Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0329.Seq
(598 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9VUZ0 Cluster: CG5474-PA; n=11; Arthropoda|Rep: CG5474... 113 4e-24
UniRef50_Q09JT6 Cluster: Translocon associated complex TRAP beta... 88 2e-16
UniRef50_P43308 Cluster: Translocon-associated protein subunit b... 86 7e-16
UniRef50_A7SSC3 Cluster: Predicted protein; n=1; Nematostella ve... 76 6e-13
UniRef50_Q22169 Cluster: Putative uncharacterized protein; n=2; ... 58 1e-07
UniRef50_Q5DES5 Cluster: SJCHGC05940 protein; n=1; Schistosoma j... 51 2e-05
UniRef50_Q54VI6 Cluster: Putative uncharacterized protein; n=1; ... 37 0.41
UniRef50_Q0JRG3 Cluster: Os01g0102700 protein; n=9; Magnoliophyt... 36 0.96
UniRef50_Q2UDT3 Cluster: Chitinase; n=2; Aspergillus|Rep: Chitin... 36 0.96
UniRef50_A5JZ01 Cluster: Cytoadherence linked asexual protein, C... 35 1.3
UniRef50_UPI0000DD8547 Cluster: PREDICTED: similar to CEA-relate... 35 1.7
UniRef50_Q89KM4 Cluster: Bll4881 protein; n=2; Bradyrhizobium|Re... 35 1.7
UniRef50_Q7UYS3 Cluster: Putative uncharacterized protein; n=1; ... 35 1.7
UniRef50_A3Q4D1 Cluster: AMP-dependent synthetase and ligase; n=... 34 2.9
UniRef50_Q4K678 Cluster: Spermidine/putrescine ABC transporter, ... 33 5.1
UniRef50_UPI00015B50D8 Cluster: PREDICTED: hypothetical protein;... 33 6.7
UniRef50_Q10N14 Cluster: RNA recognition motif family protein, e... 32 8.9
UniRef50_Q00W22 Cluster: Chromosome 14 contig 1, DNA sequence; n... 32 8.9
>UniRef50_Q9VUZ0 Cluster: CG5474-PA; n=11; Arthropoda|Rep: CG5474-PA
- Drosophila melanogaster (Fruit fly)
Length = 190
Score = 113 bits (271), Expect = 4e-24
Identities = 49/84 (58%), Positives = 66/84 (78%)
Frame = +1
Query: 1 LVDNGFHPDVFTVVGGQLTAEIDRIAPQTNVSHVVTVRSNKYGYFNFSSAEVTYKASEDA 180
LVD+GFHP+ F VVGGQ TA +DRIAPQTN +HV+ VR +GYFNF++AEV+YKA E++
Sbjct: 64 LVDSGFHPEAFDVVGGQPTAVVDRIAPQTNFTHVLVVRPKAFGYFNFTAAEVSYKAVEES 123
Query: 181 TDVQYSISSAPGEGAIVAFKDYDR 252
+Q ++SS PGEG IV +Y++
Sbjct: 124 ETLQLAVSSEPGEGGIVNLNEYNK 147
Score = 52.4 bits (120), Expect = 8e-06
Identities = 21/28 (75%), Positives = 23/28 (82%)
Frame = +3
Query: 252 KFSSHILDWAAFAVMTLPSLAIPFGLWY 335
+FSSH DW AFAVMTLPSLAIP LW+
Sbjct: 148 RFSSHFFDWVAFAVMTLPSLAIPLALWH 175
>UniRef50_Q09JT6 Cluster: Translocon associated complex TRAP
beta-subunit; n=1; Argas monolakensis|Rep: Translocon
associated complex TRAP beta-subunit - Argas
monolakensis
Length = 202
Score = 87.8 bits (208), Expect = 2e-16
Identities = 44/90 (48%), Positives = 59/90 (65%), Gaps = 1/90 (1%)
Frame = +1
Query: 1 LVDNGFHPDVFTVVGGQLTAEIDRIAPQTNVSHVVTVRSNKYGYFNFSSAEVTYKASEDA 180
+VD+ F D F VV G L ++DR+ P N+SH V VRS+K G FNF+ AEV Y+ SE+
Sbjct: 62 IVDSSFGGD-FQVVSGLLDLKVDRLPPNANLSHTVVVRSSKPGRFNFTGAEVYYRTSEEG 120
Query: 181 TDVQYSISSAPGEGAIVAFKDYDRN-SPRI 267
+VQ +S PGEG IV +D+DR SP +
Sbjct: 121 REVQVGHTSEPGEGGIVPGRDFDRQFSPHV 150
Score = 33.9 bits (74), Expect = 2.9
Identities = 12/18 (66%), Positives = 16/18 (88%)
Frame = +3
Query: 252 KFSSHILDWAAFAVMTLP 305
+FS H++DW AFAVM+LP
Sbjct: 145 QFSPHVMDWLAFAVMSLP 162
>UniRef50_P43308 Cluster: Translocon-associated protein subunit beta
precursor; n=33; Coelomata|Rep: Translocon-associated
protein subunit beta precursor - Homo sapiens (Human)
Length = 183
Score = 85.8 bits (203), Expect = 7e-16
Identities = 42/84 (50%), Positives = 56/84 (66%)
Frame = +1
Query: 1 LVDNGFHPDVFTVVGGQLTAEIDRIAPQTNVSHVVTVRSNKYGYFNFSSAEVTYKASEDA 180
L D+ F P+ F +V G L + DRIAP +NVSH V +R K GYFNF+SA +TY A ED
Sbjct: 59 LSDDSFPPEDFGIVSGMLNVKWDRIAPASNVSHTVVLRPLKAGYFNFTSATITYLAQEDG 118
Query: 181 TDVQYSISSAPGEGAIVAFKDYDR 252
V +SAPG+G I+A +++DR
Sbjct: 119 -PVVIGSTSAPGQGGILAQREFDR 141
Score = 50.0 bits (114), Expect = 4e-05
Identities = 20/28 (71%), Positives = 22/28 (78%)
Frame = +3
Query: 252 KFSSHILDWAAFAVMTLPSLAIPFGLWY 335
+FS H LDWAAF VMTLPS+ IP LWY
Sbjct: 142 RFSPHFLDWAAFGVMTLPSIGIPLLLWY 169
>UniRef50_A7SSC3 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 187
Score = 76.2 bits (179), Expect = 6e-13
Identities = 48/126 (38%), Positives = 72/126 (57%), Gaps = 3/126 (2%)
Frame = +1
Query: 1 LVDNGFHPDVFTVVGGQLTAEIDRIAPQTNVSHVVTVRSNKYGYFNFSSAEVTYKASEDA 180
L + F + F V G + + I P TNVSH + + K G FNF+SA VTYK SEDA
Sbjct: 63 LTETAFDENSFKVKHGLTSIKWKSIVPGTNVSHTLILEPLKSGVFNFTSAMVTYKPSEDA 122
Query: 181 TDVQYSISSAPGEGAIVAFKDYDR-NSPRISSIGRHSQL-*PSRP*PFHLASGTHQR-AN 351
+ Q + S+APGEG +++ KDY R +SP + G S + P+ PF + +H + N
Sbjct: 123 PE-QVAFSTAPGEGGVMSNKDYQRKHSPHLVDWGLFSLMSIPTMLIPFMVWYRSHSKYEN 181
Query: 352 MRSFQN 369
+++ +N
Sbjct: 182 IKAKKN 187
>UniRef50_Q22169 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 188
Score = 58.4 bits (135), Expect = 1e-07
Identities = 27/81 (33%), Positives = 48/81 (59%)
Frame = +1
Query: 10 NGFHPDVFTVVGGQLTAEIDRIAPQTNVSHVVTVRSNKYGYFNFSSAEVTYKASEDATDV 189
+ F + F +V G L ++I +NV+H V +R +G+FN+++A+VTY + V
Sbjct: 67 HSFPTNSFDIVKGLLFVHFEQIPAGSNVTHSVVIRPRAFGFFNYTAAQVTYYTDNENHHV 126
Query: 190 QYSISSAPGEGAIVAFKDYDR 252
++++ PGEG I ++YDR
Sbjct: 127 --TLTNTPGEGYIYRQREYDR 145
>UniRef50_Q5DES5 Cluster: SJCHGC05940 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC05940 protein - Schistosoma
japonicum (Blood fluke)
Length = 180
Score = 51.2 bits (117), Expect = 2e-05
Identities = 28/74 (37%), Positives = 42/74 (56%)
Frame = +1
Query: 31 FTVVGGQLTAEIDRIAPQTNVSHVVTVRSNKYGYFNFSSAEVTYKASEDATDVQYSISSA 210
FT++ G +A I +NV+HV+ ++ G+ NFSSA +TYK S D D SS+
Sbjct: 74 FTLIHGSPSARWSVIPASSNVTHVLILKPQINGFHNFSSATITYK-SNDLLDSALLYSSS 132
Query: 211 PGEGAIVAFKDYDR 252
PG I K+Y++
Sbjct: 133 PGLLTIHKLKEYNK 146
Score = 36.7 bits (81), Expect = 0.41
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = +3
Query: 252 KFSSHILDWAAFAVMTLPSLAIPFGLWY 335
+F+SH ++W FA+ P L IP+ LW+
Sbjct: 147 RFTSHTMEWIGFALFVTPCLLIPYMLWH 174
>UniRef50_Q54VI6 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 175
Score = 36.7 bits (81), Expect = 0.41
Identities = 23/87 (26%), Positives = 44/87 (50%), Gaps = 2/87 (2%)
Frame = +1
Query: 4 VDNGFHPDVFTVVGGQLTAEIDRIAPQTNVSHVVTVRSNKYGYFNFSSAEVTYKASEDAT 183
+DN F F V G + + +AP + V +TV K G ++ +S + Y+ ++ T
Sbjct: 53 IDNDFSNAEFEFVSGSSEGKWETLAPNSQVQTNLTVIPKKSGIYSLTSTVLNYRKTQ--T 110
Query: 184 DVQYSISSAPG-EGAIVAFK-DYDRNS 258
++++SSA G V + DY++ +
Sbjct: 111 SSEFTVSSAASYSGMYVESQADYEKRT 137
>UniRef50_Q0JRG3 Cluster: Os01g0102700 protein; n=9;
Magnoliophyta|Rep: Os01g0102700 protein - Oryza sativa
subsp. japonica (Rice)
Length = 205
Score = 35.5 bits (78), Expect = 0.96
Identities = 15/58 (25%), Positives = 29/58 (50%)
Frame = +1
Query: 7 DNGFHPDVFTVVGGQLTAEIDRIAPQTNVSHVVTVRSNKYGYFNFSSAEVTYKASEDA 180
D+ + + F +V G+++ ++R+ P SH + + G F S A +TY+ A
Sbjct: 65 DDTWPKEAFELVSGEMSKTLERLDPGVTASHAFVLETKVQGRFQGSPAVITYRVPTKA 122
>UniRef50_Q2UDT3 Cluster: Chitinase; n=2; Aspergillus|Rep: Chitinase
- Aspergillus oryzae
Length = 1214
Score = 35.5 bits (78), Expect = 0.96
Identities = 20/68 (29%), Positives = 34/68 (50%)
Frame = +1
Query: 1 LVDNGFHPDVFTVVGGQLTAEIDRIAPQTNVSHVVTVRSNKYGYFNFSSAEVTYKASEDA 180
+V+NG PD +G + R+ + +V + +NKY + +F+ A VT D
Sbjct: 490 IVNNGKAPDQLKTIGYFEAFDQTRVCLRMSVKEIP---ANKYSHIHFAFATVTSSFDVDI 546
Query: 181 TDVQYSIS 204
+DV+Y S
Sbjct: 547 SDVEYEFS 554
>UniRef50_A5JZ01 Cluster: Cytoadherence linked asexual protein,
CLAG, putative; n=2; Plasmodium|Rep: Cytoadherence
linked asexual protein, CLAG, putative - Plasmodium
vivax
Length = 1411
Score = 35.1 bits (77), Expect = 1.3
Identities = 12/41 (29%), Positives = 27/41 (65%)
Frame = +1
Query: 448 VYFWLNNVLITAIDFNRFKYIYGFVYKKKLLPDCRSYLFHV 570
+Y++++N+L +++F ++ IYGFV K+ + + LF +
Sbjct: 833 LYYYIHNILGNSVNFYKYGMIYGFVINKEYFKEVANELFSI 873
>UniRef50_UPI0000DD8547 Cluster: PREDICTED: similar to CEA-related
cell adhesion molecule 1; n=3; Catarrhini|Rep:
PREDICTED: similar to CEA-related cell adhesion molecule
1 - Homo sapiens
Length = 398
Score = 34.7 bits (76), Expect = 1.7
Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Frame = -2
Query: 153 FRRAE-VEIAVLIGPDSHYMGYISLRCNPIDFRGQLSAYYSKHVRMEAVVH 4
F+R+E + + V GPD Y+ LR NP DF G ++A V ME + +
Sbjct: 274 FQRSERISLTVAYGPD-----YVLLRSNPDDFNGIVTAEIGSQVEMECICY 319
>UniRef50_Q89KM4 Cluster: Bll4881 protein; n=2; Bradyrhizobium|Rep:
Bll4881 protein - Bradyrhizobium japonicum
Length = 847
Score = 34.7 bits (76), Expect = 1.7
Identities = 16/47 (34%), Positives = 28/47 (59%)
Frame = +1
Query: 82 QTNVSHVVTVRSNKYGYFNFSSAEVTYKASEDATDVQYSISSAPGEG 222
Q +VS+ V+++S+ G F+F A +Y +D Y++S +PG G
Sbjct: 406 QIHVSNAVSLKSDTKGVFDFDLAASSYNYLQDIQVSPYTVSPSPGLG 452
>UniRef50_Q7UYS3 Cluster: Putative uncharacterized protein; n=1;
Pirellula sp.|Rep: Putative uncharacterized protein -
Rhodopirellula baltica
Length = 347
Score = 34.7 bits (76), Expect = 1.7
Identities = 20/71 (28%), Positives = 31/71 (43%)
Frame = -2
Query: 255 ISIIIFEGYDGSLSWSTADRILDVCGVFAGFVCDFRRAEVEIAVLIGPDSHYMGYISLRC 76
+S++ F GYD L S D ++ +C G V ++ + + + PD
Sbjct: 40 VSVVSFHGYDDCLRLSNGDAVVTLCPAAGGRVLEYSVDGTNV-LYLDPDDAGWTLQQFEK 98
Query: 75 NPIDFRGQLSA 43
D RGQLSA
Sbjct: 99 GQTDRRGQLSA 109
>UniRef50_A3Q4D1 Cluster: AMP-dependent synthetase and ligase; n=19;
Mycobacterium|Rep: AMP-dependent synthetase and ligase -
Mycobacterium sp. (strain JLS)
Length = 592
Score = 33.9 bits (74), Expect = 2.9
Identities = 22/86 (25%), Positives = 41/86 (47%), Gaps = 3/86 (3%)
Frame = +1
Query: 13 GFHPDVFTVVGGQLTAEIDRIAPQTNVSHVVTVRSNKYG---YFNFSSAEVTYKASEDAT 183
GF DV T++GG +T R + +T++ V R+ KY + F +++Y+ + +
Sbjct: 23 GFLMDVPTILGGVVTGFGARPSAKTSIGKVFQERAAKYADKTFLRFEDRDISYREANETV 82
Query: 184 DVQYSISSAPGEGAIVAFKDYDRNSP 261
+ ++ + G G RNSP
Sbjct: 83 NRYAAVLADRGVGRGDVVAIMLRNSP 108
>UniRef50_Q4K678 Cluster: Spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein; n=4;
Pseudomonas|Rep: Spermidine/putrescine ABC transporter,
spermidine/putrescine-binding protein - Pseudomonas
fluorescens (strain Pf-5 / ATCC BAA-477)
Length = 344
Score = 33.1 bits (72), Expect = 5.1
Identities = 20/42 (47%), Positives = 24/42 (57%)
Frame = +2
Query: 251 EILLAYPRLGGIRSYDPPVPSHSIWPLVLIKEQI*EAFKTQK 376
E LLA + GG YD +PSH P +LIKEQ+ E F K
Sbjct: 60 ETLLAKLKQGGT-GYDVAIPSHQFIP-ILIKEQLLERFDPAK 99
>UniRef50_UPI00015B50D8 Cluster: PREDICTED: hypothetical protein;
n=1; Nasonia vitripennis|Rep: PREDICTED: hypothetical
protein - Nasonia vitripennis
Length = 1119
Score = 32.7 bits (71), Expect = 6.7
Identities = 19/54 (35%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Frame = +1
Query: 52 LTAEIDRIAPQTNVSHVVTVRSNKYGYFNFSSAEVTYKAS---EDATDVQYSIS 204
+T EID I+ T+V +V VRS+ G NF + ++ Y S +D+ + YS +
Sbjct: 791 VTVEIDNISANTSVQRIVYVRSHNVGDRNF-AIKIEYLRSGQKKDSKETNYSFA 843
>UniRef50_Q10N14 Cluster: RNA recognition motif family protein,
expressed; n=1; Oryza sativa (japonica
cultivar-group)|Rep: RNA recognition motif family
protein, expressed - Oryza sativa subsp. japonica (Rice)
Length = 310
Score = 32.3 bits (70), Expect = 8.9
Identities = 15/33 (45%), Positives = 19/33 (57%)
Frame = +1
Query: 91 VSHVVTVRSNKYGYFNFSSAEVTYKASEDATDV 189
+S +T RS YG+ F A+ KA EDAT V
Sbjct: 65 ISDKLTGRSKGYGFVTFKEADAAKKACEDATPV 97
>UniRef50_Q00W22 Cluster: Chromosome 14 contig 1, DNA sequence; n=1;
Ostreococcus tauri|Rep: Chromosome 14 contig 1, DNA
sequence - Ostreococcus tauri
Length = 274
Score = 32.3 bits (70), Expect = 8.9
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = +1
Query: 1 LVDNGFHPDVFTVVGGQLTAEIDRIAPQTNVSHV 102
LV GF V +V G+L + +A QTNV HV
Sbjct: 108 LVSRGFPAQVVALVHGRLRVAVQDLATQTNVQHV 141
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 582,821,273
Number of Sequences: 1657284
Number of extensions: 11147891
Number of successful extensions: 28099
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 27386
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28094
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 41902926763
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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