Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0322.Seq
         (598 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esteras...    27   0.12 
AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.      27   0.12 
AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.      27   0.12 
AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax pr...    25   0.37 
AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esteras...    25   0.37 
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    24   1.1  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           24   1.1  
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    22   4.5  

>AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esterase
           protein.
          Length = 517

 Score = 27.1 bits (57), Expect = 0.12
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = -1

Query: 493 VNKYTELKEEILRIWXMNKVYIVPLV 416
           V+K  ++ EE+  IW + KVY  P+V
Sbjct: 256 VDKLLQISEEVANIWGLKKVY-APVV 280


>AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.
          Length = 515

 Score = 27.1 bits (57), Expect = 0.12
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = -1

Query: 493 VNKYTELKEEILRIWXMNKVYIVPLV 416
           V+K  ++ EE+  IW + KVY  P+V
Sbjct: 254 VDKLLQISEEVANIWGLKKVY-APVV 278


>AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.
          Length = 517

 Score = 27.1 bits (57), Expect = 0.12
 Identities = 10/26 (38%), Positives = 18/26 (69%)
 Frame = -1

Query: 493 VNKYTELKEEILRIWXMNKVYIVPLV 416
           V+++ ++ EE+  IW + KVY  P+V
Sbjct: 256 VDEFLQISEEVANIWGLKKVY-APVV 280


>AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax
           protein.
          Length = 314

 Score = 25.4 bits (53), Expect = 0.37
 Identities = 11/32 (34%), Positives = 17/32 (53%)
 Frame = -3

Query: 356 SRKHVHDHAKSRNIKHMPYSPSILAGRPKYSA 261
           S +H H H ++R  +  PY  S+ A    YS+
Sbjct: 50  SSQHHHHHLQARPPQDSPYDASVAAACKLYSS 81


>AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esterase
           protein.
          Length = 515

 Score = 25.4 bits (53), Expect = 0.37
 Identities = 10/26 (38%), Positives = 17/26 (65%)
 Frame = -1

Query: 493 VNKYTELKEEILRIWXMNKVYIVPLV 416
           V+K  ++ E++  IW + KVY  P+V
Sbjct: 254 VDKLLQISEKVANIWGLKKVY-APVV 278


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 8/27 (29%), Positives = 19/27 (70%)
 Frame = -1

Query: 103 ITLTLKDRKITYLIDIAIPNSENIRKK 23
           I +  ++R++ +  D  +PN++N+R+K
Sbjct: 277 IKIWFQNRRMKWKKDNKLPNTKNVRRK 303


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 8/27 (29%), Positives = 19/27 (70%)
 Frame = -1

Query: 103 ITLTLKDRKITYLIDIAIPNSENIRKK 23
           I +  ++R++ +  D  +PN++N+R+K
Sbjct: 277 IKIWFQNRRMKWKKDNKLPNTKNVRRK 303


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -1

Query: 244 TWLRPVIFIIPKYLKYFE 191
           T L+ V F +P+ L YF+
Sbjct: 214 TILQTVFFTVPRVLMYFD 231


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 123,079
Number of Sequences: 336
Number of extensions: 2648
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15039504
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)