Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0332.Seq
         (548 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    31   0.005
AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    22   4.1  
AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6 prot...    21   5.4  
AF264721-1|AAF75273.1|  126|Tribolium castaneum putative cytochr...    21   9.4  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 31.5 bits (68), Expect = 0.005
 Identities = 15/51 (29%), Positives = 20/51 (39%)
 Frame = -1

Query: 338 TDDMLRKRVSITADAVHRQRGAQMQLRAFNRNNFSIRYWSWNYRGCWHQTC 186
           TD    K   +  D   R+R     +    R+NF   +  WNY  CW   C
Sbjct: 716 TDSAGDKYSRLVGDGSARRRFVVAVVGFLRRHNFKGLHLDWNYPVCWQSNC 766



 Score = 23.0 bits (47), Expect = 1.8
 Identities = 8/20 (40%), Positives = 8/20 (40%)
 Frame = -1

Query: 245  NNFSIRYWSWNYRGCWHQTC 186
            NNF      W Y  CW   C
Sbjct: 1935 NNFDGLDLDWEYPKCWQVDC 1954



 Score = 21.8 bits (44), Expect = 4.1
 Identities = 10/34 (29%), Positives = 13/34 (38%)
 Frame = -1

Query: 287  RQRGAQMQLRAFNRNNFSIRYWSWNYRGCWHQTC 186
            R R  +  L+   + NF      W Y  CW   C
Sbjct: 1496 RARFIKHVLQFLEKWNFDGLDLDWEYPKCWQVDC 1529



 Score = 20.6 bits (41), Expect = 9.4
 Identities = 7/19 (36%), Positives = 7/19 (36%)
 Frame = -1

Query: 242  NFSIRYWSWNYRGCWHQTC 186
            NF      W Y  CW   C
Sbjct: 2434 NFDGLDLDWEYPKCWQVDC 2452


>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 5/16 (31%), Positives = 9/16 (56%)
 Frame = -1

Query: 239 FSIRYWSWNYRGCWHQ 192
           +++ YW   Y   WH+
Sbjct: 117 YAVYYWRQQYEDFWHR 132


>AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6
           protein.
          Length = 377

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 11/34 (32%), Positives = 14/34 (41%)
 Frame = -1

Query: 311 SITADAVHRQRGAQMQLRAFNRNNFSIRYWSWNY 210
           ++ ADA  R   A+  L  F   NF      W Y
Sbjct: 111 AVAADATKRATMAKSALEFFETYNFDGLDVDWEY 144


>AF264721-1|AAF75273.1|  126|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q2 protein.
          Length = 126

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = +1

Query: 367 NIKILSRCSSVSVEVGPTILL 429
           N+K L RC   S+ + P++ L
Sbjct: 44  NLKYLERCIKESLRLYPSVHL 64


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 125,712
Number of Sequences: 336
Number of extensions: 2628
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13516233
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)