Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0320.Seq
         (598 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    26   0.28 
EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxyla...    25   0.48 
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    23   2.0  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    23   2.6  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   2.6  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    23   2.6  
AF321227-6|AAK16426.1|  150|Tribolium castaneum Pb protein.            21   6.0  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    21   6.0  
AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    21   7.9  

>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 25.8 bits (54), Expect = 0.28
 Identities = 15/50 (30%), Positives = 25/50 (50%)
 Frame = -2

Query: 399 NYYFIIIRH**KHYFNFKQTYEHLFLPLKNEKRCKYIKNSNAFCYCFKVY 250
           NYY I++       F  ++T+  L   LKN + C  IK +  +CY +  +
Sbjct: 79  NYYVIVVTT-----FYKRRTWTRL---LKNLESCAKIKKTKRYCYYYYAF 120


>EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxylase
           protein.
          Length = 475

 Score = 25.0 bits (52), Expect = 0.48
 Identities = 13/51 (25%), Positives = 24/51 (47%)
 Frame = -3

Query: 392 ILLLFDINKNITLILNKHTSISFYRSKMKRDASI*KIQTRFVIALKCIRYR 240
           +L L+ I +N+   + KH  ++ Y   + R     +I    V+ L C R +
Sbjct: 363 VLRLYGI-ENLQAFIRKHVELAHYFESLVRGDERFEITEEVVLGLVCFRLK 412


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 12/35 (34%), Positives = 20/35 (57%)
 Frame = -2

Query: 543 EILSYKKKLKRESNFGKQFLKGNIDGARKRSNAGR 439
           ++L+YK + KR  N  K F+K  +D + +   A R
Sbjct: 277 QVLAYKIEAKRRDNEIKMFVK-IVDASCRNFTAAR 310


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = +3

Query: 192 KITRKQRTEDERLNKT 239
           K  +++ TEDE LNKT
Sbjct: 267 KTIKEKYTEDEELNKT 282


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 7/17 (41%), Positives = 13/17 (76%)
 Frame = -2

Query: 426  ATAREIRGKNYYFIIIR 376
            AT +E+R K Y+F +++
Sbjct: 1018 ATIQEVRAKIYFFYLVK 1034


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 7/17 (41%), Positives = 13/17 (76%)
 Frame = -2

Query: 426 ATAREIRGKNYYFIIIR 376
           AT +E+R K Y+F +++
Sbjct: 299 ATIQEVRAKIYFFYLVK 315


>AF321227-6|AAK16426.1|  150|Tribolium castaneum Pb protein.
          Length = 150

 Score = 21.4 bits (43), Expect = 6.0
 Identities = 8/22 (36%), Positives = 9/22 (40%)
 Frame = -3

Query: 131 WLRRRRGCPSPVSCPNRRCCRT 66
           WL    G P P + P   C  T
Sbjct: 37  WLAAASGAPHPAALPIEGCNET 58


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 21.4 bits (43), Expect = 6.0
 Identities = 8/22 (36%), Positives = 9/22 (40%)
 Frame = -3

Query: 131 WLRRRRGCPSPVSCPNRRCCRT 66
           WL    G P P + P   C  T
Sbjct: 37  WLAAASGAPHPAALPIEGCNET 58


>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 7/27 (25%), Positives = 15/27 (55%)
 Frame = -3

Query: 233 VQPFVLSALFPRDFDSWRLSSRSYRLF 153
           ++ F L+  F +    W + + +YRL+
Sbjct: 7   LEAFKLNTFFLKALTVWHVENPTYRLY 33


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 127,235
Number of Sequences: 336
Number of extensions: 2607
Number of successful extensions: 11
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15039504
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)