Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0325.Seq
         (449 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L05080-1|AAA28420.1|  873|Drosophila melanogaster calphotin prot...    28   6.7  
AY058315-1|AAL13544.1|  864|Drosophila melanogaster GH08002p pro...    28   6.7  
AE014297-1457|AAF54754.1|  864|Drosophila melanogaster CG4795-PB...    28   6.7  
AE014297-1456|AAF54755.1|  842|Drosophila melanogaster CG4795-PA...    28   6.7  

>L05080-1|AAA28420.1|  873|Drosophila melanogaster calphotin
           protein.
          Length = 873

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 12/27 (44%), Positives = 14/27 (51%)
 Frame = -1

Query: 443 APTVPAAPIPPQARPGQAQPLQAVLLP 363
           AP V AAP PP A P    P+    +P
Sbjct: 89  APPVVAAPTPPAASPVSTPPVAVAQIP 115


>AY058315-1|AAL13544.1|  864|Drosophila melanogaster GH08002p
           protein.
          Length = 864

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 12/27 (44%), Positives = 14/27 (51%)
 Frame = -1

Query: 443 APTVPAAPIPPQARPGQAQPLQAVLLP 363
           AP V AAP PP A P    P+    +P
Sbjct: 82  APPVVAAPTPPAASPVSTPPVAVAQIP 108


>AE014297-1457|AAF54754.1|  864|Drosophila melanogaster CG4795-PB,
           isoform B protein.
          Length = 864

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 12/27 (44%), Positives = 14/27 (51%)
 Frame = -1

Query: 443 APTVPAAPIPPQARPGQAQPLQAVLLP 363
           AP V AAP PP A P    P+    +P
Sbjct: 82  APPVVAAPTPPAASPVSTPPVAVAQIP 108


>AE014297-1456|AAF54755.1|  842|Drosophila melanogaster CG4795-PA,
           isoform A protein.
          Length = 842

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 12/27 (44%), Positives = 14/27 (51%)
 Frame = -1

Query: 443 APTVPAAPIPPQARPGQAQPLQAVLLP 363
           AP V AAP PP A P    P+    +P
Sbjct: 82  APPVVAAPTPPAASPVSTPPVAVAQIP 108


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,426,324
Number of Sequences: 53049
Number of extensions: 244739
Number of successful extensions: 744
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 688
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 739
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1455824790
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)