Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0333.Seq
         (528 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    30   0.011
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    25   0.41 
EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxyla...    23   1.7  
EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic hor...    21   5.1  
DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic hor...    21   5.1  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    21   8.9  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    21   8.9  

>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 30.3 bits (65), Expect = 0.011
 Identities = 10/28 (35%), Positives = 17/28 (60%)
 Frame = -3

Query: 172 NAFRFEGRGSRCNYTEILELISQGGWRI 89
           N+ ++ G      Y EI+EL  +GGW++
Sbjct: 286 NSGKYTGEAGMLGYNEIVELQKEGGWKV 313


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 25.0 bits (52), Expect = 0.41
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = -3

Query: 172 NAFRFEGRGSRCNYTEILELISQGGW 95
           +A R+ G      Y EI+E  + GGW
Sbjct: 290 DAGRYTGERGMMGYNEIVEAQNAGGW 315


>EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxylase
           protein.
          Length = 475

 Score = 23.0 bits (47), Expect = 1.7
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = +1

Query: 211 ICADSQEVLSPVITHL*FYGFHLYY 285
           + AD + V+ P +TH     FH Y+
Sbjct: 56  VMADIERVIMPGVTHWHSPRFHAYF 80


>EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 21.4 bits (43), Expect = 5.1
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = +1

Query: 472 VNRRTSEPYGD 504
           + RRT  PYGD
Sbjct: 246 IRRRTRNPYGD 256


>DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 21.4 bits (43), Expect = 5.1
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = +1

Query: 472 VNRRTSEPYGD 504
           + RRT  PYGD
Sbjct: 246 IRRRTRNPYGD 256


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 20.6 bits (41), Expect = 8.9
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = -3

Query: 421 CMQLEQRPXRQT*AIVPIPQCTNFANE 341
           CM+ E  P ++   IV   QC +  NE
Sbjct: 62  CMKCECVPLQKKRRIVARVQCRSIKNE 88


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 20.6 bits (41), Expect = 8.9
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = -1

Query: 405 SAPSGKLKQSFQFLSVPILLMNYVLKKC 322
           S+P   LK+S  F +   L   + L+KC
Sbjct: 239 SSPFESLKKSLNFRTPSCLETFHTLEKC 266


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 115,913
Number of Sequences: 336
Number of extensions: 2264
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12782794
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)