Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0329.Seq
         (598 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF160923-1|AAD46863.1|  190|Drosophila melanogaster BcDNA.LD1045...   113   2e-25
AE014296-2644|AAF49532.2|  190|Drosophila melanogaster CG5474-PA...   113   2e-25
AY095062-1|AAM11390.1|  512|Drosophila melanogaster RE01809p pro...    30   2.7  
AE014134-207|AAF51413.1|  512|Drosophila melanogaster CG4726-PA ...    30   2.7  
AY122264-1|AAM52776.1|  311|Drosophila melanogaster SD14666p pro...    28   8.4  
AE014296-2771|AAF49436.1|  307|Drosophila melanogaster CG4098-PA...    28   8.4  

>AF160923-1|AAD46863.1|  190|Drosophila melanogaster BcDNA.LD10457
           protein.
          Length = 190

 Score =  113 bits (271), Expect = 2e-25
 Identities = 49/84 (58%), Positives = 66/84 (78%)
 Frame = +1

Query: 1   LVDNGFHPDVFTVVGGQLTAEIDRIAPQTNVSHVVTVRSNKYGYFNFSSAEVTYKASEDA 180
           LVD+GFHP+ F VVGGQ TA +DRIAPQTN +HV+ VR   +GYFNF++AEV+YKA E++
Sbjct: 64  LVDSGFHPEAFDVVGGQPTAVVDRIAPQTNFTHVLVVRPKAFGYFNFTAAEVSYKAVEES 123

Query: 181 TDVQYSISSAPGEGAIVAFKDYDR 252
             +Q ++SS PGEG IV   +Y++
Sbjct: 124 ETLQLAVSSEPGEGGIVNLNEYNK 147



 Score = 52.4 bits (120), Expect = 4e-07
 Identities = 21/28 (75%), Positives = 23/28 (82%)
 Frame = +3

Query: 252 KFSSHILDWAAFAVMTLPSLAIPFGLWY 335
           +FSSH  DW AFAVMTLPSLAIP  LW+
Sbjct: 148 RFSSHFFDWVAFAVMTLPSLAIPLALWH 175


>AE014296-2644|AAF49532.2|  190|Drosophila melanogaster CG5474-PA
           protein.
          Length = 190

 Score =  113 bits (271), Expect = 2e-25
 Identities = 49/84 (58%), Positives = 66/84 (78%)
 Frame = +1

Query: 1   LVDNGFHPDVFTVVGGQLTAEIDRIAPQTNVSHVVTVRSNKYGYFNFSSAEVTYKASEDA 180
           LVD+GFHP+ F VVGGQ TA +DRIAPQTN +HV+ VR   +GYFNF++AEV+YKA E++
Sbjct: 64  LVDSGFHPEAFDVVGGQPTAVVDRIAPQTNFTHVLVVRPKAFGYFNFTAAEVSYKAVEES 123

Query: 181 TDVQYSISSAPGEGAIVAFKDYDR 252
             +Q ++SS PGEG IV   +Y++
Sbjct: 124 ETLQLAVSSEPGEGGIVNLNEYNK 147



 Score = 52.4 bits (120), Expect = 4e-07
 Identities = 21/28 (75%), Positives = 23/28 (82%)
 Frame = +3

Query: 252 KFSSHILDWAAFAVMTLPSLAIPFGLWY 335
           +FSSH  DW AFAVMTLPSLAIP  LW+
Sbjct: 148 RFSSHFFDWVAFAVMTLPSLAIPLALWH 175


>AY095062-1|AAM11390.1|  512|Drosophila melanogaster RE01809p
           protein.
          Length = 512

 Score = 29.9 bits (64), Expect = 2.7
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = -2

Query: 426 QHRPN*LHYNKNLTSVPFWVLKASHICS 343
           +H P  + + K  TSVPFW +  +H CS
Sbjct: 276 EHHPA-VPWGKVFTSVPFWAILIAHTCS 302


>AE014134-207|AAF51413.1|  512|Drosophila melanogaster CG4726-PA
           protein.
          Length = 512

 Score = 29.9 bits (64), Expect = 2.7
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = -2

Query: 426 QHRPN*LHYNKNLTSVPFWVLKASHICS 343
           +H P  + + K  TSVPFW +  +H CS
Sbjct: 276 EHHPA-VPWGKVFTSVPFWAILIAHTCS 302


>AY122264-1|AAM52776.1|  311|Drosophila melanogaster SD14666p
           protein.
          Length = 311

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = +2

Query: 269 PRLGGIRSYDPPVPSHSIWP 328
           P +GG    DPP+PS + WP
Sbjct: 83  PHIGGQVWADPPLPSDTFWP 102


>AE014296-2771|AAF49436.1|  307|Drosophila melanogaster CG4098-PA
           protein.
          Length = 307

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = +2

Query: 269 PRLGGIRSYDPPVPSHSIWP 328
           P +GG    DPP+PS + WP
Sbjct: 79  PHIGGQVWADPPLPSDTFWP 98


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,889,299
Number of Sequences: 53049
Number of extensions: 504440
Number of successful extensions: 1066
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1053
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1066
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2420893683
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)