Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0322.Seq
         (598 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT003255-1|AAO25012.1|  627|Drosophila melanogaster LD25005p pro...    29   3.6  
AY058581-1|AAL13810.1|  623|Drosophila melanogaster LD27537p pro...    29   3.6  
AY052132-1|AAK93556.1|  920|Drosophila melanogaster SD08128p pro...    29   3.6  
AE014296-3415|AAF51638.1|  920|Drosophila melanogaster CG11399-P...    29   3.6  
AE014296-2472|AAF49666.1|  623|Drosophila melanogaster CG6854-PB...    29   3.6  
AE014296-2471|AAF49665.1|  627|Drosophila melanogaster CG6854-PC...    29   3.6  
AY118855-1|AAM50715.1|  240|Drosophila melanogaster GM21150p pro...    29   6.3  
AE014298-1844|AAF48224.1|  240|Drosophila melanogaster CG2200-PA...    29   6.3  
AY094813-1|AAM11166.1| 1413|Drosophila melanogaster LD30602p pro...    28   8.4  
AE014134-2739|AAF53547.2| 1413|Drosophila melanogaster CG31738-P...    28   8.4  
AE014134-2738|AAF53546.3| 1700|Drosophila melanogaster CG31738-P...    28   8.4  

>BT003255-1|AAO25012.1|  627|Drosophila melanogaster LD25005p
           protein.
          Length = 627

 Score = 29.5 bits (63), Expect = 3.6
 Identities = 16/61 (26%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
 Frame = -1

Query: 469 EEILRIWXMNKVYIVPLVLSSTGVIPKHLLQSLKI-LDIAENTYMTMQKAAILNTCRIVR 293
           ++++ I  +N +Y VPL++   GVI ++L + L++ +D+++ T    Q   +      VR
Sbjct: 238 DQVICIHDLNSIYHVPLLMEQNGVI-EYLNERLQLNIDMSKRTKCLQQWRDLARRTETVR 296

Query: 292 Q 290
           +
Sbjct: 297 R 297


>AY058581-1|AAL13810.1|  623|Drosophila melanogaster LD27537p
           protein.
          Length = 623

 Score = 29.5 bits (63), Expect = 3.6
 Identities = 16/61 (26%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
 Frame = -1

Query: 469 EEILRIWXMNKVYIVPLVLSSTGVIPKHLLQSLKI-LDIAENTYMTMQKAAILNTCRIVR 293
           ++++ I  +N +Y VPL++   GVI ++L + L++ +D+++ T    Q   +      VR
Sbjct: 234 DQVICIHDLNSIYHVPLLMEQNGVI-EYLNERLQLNIDMSKRTKCLQQWRDLARRTETVR 292

Query: 292 Q 290
           +
Sbjct: 293 R 293


>AY052132-1|AAK93556.1|  920|Drosophila melanogaster SD08128p
           protein.
          Length = 920

 Score = 29.5 bits (63), Expect = 3.6
 Identities = 12/32 (37%), Positives = 16/32 (50%)
 Frame = -3

Query: 386 PTPIFKNIRHSRKHVHDHAKSRNIKHMPYSPS 291
           PTPI  N+   ++H H H K R    M   P+
Sbjct: 190 PTPIIPNMHQQQQHQHHHLKRRPSDDMHIHPN 221


>AE014296-3415|AAF51638.1|  920|Drosophila melanogaster CG11399-PB
           protein.
          Length = 920

 Score = 29.5 bits (63), Expect = 3.6
 Identities = 12/32 (37%), Positives = 16/32 (50%)
 Frame = -3

Query: 386 PTPIFKNIRHSRKHVHDHAKSRNIKHMPYSPS 291
           PTPI  N+   ++H H H K R    M   P+
Sbjct: 190 PTPIIPNMHQQQQHQHHHLKRRPSDDMHIHPN 221


>AE014296-2472|AAF49666.1|  623|Drosophila melanogaster CG6854-PB,
           isoform B protein.
          Length = 623

 Score = 29.5 bits (63), Expect = 3.6
 Identities = 16/61 (26%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
 Frame = -1

Query: 469 EEILRIWXMNKVYIVPLVLSSTGVIPKHLLQSLKI-LDIAENTYMTMQKAAILNTCRIVR 293
           ++++ I  +N +Y VPL++   GVI ++L + L++ +D+++ T    Q   +      VR
Sbjct: 234 DQVICIHDLNSIYHVPLLMEQNGVI-EYLNERLQLNIDMSKRTKCLQQWRDLARRTETVR 292

Query: 292 Q 290
           +
Sbjct: 293 R 293


>AE014296-2471|AAF49665.1|  627|Drosophila melanogaster CG6854-PC,
           isoform C protein.
          Length = 627

 Score = 29.5 bits (63), Expect = 3.6
 Identities = 16/61 (26%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
 Frame = -1

Query: 469 EEILRIWXMNKVYIVPLVLSSTGVIPKHLLQSLKI-LDIAENTYMTMQKAAILNTCRIVR 293
           ++++ I  +N +Y VPL++   GVI ++L + L++ +D+++ T    Q   +      VR
Sbjct: 238 DQVICIHDLNSIYHVPLLMEQNGVI-EYLNERLQLNIDMSKRTKCLQQWRDLARRTETVR 296

Query: 292 Q 290
           +
Sbjct: 297 R 297


>AY118855-1|AAM50715.1|  240|Drosophila melanogaster GM21150p
           protein.
          Length = 240

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 13/40 (32%), Positives = 22/40 (55%)
 Frame = -3

Query: 365 IRHSRKHVHDHAKSRNIKHMPYSPSILAGRPKYSASRNEA 246
           + H+R  + D  KS N+K + + P  L    KY+A+  +A
Sbjct: 21  LEHARGQLEDLFKSANVKTVLFVPYALRDHDKYTATVRDA 60


>AE014298-1844|AAF48224.1|  240|Drosophila melanogaster CG2200-PA
           protein.
          Length = 240

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 13/40 (32%), Positives = 22/40 (55%)
 Frame = -3

Query: 365 IRHSRKHVHDHAKSRNIKHMPYSPSILAGRPKYSASRNEA 246
           + H+R  + D  KS N+K + + P  L    KY+A+  +A
Sbjct: 21  LEHARGQLEDLFKSANVKTVLFVPYALRDHDKYTATVRDA 60


>AY094813-1|AAM11166.1| 1413|Drosophila melanogaster LD30602p
           protein.
          Length = 1413

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = -3

Query: 359 HSRKHVHDHAKSRNIKHMPYSPS 291
           HS  H H H   +   H P+SPS
Sbjct: 114 HSHSHAHSHTHPQPHAHSPHSPS 136


>AE014134-2739|AAF53547.2| 1413|Drosophila melanogaster CG31738-PA,
           isoform A protein.
          Length = 1413

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = -3

Query: 359 HSRKHVHDHAKSRNIKHMPYSPS 291
           HS  H H H   +   H P+SPS
Sbjct: 114 HSHSHAHSHTHPQPHAHSPHSPS 136


>AE014134-2738|AAF53546.3| 1700|Drosophila melanogaster CG31738-PB,
           isoform B protein.
          Length = 1700

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = -3

Query: 359 HSRKHVHDHAKSRNIKHMPYSPS 291
           HS  H H H   +   H P+SPS
Sbjct: 401 HSHSHAHSHTHPQPHAHSPHSPS 423


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,664,265
Number of Sequences: 53049
Number of extensions: 422324
Number of successful extensions: 1188
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1137
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1172
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2420893683
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)