Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0329.Seq
         (598 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X74104-1|CAA52207.1|  183|Homo sapiens translocon-associated pro...    86   1e-16
D37991-1|BAA07206.1|  183|Homo sapiens beta-signal sequence rece...    86   1e-16
CR456973-1|CAG33254.1|  183|Homo sapiens SSR2 protein.                 86   1e-16
BC000341-1|AAH00341.2|  183|Homo sapiens signal sequence recepto...    86   1e-16
AL355388-11|CAH72631.1|  202|Homo sapiens signal sequence recept...    86   1e-16
AK222600-1|BAD96320.1|  183|Homo sapiens signal sequence recepto...    86   1e-16
BX649192-1|CAE46211.1|  143|Homo sapiens hypothetical protein pr...    69   1e-11
AL355388-12|CAH72632.1|  146|Homo sapiens signal sequence recept...    69   1e-11
U56814-1|AAB63967.1|  305|Homo sapiens DNase1-Like III protein p...    31   2.3  
BC015831-1|AAH15831.1|  305|Homo sapiens DNASE1L3 protein protein.     31   2.3  
AF047354-1|AAC35752.1|  305|Homo sapiens liver and spleen DNase ...    31   2.3  

>X74104-1|CAA52207.1|  183|Homo sapiens translocon-associated
           protein protein.
          Length = 183

 Score = 85.8 bits (203), Expect = 1e-16
 Identities = 42/84 (50%), Positives = 56/84 (66%)
 Frame = +1

Query: 1   LVDNGFHPDVFTVVGGQLTAEIDRIAPQTNVSHVVTVRSNKYGYFNFSSAEVTYKASEDA 180
           L D+ F P+ F +V G L  + DRIAP +NVSH V +R  K GYFNF+SA +TY A ED 
Sbjct: 59  LSDDSFPPEDFGIVSGMLNVKWDRIAPASNVSHTVVLRPLKAGYFNFTSATITYLAQEDG 118

Query: 181 TDVQYSISSAPGEGAIVAFKDYDR 252
             V    +SAPG+G I+A +++DR
Sbjct: 119 -PVVIGSTSAPGQGGILAQREFDR 141



 Score = 50.0 bits (114), Expect = 6e-06
 Identities = 20/28 (71%), Positives = 22/28 (78%)
 Frame = +3

Query: 252 KFSSHILDWAAFAVMTLPSLAIPFGLWY 335
           +FS H LDWAAF VMTLPS+ IP  LWY
Sbjct: 142 RFSPHFLDWAAFGVMTLPSIGIPLLLWY 169


>D37991-1|BAA07206.1|  183|Homo sapiens beta-signal sequence
           receptor protein.
          Length = 183

 Score = 85.8 bits (203), Expect = 1e-16
 Identities = 42/84 (50%), Positives = 56/84 (66%)
 Frame = +1

Query: 1   LVDNGFHPDVFTVVGGQLTAEIDRIAPQTNVSHVVTVRSNKYGYFNFSSAEVTYKASEDA 180
           L D+ F P+ F +V G L  + DRIAP +NVSH V +R  K GYFNF+SA +TY A ED 
Sbjct: 59  LSDDSFPPEDFGIVSGMLNVKWDRIAPASNVSHTVVLRPLKAGYFNFTSATITYLAQEDG 118

Query: 181 TDVQYSISSAPGEGAIVAFKDYDR 252
             V    +SAPG+G I+A +++DR
Sbjct: 119 -PVVIGSTSAPGQGGILAQREFDR 141



 Score = 50.0 bits (114), Expect = 6e-06
 Identities = 20/28 (71%), Positives = 22/28 (78%)
 Frame = +3

Query: 252 KFSSHILDWAAFAVMTLPSLAIPFGLWY 335
           +FS H LDWAAF VMTLPS+ IP  LWY
Sbjct: 142 RFSPHFLDWAAFGVMTLPSIGIPLLLWY 169


>CR456973-1|CAG33254.1|  183|Homo sapiens SSR2 protein.
          Length = 183

 Score = 85.8 bits (203), Expect = 1e-16
 Identities = 42/84 (50%), Positives = 56/84 (66%)
 Frame = +1

Query: 1   LVDNGFHPDVFTVVGGQLTAEIDRIAPQTNVSHVVTVRSNKYGYFNFSSAEVTYKASEDA 180
           L D+ F P+ F +V G L  + DRIAP +NVSH V +R  K GYFNF+SA +TY A ED 
Sbjct: 59  LSDDSFPPEDFGIVSGMLNVKWDRIAPASNVSHTVVLRPLKAGYFNFTSATITYLAQEDG 118

Query: 181 TDVQYSISSAPGEGAIVAFKDYDR 252
             V    +SAPG+G I+A +++DR
Sbjct: 119 -PVVIGSTSAPGQGGILAQREFDR 141



 Score = 50.0 bits (114), Expect = 6e-06
 Identities = 20/28 (71%), Positives = 22/28 (78%)
 Frame = +3

Query: 252 KFSSHILDWAAFAVMTLPSLAIPFGLWY 335
           +FS H LDWAAF VMTLPS+ IP  LWY
Sbjct: 142 RFSPHFLDWAAFGVMTLPSIGIPLLLWY 169


>BC000341-1|AAH00341.2|  183|Homo sapiens signal sequence receptor,
           beta (translocon-associated protein beta) protein.
          Length = 183

 Score = 85.8 bits (203), Expect = 1e-16
 Identities = 42/84 (50%), Positives = 56/84 (66%)
 Frame = +1

Query: 1   LVDNGFHPDVFTVVGGQLTAEIDRIAPQTNVSHVVTVRSNKYGYFNFSSAEVTYKASEDA 180
           L D+ F P+ F +V G L  + DRIAP +NVSH V +R  K GYFNF+SA +TY A ED 
Sbjct: 59  LSDDSFPPEDFGIVSGMLNVKWDRIAPASNVSHTVVLRPLKAGYFNFTSATITYLAQEDG 118

Query: 181 TDVQYSISSAPGEGAIVAFKDYDR 252
             V    +SAPG+G I+A +++DR
Sbjct: 119 -PVVIGSTSAPGQGGILAQREFDR 141



 Score = 50.0 bits (114), Expect = 6e-06
 Identities = 20/28 (71%), Positives = 22/28 (78%)
 Frame = +3

Query: 252 KFSSHILDWAAFAVMTLPSLAIPFGLWY 335
           +FS H LDWAAF VMTLPS+ IP  LWY
Sbjct: 142 RFSPHFLDWAAFGVMTLPSIGIPLLLWY 169


>AL355388-11|CAH72631.1|  202|Homo sapiens signal sequence receptor,
           beta (translocon-associated protein beta) protein.
          Length = 202

 Score = 85.8 bits (203), Expect = 1e-16
 Identities = 42/84 (50%), Positives = 56/84 (66%)
 Frame = +1

Query: 1   LVDNGFHPDVFTVVGGQLTAEIDRIAPQTNVSHVVTVRSNKYGYFNFSSAEVTYKASEDA 180
           L D+ F P+ F +V G L  + DRIAP +NVSH V +R  K GYFNF+SA +TY A ED 
Sbjct: 78  LSDDSFPPEDFGIVSGMLNVKWDRIAPASNVSHTVVLRPLKAGYFNFTSATITYLAQEDG 137

Query: 181 TDVQYSISSAPGEGAIVAFKDYDR 252
             V    +SAPG+G I+A +++DR
Sbjct: 138 -PVVIGSTSAPGQGGILAQREFDR 160



 Score = 50.0 bits (114), Expect = 6e-06
 Identities = 20/28 (71%), Positives = 22/28 (78%)
 Frame = +3

Query: 252 KFSSHILDWAAFAVMTLPSLAIPFGLWY 335
           +FS H LDWAAF VMTLPS+ IP  LWY
Sbjct: 161 RFSPHFLDWAAFGVMTLPSIGIPLLLWY 188


>AK222600-1|BAD96320.1|  183|Homo sapiens signal sequence receptor,
           beta precursor variant protein.
          Length = 183

 Score = 85.8 bits (203), Expect = 1e-16
 Identities = 42/84 (50%), Positives = 56/84 (66%)
 Frame = +1

Query: 1   LVDNGFHPDVFTVVGGQLTAEIDRIAPQTNVSHVVTVRSNKYGYFNFSSAEVTYKASEDA 180
           L D+ F P+ F +V G L  + DRIAP +NVSH V +R  K GYFNF+SA +TY A ED 
Sbjct: 59  LSDDSFPPEDFGIVSGMLNVKWDRIAPASNVSHTVVLRPLKAGYFNFTSATITYLAQEDG 118

Query: 181 TDVQYSISSAPGEGAIVAFKDYDR 252
             V    +SAPG+G I+A +++DR
Sbjct: 119 -PVVIGSTSAPGQGGILAQREFDR 141



 Score = 50.0 bits (114), Expect = 6e-06
 Identities = 20/28 (71%), Positives = 22/28 (78%)
 Frame = +3

Query: 252 KFSSHILDWAAFAVMTLPSLAIPFGLWY 335
           +FS H LDWAAF VMTLPS+ IP  LWY
Sbjct: 142 RFSPHFLDWAAFGVMTLPSIGIPLLLWY 169


>BX649192-1|CAE46211.1|  143|Homo sapiens hypothetical protein
           protein.
          Length = 143

 Score = 69.3 bits (162), Expect = 1e-11
 Identities = 32/59 (54%), Positives = 40/59 (67%)
 Frame = +1

Query: 1   LVDNGFHPDVFTVVGGQLTAEIDRIAPQTNVSHVVTVRSNKYGYFNFSSAEVTYKASED 177
           L D+ F P+ F +V G L  + DRIAP +NVSH V +R  K GYFNF+SA +TY A ED
Sbjct: 80  LSDDSFPPEDFGIVSGMLNVKWDRIAPASNVSHTVVLRPLKAGYFNFTSATITYLAQED 138


>AL355388-12|CAH72632.1|  146|Homo sapiens signal sequence receptor,
           beta (translocon-associated protein beta) protein.
          Length = 146

 Score = 69.3 bits (162), Expect = 1e-11
 Identities = 32/59 (54%), Positives = 40/59 (67%)
 Frame = +1

Query: 1   LVDNGFHPDVFTVVGGQLTAEIDRIAPQTNVSHVVTVRSNKYGYFNFSSAEVTYKASED 177
           L D+ F P+ F +V G L  + DRIAP +NVSH V +R  K GYFNF+SA +TY A ED
Sbjct: 78  LSDDSFPPEDFGIVSGMLNVKWDRIAPASNVSHTVVLRPLKAGYFNFTSATITYLAQED 136


>U56814-1|AAB63967.1|  305|Homo sapiens DNase1-Like III protein
           protein.
          Length = 305

 Score = 31.5 bits (68), Expect = 2.3
 Identities = 14/35 (40%), Positives = 22/35 (62%)
 Frame = +1

Query: 463 NNVLITAIDFNRFKYIYGFVYKKKLLPDCRSYLFH 567
           N V+ + +  N +K  Y F+YK+KL+   RSY +H
Sbjct: 86  NYVISSRLGRNTYKEQYAFLYKEKLVSVKRSYHYH 120


>BC015831-1|AAH15831.1|  305|Homo sapiens DNASE1L3 protein protein.
          Length = 305

 Score = 31.5 bits (68), Expect = 2.3
 Identities = 14/35 (40%), Positives = 22/35 (62%)
 Frame = +1

Query: 463 NNVLITAIDFNRFKYIYGFVYKKKLLPDCRSYLFH 567
           N V+ + +  N +K  Y F+YK+KL+   RSY +H
Sbjct: 86  NYVISSRLGRNTYKEQYAFLYKEKLVSVKRSYHYH 120


>AF047354-1|AAC35752.1|  305|Homo sapiens liver and spleen DNase
           precursor protein.
          Length = 305

 Score = 31.5 bits (68), Expect = 2.3
 Identities = 14/35 (40%), Positives = 22/35 (62%)
 Frame = +1

Query: 463 NNVLITAIDFNRFKYIYGFVYKKKLLPDCRSYLFH 567
           N V+ + +  N +K  Y F+YK+KL+   RSY +H
Sbjct: 86  NYVISSRLGRNTYKEQYAFLYKEKLVSVKRSYHYH 120


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,405,172
Number of Sequences: 237096
Number of extensions: 1690347
Number of successful extensions: 2978
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 2844
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2972
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6324506272
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)