Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0334.Seq
         (578 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT001338-1|AAN71093.1|  501|Drosophila melanogaster AT21229p pro...    31   1.1  
AE014297-4739|AAN14270.1|  501|Drosophila melanogaster CG31003-P...    31   1.1  
AY119091-1|AAM50951.1|  533|Drosophila melanogaster LP12003p pro...    29   6.0  
AE013599-3361|AAF46821.1|  533|Drosophila melanogaster CG3264-PA...    29   6.0  

>BT001338-1|AAN71093.1|  501|Drosophila melanogaster AT21229p
           protein.
          Length = 501

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 13/31 (41%), Positives = 19/31 (61%)
 Frame = +3

Query: 141 LQYDLGHGNRTDVGRSPTADVTTQQVHVCAQ 233
           LQ+DLG+G+   VG  P   +T +Q H  A+
Sbjct: 415 LQHDLGNGDHVAVGTMPMEPLTLEQNHFAAE 445


>AE014297-4739|AAN14270.1|  501|Drosophila melanogaster CG31003-PA
           protein.
          Length = 501

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 13/31 (41%), Positives = 19/31 (61%)
 Frame = +3

Query: 141 LQYDLGHGNRTDVGRSPTADVTTQQVHVCAQ 233
           LQ+DLG+G+   VG  P   +T +Q H  A+
Sbjct: 415 LQHDLGNGDHVAVGTMPMEPLTLEQNHFAAE 445


>AY119091-1|AAM50951.1|  533|Drosophila melanogaster LP12003p
           protein.
          Length = 533

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 13/39 (33%), Positives = 22/39 (56%)
 Frame = -1

Query: 380 RGTPQSEVTPHESCFSGVQPAPSNYKTFSRQNMDDDVRR 264
           RGTP   +  H++  +GVQ +  NY     Q +D++ +R
Sbjct: 425 RGTPILGINQHDTDINGVQYSVLNYAAGPNQYLDENGQR 463


>AE013599-3361|AAF46821.1|  533|Drosophila melanogaster CG3264-PA
           protein.
          Length = 533

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 13/39 (33%), Positives = 22/39 (56%)
 Frame = -1

Query: 380 RGTPQSEVTPHESCFSGVQPAPSNYKTFSRQNMDDDVRR 264
           RGTP   +  H++  +GVQ +  NY     Q +D++ +R
Sbjct: 425 RGTPILGINQHDTDINGVQYSVLNYAAGPNQYLDENGQR 463


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,260,247
Number of Sequences: 53049
Number of extensions: 563716
Number of successful extensions: 1812
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1762
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1812
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2296745289
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)