), Expect = 7e-09
Identities = 28/33 (84%), Positives = 29/33 (87%)
Frame = -3
Query: 362 PRVXFAVRDMRQTVAVGVIKAVNFKEAGGGKVT 264
P FAVRDMRQTVAVGVIKAVNFK+A GGKVT
Sbjct: 420 PLGRFAVRDMRQTVAVGVIKAVNFKDASGGKVT 452
>BT011039-1|AAR30199.1| 463|Drosophila melanogaster LP10071p
protein.
Length = 463
Score = 78.2 bits (184), Expect = 6e-15
Identities = 35/40 (87%), Positives = 38/40 (95%)
Frame = -1
Query: 475 TGKSTEVNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLG 356
+GK+TE NPK IKSGDAAIVNLVPSKPLCVE+FQEFPPLG
Sbjct: 383 SGKTTEENPKFIKSGDAAIVNLVPSKPLCVEAFQEFPPLG 422
Score = 58.0 bits (134), Expect = 7e-09
Identities = 28/33 (84%), Positives = 29/33 (87%)
Frame = -3
Query: 362 PRVXFAVRDMRQTVAVGVIKAVNFKEAGGGKVT 264
P FAVRDMRQTVAVGVIKAVNFK+A GGKVT
Sbjct: 420 PLGRFAVRDMRQTVAVGVIKAVNFKDASGGKVT 452
>BT001873-1|AAN71645.1| 362|Drosophila melanogaster SD08285p
protein.
Length = 362
Score = 78.2 bits (184), Expect = 6e-15
Identities = 35/40 (87%), Positives = 38/40 (95%)
Frame = -1
Query: 475 TGKSTEVNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLG 356
+GK+TE NPK IKSGDAAIVNLVPSKPLCVE+FQEFPPLG
Sbjct: 282 SGKTTEENPKFIKSGDAAIVNLVPSKPLCVEAFQEFPPLG 321
Score = 58.0 bits (134), Expect = 7e-09
Identities = 28/33 (84%), Positives = 29/33 (87%)
Frame = -3
Query: 362 PRVXFAVRDMRQTVAVGVIKAVNFKEAGGGKVT 264
P FAVRDMRQTVAVGVIKAVNFK+A GGKVT
Sbjct: 319 PLGRFAVRDMRQTVAVGVIKAVNFKDASGGKVT 351
>AY089522-1|AAL90260.1| 362|Drosophila melanogaster GM14559p
protein.
Length = 362
Score = 78.2 bits (184), Expect = 6e-15
Identities = 35/40 (87%), Positives = 38/40 (95%)
Frame = -1
Query: 475 TGKSTEVNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLG 356
+GK+TE NPK IKSGDAAIVNLVPSKPLCVE+FQEFPPLG
Sbjct: 282 SGKTTEENPKFIKSGDAAIVNLVPSKPLCVEAFQEFPPLG 321
Score = 58.0 bits (134), Expect = 7e-09
Identities = 28/33 (84%), Positives = 29/33 (87%)
Frame = -3
Query: 362 PRVXFAVRDMRQTVAVGVIKAVNFKEAGGGKVT 264
P FAVRDMRQTVAVGVIKAVNFK+A GGKVT
Sbjct: 319 PLGRFAVRDMRQTVAVGVIKAVNFKDASGGKVT 351
>AE013599-1358|AAM68698.1| 463|Drosophila melanogaster CG8280-PB,
isoform B protein.
Length = 463
Score = 78.2 bits (184), Expect = 6e-15
Identities = 35/40 (87%), Positives = 38/40 (95%)
Frame = -1
Query: 475 TGKSTEVNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLG 356
+GK+TE NPK IKSGDAAIVNLVPSKPLCVE+FQEFPPLG
Sbjct: 383 SGKTTEENPKFIKSGDAAIVNLVPSKPLCVEAFQEFPPLG 422
Score = 58.0 bits (134), Expect = 7e-09
Identities = 28/33 (84%), Positives = 29/33 (87%)
Frame = -3
Query: 362 PRVXFAVRDMRQTVAVGVIKAVNFKEAGGGKVT 264
P FAVRDMRQTVAVGVIKAVNFK+A GGKVT
Sbjct: 420 PLGRFAVRDMRQTVAVGVIKAVNFKDASGGKVT 452
>AE013599-1357|AAF58608.1| 463|Drosophila melanogaster CG8280-PA,
isoform A protein.
Length = 463
Score = 78.2 bits (184), Expect = 6e-15
Identities = 35/40 (87%), Positives = 38/40 (95%)
Frame = -1
Query: 475 TGKSTEVNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLG 356
+GK+TE NPK IKSGDAAIVNLVPSKPLCVE+FQEFPPLG
Sbjct: 383 SGKTTEENPKFIKSGDAAIVNLVPSKPLCVEAFQEFPPLG 422
Score = 58.0 bits (134), Expect = 7e-09
Identities = 28/33 (84%), Positives = 29/33 (87%)
Frame = -3
Query: 362 PRVXFAVRDMRQTVAVGVIKAVNFKEAGGGKVT 264
P FAVRDMRQTVAVGVIKAVNFK+A GGKVT
Sbjct: 420 PLGRFAVRDMRQTVAVGVIKAVNFKDASGGKVT 452
>BT015202-1|AAT94431.1| 462|Drosophila melanogaster RE68984p
protein.
Length = 462
Score = 76.6 bits (180), Expect = 2e-14
Identities = 34/40 (85%), Positives = 37/40 (92%)
Frame = -1
Query: 475 TGKSTEVNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLG 356
TGK+TE PK+IKSGDAAI+ LVPSKPLCVESFQEFPPLG
Sbjct: 383 TGKTTETEPKAIKSGDAAIIVLVPSKPLCVESFQEFPPLG 422
Score = 53.2 bits (122), Expect = 2e-07
Identities = 26/33 (78%), Positives = 27/33 (81%)
Frame = -3
Query: 362 PRVXFAVRDMRQTVAVGVIKAVNFKEAGGGKVT 264
P FAVRDMRQTVAVGVIK+VNFKE GKVT
Sbjct: 420 PLGRFAVRDMRQTVAVGVIKSVNFKETTSGKVT 452
>AE014297-4793|AAS65236.1| 462|Drosophila melanogaster CG1873-PD,
isoform D protein.
Length = 462
Score = 76.6 bits (180), Expect = 2e-14
Identities = 34/40 (85%), Positives = 37/40 (92%)
Frame = -1
Query: 475 TGKSTEVNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLG 356
TGK+TE PK+IKSGDAAI+ LVPSKPLCVESFQEFPPLG
Sbjct: 383 TGKTTETEPKAIKSGDAAIIVLVPSKPLCVESFQEFPPLG 422
Score = 53.2 bits (122), Expect = 2e-07
Identities = 26/33 (78%), Positives = 27/33 (81%)
Frame = -3
Query: 362 PRVXFAVRDMRQTVAVGVIKAVNFKEAGGGKVT 264
P FAVRDMRQTVAVGVIK+VNFKE GKVT
Sbjct: 420 PLGRFAVRDMRQTVAVGVIKSVNFKETTSGKVT 452
>AE014297-4792|AAS65235.1| 462|Drosophila melanogaster CG1873-PC,
isoform C protein.
Length = 462
Score = 76.6 bits (180), Expect = 2e-14
Identities = 34/40 (85%), Positives = 37/40 (92%)
Frame = -1
Query: 475 TGKSTEVNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLG 356
TGK+TE PK+IKSGDAAI+ LVPSKPLCVESFQEFPPLG
Sbjct: 383 TGKTTETEPKAIKSGDAAIIVLVPSKPLCVESFQEFPPLG 422
Score = 53.2 bits (122), Expect = 2e-07
Identities = 26/33 (78%), Positives = 27/33 (81%)
Frame = -3
Query: 362 PRVXFAVRDMRQTVAVGVIKAVNFKEAGGGKVT 264
P FAVRDMRQTVAVGVIK+VNFKE GKVT
Sbjct: 420 PLGRFAVRDMRQTVAVGVIKSVNFKETTSGKVT 452
>AE014297-4791|AAN14285.1| 462|Drosophila melanogaster CG1873-PB,
isoform B protein.
Length = 462
Score = 76.6 bits (180), Expect = 2e-14
Identities = 34/40 (85%), Positives = 37/40 (92%)
Frame = -1
Query: 475 TGKSTEVNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLG 356
TGK+TE PK+IKSGDAAI+ LVPSKPLCVESFQEFPPLG
Sbjct: 383 TGKTTETEPKAIKSGDAAIIVLVPSKPLCVESFQEFPPLG 422
Score = 53.2 bits (122), Expect = 2e-07
Identities = 26/33 (78%), Positives = 27/33 (81%)
Frame = -3
Query: 362 PRVXFAVRDMRQTVAVGVIKAVNFKEAGGGKVT 264
P FAVRDMRQTVAVGVIK+VNFKE GKVT
Sbjct: 420 PLGRFAVRDMRQTVAVGVIKSVNFKETTSGKVT 452
>AE014297-4790|AAF57185.1| 462|Drosophila melanogaster CG1873-PA,
isoform A protein.
Length = 462
Score = 76.6 bits (180), Expect = 2e-14
Identities = 34/40 (85%), Positives = 37/40 (92%)
Frame = -1
Query: 475 TGKSTEVNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLG 356
TGK+TE PK+IKSGDAAI+ LVPSKPLCVESFQEFPPLG
Sbjct: 383 TGKTTETEPKAIKSGDAAIIVLVPSKPLCVESFQEFPPLG 422
Score = 53.2 bits (122), Expect = 2e-07
Identities = 26/33 (78%), Positives = 27/33 (81%)
Frame = -3
Query: 362 PRVXFAVRDMRQTVAVGVIKAVNFKEAGGGKVT 264
P FAVRDMRQTVAVGVIK+VNFKE GKVT
Sbjct: 420 PLGRFAVRDMRQTVAVGVIKSVNFKETTSGKVT 452
>X06870-1|CAA29994.1| 462|Drosophila melanogaster EF-1-alpha
protein.
Length = 462
Score = 72.5 bits (170), Expect = 3e-13
Identities = 33/40 (82%), Positives = 36/40 (90%)
Frame = -1
Query: 475 TGKSTEVNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLG 356
TG +TE PK+IKSGDAAI+ LVPSKPLCVESFQEFPPLG
Sbjct: 383 TGGTTEDGPKAIKSGDAAIIVLVPSKPLCVESFQEFPPLG 422
Score = 53.2 bits (122), Expect = 2e-07
Identities = 26/33 (78%), Positives = 27/33 (81%)
Frame = -3
Query: 362 PRVXFAVRDMRQTVAVGVIKAVNFKEAGGGKVT 264
P FAVRDMRQTVAVGVIK+VNFKE GKVT
Sbjct: 420 PLGRFAVRDMRQTVAVGVIKSVNFKETTSGKVT 452
>BT003766-1|AAO41445.1| 670|Drosophila melanogaster RE29053p
protein.
Length = 670
Score = 40.3 bits (90), Expect = 0.001
Identities = 16/46 (34%), Positives = 28/46 (60%)
Frame = -1
Query: 475 TGKSTEVNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGSVLLSV 338
TG+ + P+ + + A+V L S+P+C+E + +F LG V+L V
Sbjct: 611 TGEVVKKKPRCLGNNSCALVELETSRPICIERYADFKELGRVMLRV 656
>AY060736-1|AAL28284.1| 194|Drosophila melanogaster GH18819p
protein.
Length = 194
Score = 40.3 bits (90), Expect = 0.001
Identities = 16/46 (34%), Positives = 28/46 (60%)
Frame = -1
Query: 475 TGKSTEVNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGSVLLSV 338
TG+ + P+ + + A+V L S+P+C+E + +F LG V+L V
Sbjct: 135 TGEVVKKKPRCLGNNSCALVELETSRPICIERYADFKELGRVMLRV 180
>AE014296-376|AAF47584.2| 670|Drosophila melanogaster CG1898-PA
protein.
Length = 670
Score = 40.3 bits (90), Expect = 0.001
Identities = 16/46 (34%), Positives = 28/46 (60%)
Frame = -1
Query: 475 TGKSTEVNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGSVLLSV 338
TG+ + P+ + + A+V L S+P+C+E + +F LG V+L V
Sbjct: 611 TGEVVKKKPRCLGNNSCALVELETSRPICIERYADFKELGRVMLRV 656
>U88868-1|AAC24943.1| 619|Drosophila melanogaster elongation factor
1 alpha-likefactor protein.
Length = 619
Score = 32.3 bits (70), Expect = 0.37
Identities = 13/44 (29%), Positives = 24/44 (54%)
Frame = -1
Query: 475 TGKSTEVNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGSVLL 344
+G ++ P+ +K AI+ + S +C+E F+ FP +G L
Sbjct: 559 SGDKSKTRPRFVKQDQVAIMRIECSGMICLEQFKLFPQMGRFTL 602
>AY070979-1|AAL48601.1| 619|Drosophila melanogaster RE07731p
protein.
Length = 619
Score = 32.3 bits (70), Expect = 0.37
Identities = 13/44 (29%), Positives = 24/44 (54%)
Frame = -1
Query: 475 TGKSTEVNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGSVLL 344
+G ++ P+ +K AI+ + S +C+E F+ FP +G L
Sbjct: 559 SGDKSKTRPRFVKQDQVAIMRIECSGMICLEQFKLFPQMGRFTL 602
>AE014134-2205|AAF53194.1| 619|Drosophila melanogaster CG6382-PA
protein.
Length = 619
Score = 32.3 bits (70), Expect = 0.37
Identities = 13/44 (29%), Positives = 24/44 (54%)
Frame = -1
Query: 475 TGKSTEVNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGSVLL 344
+G ++ P+ +K AI+ + S +C+E F+ FP +G L
Sbjct: 559 SGDKSKTRPRFVKQDQVAIMRIECSGMICLEQFKLFPQMGRFTL 602
>AE014297-2568|AAF55584.1| 950|Drosophila melanogaster CG7709-PA
protein.
Length = 950
Score = 29.5 bits (63), Expect = 2.6
Identities = 18/45 (40%), Positives = 21/45 (46%)
Frame = -2
Query: 456 STQNPSSLEMQPLSTWYLPSLYV*SPSRNSHPSGXFCCP*HEADS 322
S Q PSS P + YLP +PS NS PS + P A S
Sbjct: 129 SPQRPSSKYGAPPVSSYLPPASGPAPSFNSAPSSSYAAPSQSASS 173
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,089,242
Number of Sequences: 53049
Number of extensions: 370392
Number of successful extensions: 940
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 911
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 940
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1763278080
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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