Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0329.Seq
         (598 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U41274-1|AAA82458.1|  188|Caenorhabditis elegans Hypothetical pr...    58   4e-09
Z68316-11|CAO82045.1| 1242|Caenorhabditis elegans Hypothetical p...    27   7.7  
Z68316-10|CAO82044.1| 1289|Caenorhabditis elegans Hypothetical p...    27   7.7  
Z68316-9|CAA92684.2| 1291|Caenorhabditis elegans Hypothetical pr...    27   7.7  
Z68297-10|CAO82029.1| 1242|Caenorhabditis elegans Hypothetical p...    27   7.7  
Z68297-9|CAO82028.1| 1289|Caenorhabditis elegans Hypothetical pr...    27   7.7  
Z68297-8|CAA92596.2| 1291|Caenorhabditis elegans Hypothetical pr...    27   7.7  
DQ140399-1|AAZ73761.1| 1291|Caenorhabditis elegans lin-48 expres...    27   7.7  

>U41274-1|AAA82458.1|  188|Caenorhabditis elegans Hypothetical
           protein T04G9.5 protein.
          Length = 188

 Score = 58.4 bits (135), Expect = 4e-09
 Identities = 27/81 (33%), Positives = 48/81 (59%)
 Frame = +1

Query: 10  NGFHPDVFTVVGGQLTAEIDRIAPQTNVSHVVTVRSNKYGYFNFSSAEVTYKASEDATDV 189
           + F  + F +V G L    ++I   +NV+H V +R   +G+FN+++A+VTY    +   V
Sbjct: 67  HSFPTNSFDIVKGLLFVHFEQIPAGSNVTHSVVIRPRAFGFFNYTAAQVTYYTDNENHHV 126

Query: 190 QYSISSAPGEGAIVAFKDYDR 252
             ++++ PGEG I   ++YDR
Sbjct: 127 --TLTNTPGEGYIYRQREYDR 145


>Z68316-11|CAO82045.1| 1242|Caenorhabditis elegans Hypothetical
           protein F11A10.1c protein.
          Length = 1242

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = -2

Query: 318 EWLGTGGS*LRMPPNRGYARRISIIIFEGYDG 223
           +W+G     LR+  ++ YA R SII F+  DG
Sbjct: 469 KWVGESERQLRLLFDQAYAMRPSIIFFDEIDG 500


>Z68316-10|CAO82044.1| 1289|Caenorhabditis elegans Hypothetical
           protein F11A10.1b protein.
          Length = 1289

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = -2

Query: 318 EWLGTGGS*LRMPPNRGYARRISIIIFEGYDG 223
           +W+G     LR+  ++ YA R SII F+  DG
Sbjct: 467 KWVGESERQLRLLFDQAYAMRPSIIFFDEIDG 498


>Z68316-9|CAA92684.2| 1291|Caenorhabditis elegans Hypothetical
           protein F11A10.1a protein.
          Length = 1291

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = -2

Query: 318 EWLGTGGS*LRMPPNRGYARRISIIIFEGYDG 223
           +W+G     LR+  ++ YA R SII F+  DG
Sbjct: 469 KWVGESERQLRLLFDQAYAMRPSIIFFDEIDG 500


>Z68297-10|CAO82029.1| 1242|Caenorhabditis elegans Hypothetical
           protein F11A10.1c protein.
          Length = 1242

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = -2

Query: 318 EWLGTGGS*LRMPPNRGYARRISIIIFEGYDG 223
           +W+G     LR+  ++ YA R SII F+  DG
Sbjct: 469 KWVGESERQLRLLFDQAYAMRPSIIFFDEIDG 500


>Z68297-9|CAO82028.1| 1289|Caenorhabditis elegans Hypothetical
           protein F11A10.1b protein.
          Length = 1289

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = -2

Query: 318 EWLGTGGS*LRMPPNRGYARRISIIIFEGYDG 223
           +W+G     LR+  ++ YA R SII F+  DG
Sbjct: 467 KWVGESERQLRLLFDQAYAMRPSIIFFDEIDG 498


>Z68297-8|CAA92596.2| 1291|Caenorhabditis elegans Hypothetical
           protein F11A10.1a protein.
          Length = 1291

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = -2

Query: 318 EWLGTGGS*LRMPPNRGYARRISIIIFEGYDG 223
           +W+G     LR+  ++ YA R SII F+  DG
Sbjct: 469 KWVGESERQLRLLFDQAYAMRPSIIFFDEIDG 500


>DQ140399-1|AAZ73761.1| 1291|Caenorhabditis elegans lin-48
           expression abnormal protein protein.
          Length = 1291

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = -2

Query: 318 EWLGTGGS*LRMPPNRGYARRISIIIFEGYDG 223
           +W+G     LR+  ++ YA R SII F+  DG
Sbjct: 469 KWVGESERQLRLLFDQAYAMRPSIIFFDEIDG 500


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,420,726
Number of Sequences: 27780
Number of extensions: 263888
Number of successful extensions: 658
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 631
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 657
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1268802960
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)