Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0327.Seq
(421 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P49630 Cluster: 60S ribosomal protein L36 (Protein minu... 94 9e-19
UniRef50_Q9Y3U8 Cluster: 60S ribosomal protein L36; n=47; Eutele... 76 3e-13
UniRef50_Q1G198 Cluster: 60S ribosomal protein L36; n=1; Leptino... 71 1e-11
UniRef50_UPI00005A004D Cluster: PREDICTED: similar to ribosomal ... 63 3e-09
UniRef50_A7ATP0 Cluster: 60S ribosomal protein L36; n=3; Piropla... 62 3e-09
UniRef50_P49181 Cluster: 60S ribosomal protein L36; n=18; Fungi/... 62 4e-09
UniRef50_Q9BYF3 Cluster: 60S ribosomal protein L36; n=5; Amniota... 60 2e-08
UniRef50_UPI0000EBDDF6 Cluster: PREDICTED: similar to rat riboso... 58 5e-08
UniRef50_O80929 Cluster: 60S ribosomal protein L36-1; n=18; Euka... 57 1e-07
UniRef50_A2ZZF6 Cluster: 60S ribosomal protein L36; n=9; Eukaryo... 55 7e-07
UniRef50_Q7XY66 Cluster: Putative 60S ribosomal protein L36; n=1... 54 9e-07
UniRef50_UPI0000604754 Cluster: PREDICTED: similar to rat riboso... 52 5e-06
UniRef50_P52866 Cluster: 60S ribosomal protein L36; n=13; Eukary... 52 5e-06
UniRef50_Q5KEE1 Cluster: 60S ribosomal protein L36; n=2; Dikarya... 51 8e-06
UniRef50_Q92365 Cluster: 60S ribosomal protein L36-A; n=2; Schiz... 51 1e-05
UniRef50_A1BQ89 Cluster: 60S ribosomal protein L36; n=1; Strongy... 50 1e-05
UniRef50_Q8S8Z4 Cluster: 60S ribosomal protein L36 homolog; n=1;... 47 2e-04
UniRef50_A0DT55 Cluster: 60S ribosomal protein L36; n=5; Oligohy... 45 5e-04
UniRef50_Q8I713 Cluster: 60S Ribosomal protein L36, putative; n=... 44 0.001
UniRef50_Q7R9S3 Cluster: 60S ribosomal protein L36; n=2; Plasmod... 44 0.001
UniRef50_Q16KP4 Cluster: 60S ribosomal protein L36; n=1; Aedes a... 44 0.001
UniRef50_P05745 Cluster: 60S ribosomal protein L36-A; n=26; Fung... 44 0.001
UniRef50_UPI00015538C3 Cluster: PREDICTED: similar to 60S riboso... 43 0.003
UniRef50_Q38CY6 Cluster: 60S ribosomal protein L36; n=2; Trypano... 40 0.016
UniRef50_Q4QCE1 Cluster: 60S ribosomal protein l36, putative; n=... 38 0.083
UniRef50_Q55AQ9 Cluster: 60S ribosomal protein L36; n=2; Dictyos... 36 0.25
UniRef50_Q7QRE6 Cluster: 60S ribosomal protein L36; n=1; Giardia... 36 0.44
UniRef50_UPI0000DB6F2C Cluster: PREDICTED: similar to Myosin hea... 35 0.77
UniRef50_A7TBW5 Cluster: Predicted protein; n=1; Nematostella ve... 35 0.77
UniRef50_A2F3E0 Cluster: Ribosomal protein L36e, putative; n=4; ... 33 3.1
UniRef50_Q2L2W5 Cluster: Phage protein; n=1; Bordetella avium 19... 31 9.5
UniRef50_Q0KIB0 Cluster: CG34113-PO, isoform O; n=6; Diptera|Rep... 31 9.5
>UniRef50_P49630 Cluster: 60S ribosomal protein L36 (Protein
minute(1)1B); n=18; Coelomata|Rep: 60S ribosomal protein
L36 (Protein minute(1)1B) - Drosophila melanogaster
(Fruit fly)
Length = 115
Score = 94.3 bits (224), Expect = 9e-19
Identities = 47/76 (61%), Positives = 59/76 (77%), Gaps = 1/76 (1%)
Frame = +3
Query: 39 MAPRFEIAVGLRKGHKTTKISAGRKGITDKAIR-IRPARLKGLQTKHSKFVRDLVREVVG 215
MA R+E+A+GL KGHKT+KI K DK ++ +R +RLK +QT+H+KF+RDLVREVVG
Sbjct: 1 MAVRYELAIGLNKGHKTSKIR-NVKYTGDKKVKGLRGSRLKNIQTRHTKFMRDLVREVVG 59
Query: 216 HAQYEKRAMELLKCQK 263
HA YEKR MELLK K
Sbjct: 60 HAPYEKRTMELLKVSK 75
Score = 74.5 bits (175), Expect = 8e-13
Identities = 35/38 (92%), Positives = 37/38 (97%)
Frame = +2
Query: 254 VSKDKRALKFLKRRLGTHIRAKRKREELSNVLAQMRKA 367
VSKDKRALKFLKRRLGTHIRAKRKREELSN+L Q+RKA
Sbjct: 73 VSKDKRALKFLKRRLGTHIRAKRKREELSNILTQLRKA 110
>UniRef50_Q9Y3U8 Cluster: 60S ribosomal protein L36; n=47;
Euteleostomi|Rep: 60S ribosomal protein L36 - Homo
sapiens (Human)
Length = 105
Score = 76.2 bits (179), Expect = 3e-13
Identities = 36/41 (87%), Positives = 40/41 (97%)
Frame = +2
Query: 254 VSKDKRALKFLKRRLGTHIRAKRKREELSNVLAQMRKAAAR 376
VSKDKRALKF+K+R+GTHIRAKRKREELSNVLA MRKAAA+
Sbjct: 63 VSKDKRALKFIKKRVGTHIRAKRKREELSNVLAAMRKAAAK 103
Score = 70.9 bits (166), Expect = 1e-11
Identities = 39/75 (52%), Positives = 48/75 (64%)
Frame = +3
Query: 39 MAPRFEIAVGLRKGHKTTKISAGRKGITDKAIRIRPARLKGLQTKHSKFVRDLVREVVGH 218
MA R+ +AVGL KGHK TK + R +R +G TKH+KFVRD++REV G
Sbjct: 1 MALRYPMAVGLNKGHKVTK----------NVSKPRHSRRRGRLTKHTKFVRDMIREVCGF 50
Query: 219 AQYEKRAMELLKCQK 263
A YE+RAMELLK K
Sbjct: 51 APYERRAMELLKVSK 65
>UniRef50_Q1G198 Cluster: 60S ribosomal protein L36; n=1;
Leptinotarsa decemlineata|Rep: 60S ribosomal protein L36
- Leptinotarsa decemlineata (Colorado potato beetle)
Length = 84
Score = 70.5 bits (165), Expect = 1e-11
Identities = 34/39 (87%), Positives = 35/39 (89%)
Frame = +2
Query: 254 VSKDKRALKFLKRRLGTHIRAKRKREELSNVLAQMRKAA 370
V KDKRALKFLKRRLGTHIRAKRKREELSN+L QM K A
Sbjct: 43 VXKDKRALKFLKRRLGTHIRAKRKREELSNILTQMGKQA 81
Score = 64.9 bits (151), Expect = 6e-10
Identities = 29/43 (67%), Positives = 33/43 (76%)
Frame = +3
Query: 135 RIRPARLKGLQTKHSKFVRDLVREVVGHAQYEKRAMELLKCQK 263
R P RLKG+QTKH+KFVRD++REVVGH EKR ELLK K
Sbjct: 3 RFEPERLKGIQTKHTKFVRDIIREVVGHXPXEKRXXELLKVXK 45
>UniRef50_UPI00005A004D Cluster: PREDICTED: similar to ribosomal
protein L36; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to ribosomal protein L36 - Canis familiaris
Length = 107
Score = 62.9 bits (146), Expect = 3e-09
Identities = 28/41 (68%), Positives = 36/41 (87%)
Frame = +2
Query: 254 VSKDKRALKFLKRRLGTHIRAKRKREELSNVLAQMRKAAAR 376
VSKDKR L+ +K+R+GTH+RAKR+ EELSNVLA +RKAA +
Sbjct: 65 VSKDKRTLRLIKKRVGTHVRAKRETEELSNVLAAIRKAAPK 105
>UniRef50_A7ATP0 Cluster: 60S ribosomal protein L36; n=3;
Piroplasmida|Rep: 60S ribosomal protein L36 - Babesia
bovis
Length = 116
Score = 62.5 bits (145), Expect = 3e-09
Identities = 35/81 (43%), Positives = 48/81 (59%)
Frame = +3
Query: 27 QSEIMAPRFEIAVGLRKGHKTTKISAGRKGITDKAIRIRPARLKGLQTKHSKFVRDLVRE 206
+ +I APR IAVGL KGH TT I + +RP+R KGL+TK + V +++RE
Sbjct: 6 EMKIEAPRSGIAVGLNKGHITTPIPLVKS--------VRPSRKKGLKTKRNALVSEVIRE 57
Query: 207 VVGHAQYEKRAMELLKCQKTS 269
V G A YE+ +EL+K S
Sbjct: 58 VCGFAPYERHMIELIKTGSAS 78
Score = 41.1 bits (92), Expect = 0.009
Identities = 21/39 (53%), Positives = 25/39 (64%)
Frame = +2
Query: 257 SKDKRALKFLKRRLGTHIRAKRKREELSNVLAQMRKAAA 373
S KRALKF K+RLGT RAK K +E+ V+ RK A
Sbjct: 78 SAQKRALKFAKKRLGTLRRAKTKNDEMMRVVELQRKRKA 116
>UniRef50_P49181 Cluster: 60S ribosomal protein L36; n=18;
Fungi/Metazoa group|Rep: 60S ribosomal protein L36 -
Caenorhabditis elegans
Length = 104
Score = 62.1 bits (144), Expect = 4e-09
Identities = 29/38 (76%), Positives = 32/38 (84%)
Frame = +2
Query: 254 VSKDKRALKFLKRRLGTHIRAKRKREELSNVLAQMRKA 367
+SKDKRALKFLKRR+GTH RAK KREEL NV+ RKA
Sbjct: 65 ISKDKRALKFLKRRIGTHRRAKGKREELQNVIIAQRKA 102
Score = 53.2 bits (122), Expect = 2e-06
Identities = 28/69 (40%), Positives = 42/69 (60%)
Frame = +3
Query: 57 IAVGLRKGHKTTKISAGRKGITDKAIRIRPARLKGLQTKHSKFVRDLVREVVGHAQYEKR 236
+AVGL KGH T++ ++ R R KG+ +K +K VR+LVRE+ G A YE+R
Sbjct: 9 LAVGLNKGHAATQLP----------VKQRQNRHKGVASKKTKIVRELVREITGFAPYERR 58
Query: 237 AMELLKCQK 263
+E+L+ K
Sbjct: 59 VLEMLRISK 67
>UniRef50_Q9BYF3 Cluster: 60S ribosomal protein L36; n=5;
Amniota|Rep: 60S ribosomal protein L36 - Homo sapiens
(Human)
Length = 32
Score = 60.1 bits (139), Expect = 2e-08
Identities = 27/30 (90%), Positives = 30/30 (100%)
Frame = +2
Query: 254 VSKDKRALKFLKRRLGTHIRAKRKREELSN 343
VSKDKRALKF+K+R+GTHIRAKRKREELSN
Sbjct: 3 VSKDKRALKFIKKRVGTHIRAKRKREELSN 32
>UniRef50_UPI0000EBDDF6 Cluster: PREDICTED: similar to rat ribosomal
protein L36; n=1; Bos taurus|Rep: PREDICTED: similar to
rat ribosomal protein L36 - Bos taurus
Length = 131
Score = 58.4 bits (135), Expect = 5e-08
Identities = 28/41 (68%), Positives = 34/41 (82%)
Frame = +2
Query: 254 VSKDKRALKFLKRRLGTHIRAKRKREELSNVLAQMRKAAAR 376
VSKDK+ALKF+++ LGTHI AKRK ELSNVLA R+A A+
Sbjct: 69 VSKDKQALKFIQKMLGTHICAKRKARELSNVLATTREAVAK 109
>UniRef50_O80929 Cluster: 60S ribosomal protein L36-1; n=18;
Eukaryota|Rep: 60S ribosomal protein L36-1 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 113
Score = 57.2 bits (132), Expect = 1e-07
Identities = 27/36 (75%), Positives = 31/36 (86%)
Frame = +2
Query: 254 VSKDKRALKFLKRRLGTHIRAKRKREELSNVLAQMR 361
V KDKRALK KR+LGTH RAKRKREE+S+VL +MR
Sbjct: 66 VGKDKRALKVAKRKLGTHKRAKRKREEMSSVLRKMR 101
Score = 47.6 bits (108), Expect = 1e-04
Identities = 29/67 (43%), Positives = 36/67 (53%)
Frame = +3
Query: 63 VGLRKGHKTTKISAGRKGITDKAIRIRPARLKGLQTKHSKFVRDLVREVVGHAQYEKRAM 242
VGL KGH T+ + + RP KG +K + F+R L+REV G A YEKR
Sbjct: 12 VGLNKGHVVTR----------RELAPRPNSRKGKTSKRTIFIRKLIREVAGMAPYEKRIT 61
Query: 243 ELLKCQK 263
ELLK K
Sbjct: 62 ELLKVGK 68
>UniRef50_A2ZZF6 Cluster: 60S ribosomal protein L36; n=9;
Eukaryota|Rep: 60S ribosomal protein L36 - Oryza sativa
subsp. japonica (Rice)
Length = 143
Score = 54.8 bits (126), Expect = 7e-07
Identities = 33/73 (45%), Positives = 40/73 (54%)
Frame = +3
Query: 45 PRFEIAVGLRKGHKTTKISAGRKGITDKAIRIRPARLKGLQTKHSKFVRDLVREVVGHAQ 224
P+ + VG+ KGH TK + + RP+ KG TK FVR L+REVVG A
Sbjct: 6 PKSGLFVGINKGHVVTK----------RELPPRPSDRKGKSTKRVNFVRGLIREVVGFAP 55
Query: 225 YEKRAMELLKCQK 263
YEKR ELLK K
Sbjct: 56 YEKRITELLKVGK 68
Score = 53.6 bits (123), Expect = 2e-06
Identities = 24/36 (66%), Positives = 30/36 (83%)
Frame = +2
Query: 254 VSKDKRALKFLKRRLGTHIRAKRKREELSNVLAQMR 361
V KDKRALK KR+LGTH RAK+KREE++ V+ +MR
Sbjct: 66 VGKDKRALKVAKRKLGTHKRAKKKREEMAGVIRKMR 101
>UniRef50_Q7XY66 Cluster: Putative 60S ribosomal protein L36; n=1;
Griffithsia japonica|Rep: Putative 60S ribosomal protein
L36 - Griffithsia japonica (Red alga)
Length = 94
Score = 54.4 bits (125), Expect = 9e-07
Identities = 23/36 (63%), Positives = 29/36 (80%)
Frame = +2
Query: 254 VSKDKRALKFLKRRLGTHIRAKRKREELSNVLAQMR 361
+ KDKRALKF K+RLGTH+RAKRKRE+++ L R
Sbjct: 58 IGKDKRALKFAKKRLGTHLRAKRKREQMAEALRSKR 93
Score = 33.1 bits (72), Expect = 2.4
Identities = 15/33 (45%), Positives = 21/33 (63%)
Frame = +3
Query: 165 QTKHSKFVRDLVREVVGHAQYEKRAMELLKCQK 263
Q+ + VR ++ EV G A YEKR +ELL+ K
Sbjct: 28 QSPRLQVVRSVINEVCGFAPYEKRVIELLRIGK 60
>UniRef50_UPI0000604754 Cluster: PREDICTED: similar to rat ribosomal
protein L36; n=8; Eutheria|Rep: PREDICTED: similar to
rat ribosomal protein L36 - Mus musculus
Length = 105
Score = 52.0 bits (119), Expect = 5e-06
Identities = 25/41 (60%), Positives = 30/41 (73%)
Frame = +2
Query: 254 VSKDKRALKFLKRRLGTHIRAKRKREELSNVLAQMRKAAAR 376
VS DK A KF+K+R+G HI KRK EELS V+A MRKA +
Sbjct: 63 VSNDKCAFKFIKKRVGMHIHTKRKWEELSIVIAAMRKAVPK 103
Score = 35.5 bits (78), Expect = 0.44
Identities = 25/64 (39%), Positives = 34/64 (53%)
Frame = +3
Query: 39 MAPRFEIAVGLRKGHKTTKISAGRKGITDKAIRIRPARLKGLQTKHSKFVRDLVREVVGH 218
MA +A+GL KGHK K + K + P RL TKH+KFV+D++REV
Sbjct: 1 MALHCPMAMGLDKGHKVMKNISKPKHSS-------PHRLL---TKHTKFVQDMIREVCDF 50
Query: 219 AQYE 230
Y+
Sbjct: 51 MSYD 54
>UniRef50_P52866 Cluster: 60S ribosomal protein L36; n=13;
Eukaryota|Rep: 60S ribosomal protein L36 - Daucus carota
(Carrot)
Length = 106
Score = 52.0 bits (119), Expect = 5e-06
Identities = 32/73 (43%), Positives = 39/73 (53%)
Frame = +3
Query: 45 PRFEIAVGLRKGHKTTKISAGRKGITDKAIRIRPARLKGLQTKHSKFVRDLVREVVGHAQ 224
P + VGL KGH TK K + RP+ KG +K + FVR+L+REV G
Sbjct: 6 PNTGLFVGLNKGHIVTK----------KELAPRPSDRKGKTSKRTHFVRNLIREVAGFXP 55
Query: 225 YEKRAMELLKCQK 263
YEKR ELLK K
Sbjct: 56 YEKRITELLKVGK 68
>UniRef50_Q5KEE1 Cluster: 60S ribosomal protein L36; n=2;
Dikarya|Rep: 60S ribosomal protein L36 - Cryptococcus
neoformans (Filobasidiella neoformans)
Length = 197
Score = 51.2 bits (117), Expect = 8e-06
Identities = 31/78 (39%), Positives = 40/78 (51%)
Frame = +3
Query: 30 SEIMAPRFEIAVGLRKGHKTTKISAGRKGITDKAIRIRPARLKGLQTKHSKFVRDLVREV 209
S A R + G+ KG TT I RP+ KGL+T+ FVR ++REV
Sbjct: 93 SSAPAQRSNLRYGMNKGRPTTVIPK----------TARPSNKKGLKTEKKTFVRSVIREV 142
Query: 210 VGHAQYEKRAMELLKCQK 263
G + YEKR MELL+ K
Sbjct: 143 AGFSPYEKRVMELLRNSK 160
Score = 47.2 bits (107), Expect = 1e-04
Identities = 22/37 (59%), Positives = 29/37 (78%)
Frame = +2
Query: 257 SKDKRALKFLKRRLGTHIRAKRKREELSNVLAQMRKA 367
SKDK+A K K+RLGT +R+KRK EELS V+ + R+A
Sbjct: 159 SKDKKAKKLTKKRLGTLLRSKRKIEELSAVIVEQRRA 195
>UniRef50_Q92365 Cluster: 60S ribosomal protein L36-A; n=2;
Schizosaccharomyces pombe|Rep: 60S ribosomal protein
L36-A - Schizosaccharomyces pombe (Fission yeast)
Length = 99
Score = 50.8 bits (116), Expect = 1e-05
Identities = 23/48 (47%), Positives = 33/48 (68%)
Frame = +3
Query: 111 KGITDKAIRIRPARLKGLQTKHSKFVRDLVREVVGHAQYEKRAMELLK 254
K +T + + RP+R KG +K + FVR +VREV G A YE+R MEL++
Sbjct: 13 KVLTKRQLPERPSRRKGQLSKRTSFVRSIVREVAGFAPYERRVMELIR 60
Score = 39.9 bits (89), Expect = 0.021
Identities = 21/37 (56%), Positives = 26/37 (70%)
Frame = +2
Query: 257 SKDKRALKFLKRRLGTHIRAKRKREELSNVLAQMRKA 367
S+DKRA K K+RLGT RAK K EEL++V+ R A
Sbjct: 62 SQDKRARKLAKKRLGTLKRAKGKIEELTSVIQSSRLA 98
>UniRef50_A1BQ89 Cluster: 60S ribosomal protein L36; n=1;
Strongyloides ratti|Rep: 60S ribosomal protein L36 -
Strongyloides ratti
Length = 91
Score = 50.4 bits (115), Expect = 1e-05
Identities = 29/65 (44%), Positives = 39/65 (60%)
Frame = +3
Query: 57 IAVGLRKGHKTTKISAGRKGITDKAIRIRPARLKGLQTKHSKFVRDLVREVVGHAQYEKR 236
+A+GL KG + TK A ++R R +G TK +K VR+LVRE+ G A YE+R
Sbjct: 10 LAIGLEKGVRVTK----------NARKMRQNRKRGAATKKTKVVRELVREITGFAPYERR 59
Query: 237 AMELL 251
MELL
Sbjct: 60 MMELL 64
>UniRef50_Q8S8Z4 Cluster: 60S ribosomal protein L36 homolog; n=1;
Allium cepa|Rep: 60S ribosomal protein L36 homolog -
Allium cepa (Onion)
Length = 64
Score = 46.8 bits (106), Expect = 2e-04
Identities = 23/38 (60%), Positives = 29/38 (76%)
Frame = +2
Query: 254 VSKDKRALKFLKRRLGTHIRAKRKREELSNVLAQMRKA 367
V+K + L+ R+LGTH RAKRKREE+SNVL +MR A
Sbjct: 20 VTKRELPLRPSSRKLGTHKRAKRKREEMSNVLRKMRSA 57
>UniRef50_A0DT55 Cluster: 60S ribosomal protein L36; n=5;
Oligohymenophorea|Rep: 60S ribosomal protein L36 -
Paramecium tetraurelia
Length = 110
Score = 45.2 bits (102), Expect = 5e-04
Identities = 28/69 (40%), Positives = 39/69 (56%)
Frame = +3
Query: 48 RFEIAVGLRKGHKTTKISAGRKGITDKAIRIRPARLKGLQTKHSKFVRDLVREVVGHAQY 227
R IAVGL +G T+ + T K +R RP++ KG K VR +++EV G + Y
Sbjct: 3 RTGIAVGLNRGFITSSL-------TKKQLRRRPSQRKGTLGKRVLSVRKVIQEVAGLSPY 55
Query: 228 EKRAMELLK 254
EKR +EL K
Sbjct: 56 EKRIIELFK 64
Score = 31.9 bits (69), Expect = 5.4
Identities = 16/33 (48%), Positives = 21/33 (63%)
Frame = +2
Query: 266 KRALKFLKRRLGTHIRAKRKREELSNVLAQMRK 364
K+A K +RLGT+ R KRK E + N+ MRK
Sbjct: 72 KKAGKLAAKRLGTNRRGKRKIELVQNLYRAMRK 104
>UniRef50_Q8I713 Cluster: 60S Ribosomal protein L36, putative; n=2;
Plasmodium|Rep: 60S Ribosomal protein L36, putative -
Plasmodium falciparum (isolate 3D7)
Length = 130
Score = 44.0 bits (99), Expect = 0.001
Identities = 21/38 (55%), Positives = 28/38 (73%), Gaps = 1/38 (2%)
Frame = +2
Query: 266 KRALKFLKRRLGTHIRAKRKREELSN-VLAQMRKAAAR 376
KR+LK+ K++LGTH R K KREE+ V+ Q RKAA +
Sbjct: 92 KRSLKYAKKKLGTHKRGKAKREEIQKVVILQRRKAAEK 129
Score = 35.9 bits (79), Expect = 0.33
Identities = 13/29 (44%), Positives = 22/29 (75%)
Frame = +3
Query: 168 TKHSKFVRDLVREVVGHAQYEKRAMELLK 254
+K + ++D+VRE+ G + YEKR +EL+K
Sbjct: 56 SKRKELIKDVVREITGFSPYEKRIIELIK 84
>UniRef50_Q7R9S3 Cluster: 60S ribosomal protein L36; n=2;
Plasmodium|Rep: 60S ribosomal protein L36 - Plasmodium
yoelii yoelii
Length = 113
Score = 44.0 bits (99), Expect = 0.001
Identities = 18/36 (50%), Positives = 26/36 (72%)
Frame = +2
Query: 266 KRALKFLKRRLGTHIRAKRKREELSNVLAQMRKAAA 373
KR+LK+ K++LGTH R K KREE+ ++ R+ AA
Sbjct: 74 KRSLKYAKKKLGTHKRGKAKREEIQKIVMMQRRKAA 109
Score = 41.1 bits (92), Expect = 0.009
Identities = 26/70 (37%), Positives = 36/70 (51%)
Frame = +3
Query: 45 PRFEIAVGLRKGHKTTKISAGRKGITDKAIRIRPARLKGLQTKHSKFVRDLVREVVGHAQ 224
P IAVG GH TK S +K I K++ K+ + D+VRE+ G +
Sbjct: 9 PSTGIAVGFNSGHIVTKRSV-KKSIKKKSV-----------PKNKDLINDVVREIAGFSP 56
Query: 225 YEKRAMELLK 254
YEKR +EL+K
Sbjct: 57 YEKRLIELIK 66
>UniRef50_Q16KP4 Cluster: 60S ribosomal protein L36; n=1; Aedes
aegypti|Rep: 60S ribosomal protein L36 - Aedes aegypti
(Yellowfever mosquito)
Length = 86
Score = 44.0 bits (99), Expect = 0.001
Identities = 25/59 (42%), Positives = 35/59 (59%), Gaps = 3/59 (5%)
Frame = +3
Query: 87 TTKISAGRKGITDKAIRIRPARLKG---LQTKHSKFVRDLVREVVGHAQYEKRAMELLK 254
T + G K + I+ R RL +QTK +K VRDL+ EVV HA ++K+ M+LLK
Sbjct: 9 TNRHKLGNKSYKLRQIQYREDRLSRTNEIQTKLTKLVRDLIHEVVVHATFKKKDMQLLK 67
>UniRef50_P05745 Cluster: 60S ribosomal protein L36-A; n=26;
Fungi/Metazoa group|Rep: 60S ribosomal protein L36-A -
Saccharomyces cerevisiae (Baker's yeast)
Length = 100
Score = 44.0 bits (99), Expect = 0.001
Identities = 27/72 (37%), Positives = 41/72 (56%)
Frame = +3
Query: 39 MAPRFEIAVGLRKGHKTTKISAGRKGITDKAIRIRPARLKGLQTKHSKFVRDLVREVVGH 218
M + IA+GL KG K T ++ K I+ K KG + +KFVR LVRE+ G
Sbjct: 1 MTVKTGIAIGLNKGKKVTSMTPAPK-ISYK---------KGAASNRTKFVRSLVREIAGL 50
Query: 219 AQYEKRAMELLK 254
+ YE+R ++L++
Sbjct: 51 SPYERRLIDLIR 62
Score = 39.5 bits (88), Expect = 0.027
Identities = 18/36 (50%), Positives = 26/36 (72%)
Frame = +2
Query: 257 SKDKRALKFLKRRLGTHIRAKRKREELSNVLAQMRK 364
S +KRA K K+RLG+ RAK K EE++N++A R+
Sbjct: 64 SGEKRARKVAKKRLGSFTRAKAKVEEMNNIIAASRR 99
>UniRef50_UPI00015538C3 Cluster: PREDICTED: similar to 60S ribosomal
protein L36; n=1; Mus musculus|Rep: PREDICTED: similar
to 60S ribosomal protein L36 - Mus musculus
Length = 129
Score = 42.7 bits (96), Expect = 0.003
Identities = 21/47 (44%), Positives = 30/47 (63%)
Frame = +3
Query: 123 DKAIRIRPARLKGLQTKHSKFVRDLVREVVGHAQYEKRAMELLKCQK 263
+K ++R ++ G TKH+KF+ + RE+ G A YE RA ELLK K
Sbjct: 70 NKGHKVRHSQCHGSLTKHTKFMWGVNREMCGFASYEWRATELLKVSK 116
>UniRef50_Q38CY6 Cluster: 60S ribosomal protein L36; n=2;
Trypanosoma brucei|Rep: 60S ribosomal protein L36 -
Trypanosoma brucei
Length = 109
Score = 40.3 bits (90), Expect = 0.016
Identities = 19/37 (51%), Positives = 25/37 (67%)
Frame = +2
Query: 254 VSKDKRALKFLKRRLGTHIRAKRKREELSNVLAQMRK 364
V KDKRALKF K+RLG+ AK++R ++ L Q K
Sbjct: 71 VGKDKRALKFCKKRLGSIKAAKKRRAKVEEALRQQTK 107
Score = 32.7 bits (71), Expect = 3.1
Identities = 24/77 (31%), Positives = 36/77 (46%)
Frame = +3
Query: 33 EIMAPRFEIAVGLRKGHKTTKISAGRKGITDKAIRIRPARLKGLQTKHSKFVRDLVREVV 212
E PR I G KG+KTT+ A R D+ L K + V+ ++ ++V
Sbjct: 7 EAPVPRTGIIAGFNKGYKTTR-RARRPSSNDRY---------ALPHKKLRAVKAIISDLV 56
Query: 213 GHAQYEKRAMELLKCQK 263
G + E+R ELL+ K
Sbjct: 57 GFSPMERRVQELLRVGK 73
>UniRef50_Q4QCE1 Cluster: 60S ribosomal protein l36, putative; n=9;
Trypanosomatidae|Rep: 60S ribosomal protein l36,
putative - Leishmania major
Length = 105
Score = 37.9 bits (84), Expect = 0.083
Identities = 17/37 (45%), Positives = 23/37 (62%)
Frame = +2
Query: 254 VSKDKRALKFLKRRLGTHIRAKRKREELSNVLAQMRK 364
V K+KRALK+ K+RLG AK+KR ++ L K
Sbjct: 66 VGKEKRALKYCKKRLGDFTAAKKKRSKMEEALRHATK 102
>UniRef50_Q55AQ9 Cluster: 60S ribosomal protein L36; n=2;
Dictyostelium discoideum|Rep: 60S ribosomal protein L36
- Dictyostelium discoideum AX4
Length = 105
Score = 36.3 bits (80), Expect = 0.25
Identities = 18/38 (47%), Positives = 28/38 (73%)
Frame = +2
Query: 263 DKRALKFLKRRLGTHIRAKRKREELSNVLAQMRKAAAR 376
DKRALK K+RLG+ K+KR++++N+ RKA+A+
Sbjct: 71 DKRALKVAKKRLGSIQAGKKKRDDIANI---NRKASAK 105
Score = 35.1 bits (77), Expect = 0.58
Identities = 15/33 (45%), Positives = 22/33 (66%)
Frame = +3
Query: 156 KGLQTKHSKFVRDLVREVVGHAQYEKRAMELLK 254
K + TK +RD++RE+ G + YE+R ELLK
Sbjct: 35 KQVVTKRVAAIRDVIREISGFSPYERRVSELLK 67
>UniRef50_Q7QRE6 Cluster: 60S ribosomal protein L36; n=1; Giardia
lamblia ATCC 50803|Rep: 60S ribosomal protein L36 -
Giardia lamblia ATCC 50803
Length = 90
Score = 35.5 bits (78), Expect = 0.44
Identities = 15/29 (51%), Positives = 23/29 (79%)
Frame = +2
Query: 254 VSKDKRALKFLKRRLGTHIRAKRKREELS 340
++KD+ AL++ K+RLG RAK KR++LS
Sbjct: 56 MNKDRHALRYAKKRLGNIKRAKAKRDQLS 84
Score = 31.5 bits (68), Expect = 7.2
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +3
Query: 174 HSKFVRDLVREVVGHAQYEKRAMELLKCQK 263
H +FV+ +++E G A YE +ELL+ K
Sbjct: 29 HQEFVKSIIQECTGMAPYEMHIIELLRMNK 58
>UniRef50_UPI0000DB6F2C Cluster: PREDICTED: similar to Myosin heavy
chain-like CG31045-PE, isoform E; n=1; Apis
mellifera|Rep: PREDICTED: similar to Myosin heavy
chain-like CG31045-PE, isoform E - Apis mellifera
Length = 481
Score = 34.7 bits (76), Expect = 0.77
Identities = 26/75 (34%), Positives = 38/75 (50%)
Frame = +1
Query: 169 RNTPSLSVI*YAKLSDTLNMRRGLWSYLSVKRQACSEVLEATIGHTHPRQEEA*RT*QRA 348
RNT VI Y + L+ G + ++ K +ACSE E IG + Q RT Q+
Sbjct: 195 RNTLQNEVIAYQNVPTHLS---GFGNAVN-KEEACSEE-ETQIGQ-NSWQVSPQRTSQQT 248
Query: 349 RSDEEGSRQAHHHHH 393
+ ++ +Q HHHHH
Sbjct: 249 QQQQQNQQQHHHHHH 263
>UniRef50_A7TBW5 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 208
Score = 34.7 bits (76), Expect = 0.77
Identities = 14/19 (73%), Positives = 17/19 (89%)
Frame = +3
Query: 39 MAPRFEIAVGLRKGHKTTK 95
MAP+ E+AVGL+KGHK TK
Sbjct: 155 MAPKVEMAVGLQKGHKVTK 173
>UniRef50_A2F3E0 Cluster: Ribosomal protein L36e, putative; n=4;
Trichomonas vaginalis G3|Rep: Ribosomal protein L36e,
putative - Trichomonas vaginalis G3
Length = 93
Score = 32.7 bits (71), Expect = 3.1
Identities = 14/34 (41%), Positives = 22/34 (64%)
Frame = +2
Query: 254 VSKDKRALKFLKRRLGTHIRAKRKREELSNVLAQ 355
+ + + A +FLK+RLGTH RA +K L V+ +
Sbjct: 52 IERRRAARQFLKKRLGTHRRAMKKLNTLEEVVQE 85
>UniRef50_Q2L2W5 Cluster: Phage protein; n=1; Bordetella avium
197N|Rep: Phage protein - Bordetella avium (strain 197N)
Length = 416
Score = 31.1 bits (67), Expect = 9.5
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = +3
Query: 132 IRIRPARLKGLQTKHSKFVRDLVREVVGHAQ 224
+R ARL G+QTKH+K D V+ AQ
Sbjct: 286 LRAAQARLAGIQTKHAKAAADAATAVIKRAQ 316
>UniRef50_Q0KIB0 Cluster: CG34113-PO, isoform O; n=6; Diptera|Rep:
CG34113-PO, isoform O - Drosophila melanogaster (Fruit
fly)
Length = 1689
Score = 31.1 bits (67), Expect = 9.5
Identities = 20/57 (35%), Positives = 29/57 (50%)
Frame = +2
Query: 2 KRSFSSDLSVRNHGSSF*NRSRPAKRPQNN*NIRWPQGYHRQSHQN*AS*TKGSSNE 172
K S SS S R+ S+ ++S K+P N R + H+Q HQ KG++NE
Sbjct: 807 KGSSSSSRSRRSSSSNINSKSNNGKQPAKYFNKR-QKNMHKQKHQQKLKQLKGTTNE 862
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 382,851,350
Number of Sequences: 1657284
Number of extensions: 6609178
Number of successful extensions: 20433
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 18524
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19937
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 19389441554
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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