Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0320.Seq
(598 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z82285-3|CAD56246.1| 573|Caenorhabditis elegans Hypothetical pr... 36 0.022
Z19153-2|CAA79549.1| 493|Caenorhabditis elegans Hypothetical pr... 35 0.038
AF003138-5|AAL77178.1| 488|Caenorhabditis elegans Hypothetical ... 33 0.12
AF003138-3|AAM15568.1| 504|Caenorhabditis elegans Hypothetical ... 33 0.12
AF003138-2|AAM15567.1| 546|Caenorhabditis elegans Hypothetical ... 33 0.12
Z70037-1|CAA93878.1| 493|Caenorhabditis elegans Hypothetical pr... 33 0.20
Z22177-5|CAA80150.1| 576|Caenorhabditis elegans Hypothetical pr... 32 0.27
L23649-1|AAA27912.1| 568|Caenorhabditis elegans Hypothetical pr... 32 0.27
AF095787-1|AAC64972.1| 563|Caenorhabditis elegans EAT-4 protein. 32 0.27
Z81470-2|CAB03882.2| 422|Caenorhabditis elegans Hypothetical pr... 31 0.82
U97012-8|AAN60537.1| 103|Caenorhabditis elegans Hypothetical pr... 30 1.4
AF022973-2|AAC25800.2| 527|Caenorhabditis elegans Hypothetical ... 30 1.4
AF022973-1|AAT81194.1| 513|Caenorhabditis elegans Hypothetical ... 30 1.4
U41110-1|AAA82415.1| 506|Caenorhabditis elegans Hypothetical pr... 29 1.9
Z72508-5|CAA96638.1| 525|Caenorhabditis elegans Hypothetical pr... 29 2.5
Z83234-4|CAB70168.1| 367|Caenorhabditis elegans Hypothetical pr... 29 3.3
AF078788-3|AAC26966.1| 547|Caenorhabditis elegans Hypothetical ... 29 3.3
Z47070-1|CAA87340.1| 516|Caenorhabditis elegans Hypothetical pr... 28 4.4
Z82278-4|CAB05257.2| 487|Caenorhabditis elegans Hypothetical pr... 27 7.7
Z70756-5|CAA94791.2| 290|Caenorhabditis elegans Hypothetical pr... 27 7.7
AF067607-1|AAY86220.1| 342|Caenorhabditis elegans Hypothetical ... 27 7.7
>Z82285-3|CAD56246.1| 573|Caenorhabditis elegans Hypothetical
protein T28F3.4a protein.
Length = 573
Score = 35.9 bits (79), Expect = 0.022
Identities = 10/34 (29%), Positives = 20/34 (58%)
Frame = +2
Query: 5 TQAQWRKVFYIAGGVYVVCATFYNIFGSGRRQDW 106
T ++W+ +F + ++C + +FGSG Q+W
Sbjct: 469 TLSEWQTLFLVCAAANIICGAVFLVFGSGELQEW 502
>Z19153-2|CAA79549.1| 493|Caenorhabditis elegans Hypothetical
protein C38C10.2 protein.
Length = 493
Score = 35.1 bits (77), Expect = 0.038
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +2
Query: 5 TQAQWRKVFYIAGGVYVVCATFYNIFGSGRRQDW 106
TQ +W+ V ++ G+ + A ++IF SG Q W
Sbjct: 435 TQEEWQMVLWLTAGILTIGALLFSIFASGEVQPW 468
>AF003138-5|AAL77178.1| 488|Caenorhabditis elegans Hypothetical
protein F12B6.2b protein.
Length = 488
Score = 33.5 bits (73), Expect = 0.12
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +2
Query: 14 QWRKVFYIAGGVYVVCATFYNIFGSGRRQDW 106
+W+ FY GV V + IFG GR + W
Sbjct: 388 EWKCAFYSLAGVLAVTGLIFQIFGHGRTEPW 418
>AF003138-3|AAM15568.1| 504|Caenorhabditis elegans Hypothetical
protein F12B6.2c protein.
Length = 504
Score = 33.5 bits (73), Expect = 0.12
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +2
Query: 14 QWRKVFYIAGGVYVVCATFYNIFGSGRRQDW 106
+W+ FY GV V + IFG GR + W
Sbjct: 388 EWKCAFYSLAGVLAVTGLIFQIFGHGRTEPW 418
>AF003138-2|AAM15567.1| 546|Caenorhabditis elegans Hypothetical
protein F12B6.2a protein.
Length = 546
Score = 33.5 bits (73), Expect = 0.12
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +2
Query: 14 QWRKVFYIAGGVYVVCATFYNIFGSGRRQDW 106
+W+ FY GV V + IFG GR + W
Sbjct: 430 EWKCAFYSLAGVLAVTGLIFQIFGHGRTEPW 460
>Z70037-1|CAA93878.1| 493|Caenorhabditis elegans Hypothetical
protein T27D12.1 protein.
Length = 493
Score = 32.7 bits (71), Expect = 0.20
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +2
Query: 5 TQAQWRKVFYIAGGVYVVCATFYNIFGSGRRQDW 106
TQ +W+ VF I G V V+ F+ IF G +W
Sbjct: 422 TQEEWKYVFLITGAVMVITNIFFVIFVRGDPCEW 455
>Z22177-5|CAA80150.1| 576|Caenorhabditis elegans Hypothetical
protein ZK512.6 protein.
Length = 576
Score = 32.3 bits (70), Expect = 0.27
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +2
Query: 17 WRKVFYIAGGVYVVCATFYNIFGSGRRQDW 106
W VF +A ++ TFY ++ SG Q+W
Sbjct: 470 WTSVFLLASLIHFTGVTFYAVYASGELQEW 499
>L23649-1|AAA27912.1| 568|Caenorhabditis elegans Hypothetical
protein C02C2.4 protein.
Length = 568
Score = 32.3 bits (70), Expect = 0.27
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = +2
Query: 5 TQAQWRKVFYIAGGVYVVCATFYNIFGSGRRQDW 106
T A+W+ +F ++ + + +FGSG QDW
Sbjct: 489 TAAEWQNIFIGCSLAHIFSGSIFLLFGSGELQDW 522
>AF095787-1|AAC64972.1| 563|Caenorhabditis elegans EAT-4 protein.
Length = 563
Score = 32.3 bits (70), Expect = 0.27
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +2
Query: 17 WRKVFYIAGGVYVVCATFYNIFGSGRRQDW 106
W VF +A ++ TFY ++ SG Q+W
Sbjct: 457 WTSVFLLASLIHFTGVTFYAVYASGELQEW 486
>Z81470-2|CAB03882.2| 422|Caenorhabditis elegans Hypothetical
protein C14A6.2 protein.
Length = 422
Score = 30.7 bits (66), Expect = 0.82
Identities = 10/34 (29%), Positives = 18/34 (52%)
Frame = +2
Query: 5 TQAQWRKVFYIAGGVYVVCATFYNIFGSGRRQDW 106
T A+WR VF++ G+ VC + + + + W
Sbjct: 369 TIAEWRLVFFVHAGILAVCNLIFCLLATAKPAPW 402
>U97012-8|AAN60537.1| 103|Caenorhabditis elegans Hypothetical
protein C04E6.13 protein.
Length = 103
Score = 29.9 bits (64), Expect = 1.4
Identities = 10/26 (38%), Positives = 18/26 (69%)
Frame = -3
Query: 215 SALFPRDFDSWRLSSRSYRLFCWQPS 138
SAL PR+ D +++ ++ +F WQP+
Sbjct: 72 SALAPRNMDDYKIRTQQRHVFSWQPT 97
>AF022973-2|AAC25800.2| 527|Caenorhabditis elegans Hypothetical
protein F25G6.7a protein.
Length = 527
Score = 29.9 bits (64), Expect = 1.4
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +2
Query: 5 TQAQWRKVFYIAGGVYVVCATFYNIFGSGRRQDW 106
T A+W VFYI+ + + +N++GS Q W
Sbjct: 460 TAAEWNLVFYISTVIAIFPIIIFNVWGSTEVQWW 493
>AF022973-1|AAT81194.1| 513|Caenorhabditis elegans Hypothetical
protein F25G6.7b protein.
Length = 513
Score = 29.9 bits (64), Expect = 1.4
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +2
Query: 5 TQAQWRKVFYIAGGVYVVCATFYNIFGSGRRQDW 106
T A+W VFYI+ + + +N++GS Q W
Sbjct: 446 TAAEWNLVFYISTVIAIFPIIIFNVWGSTEVQWW 479
>U41110-1|AAA82415.1| 506|Caenorhabditis elegans Hypothetical
protein ZK682.2 protein.
Length = 506
Score = 29.5 bits (63), Expect = 1.9
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = +2
Query: 5 TQAQWRKVFYIAGGVYVVCATFYNIFGSGRRQDW 106
T +W+ VF + + VV F+ G+ QDW
Sbjct: 441 TADEWKIVFAVIAAICVVTGIFFQCCGTASLQDW 474
>Z72508-5|CAA96638.1| 525|Caenorhabditis elegans Hypothetical
protein F28H7.6 protein.
Length = 525
Score = 29.1 bits (62), Expect = 2.5
Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 3/36 (8%)
Frame = -2
Query: 318 LKNEKRCKY---IKNSNAFCYCFKVYSLPAFCSTFR 220
++N++ C + IK SN + YC VY F TFR
Sbjct: 213 IQNDEECHFRYPIKGSNEYQYCRHVYGDMHFTGTFR 248
>Z83234-4|CAB70168.1| 367|Caenorhabditis elegans Hypothetical
protein K09E4.1 protein.
Length = 367
Score = 28.7 bits (61), Expect = 3.3
Identities = 11/36 (30%), Positives = 18/36 (50%)
Frame = -3
Query: 197 DFDSWRLSSRSYRLFCWQPSWHWLRRRRGCPSPVSC 90
+ WRL S+ +++F +WH RG P+ C
Sbjct: 110 ELQDWRLFSQVHKIFLTDDAWHMSLYFRGGPTLEQC 145
>AF078788-3|AAC26966.1| 547|Caenorhabditis elegans Hypothetical
protein ZC190.6 protein.
Length = 547
Score = 28.7 bits (61), Expect = 3.3
Identities = 18/54 (33%), Positives = 31/54 (57%)
Frame = -3
Query: 422 LLGKYVVKITILLLFDINKNITLILNKHTSISFYRSKMKRDASI*KIQTRFVIA 261
L+ +V+ ITI+ L D++ + LI++ SI YR + A I ++ RF I+
Sbjct: 386 LVDFHVIAITIMNLVDMSALVILIISSQYSIQNYR----KTAGIASLEKRFQIS 435
>Z47070-1|CAA87340.1| 516|Caenorhabditis elegans Hypothetical
protein T09B9.2 protein.
Length = 516
Score = 28.3 bits (60), Expect = 4.4
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = +2
Query: 14 QWRKVFYIAGGVYVVCATFYNIFGSGRRQDW 106
+W VF I+ V ++ F+ ++GS R +W
Sbjct: 442 EWTIVFEISAFVAILPTIFFTLWGSAERTEW 472
>Z82278-4|CAB05257.2| 487|Caenorhabditis elegans Hypothetical
protein M162.5 protein.
Length = 487
Score = 27.5 bits (58), Expect = 7.7
Identities = 8/34 (23%), Positives = 16/34 (47%)
Frame = +2
Query: 5 TQAQWRKVFYIAGGVYVVCATFYNIFGSGRRQDW 106
T +WR VF++ G+ C + + + + W
Sbjct: 434 TITEWRLVFFVHAGILAACNLIFCLLATAKPAPW 467
>Z70756-5|CAA94791.2| 290|Caenorhabditis elegans Hypothetical
protein T06E4.5 protein.
Length = 290
Score = 27.5 bits (58), Expect = 7.7
Identities = 13/45 (28%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = -3
Query: 593 ARYICQ-LATKKKPRRNERFCLIKRS*RESLTSVNNS*KETLTEL 462
A +IC K+ + +++CLIK+ ++ TS NN K+ + ++
Sbjct: 200 AIWICYYFCVSKEKKLKKKYCLIKKPKTKATTSSNNEIKKNVLKM 244
>AF067607-1|AAY86220.1| 342|Caenorhabditis elegans Hypothetical
protein C18H7.10 protein.
Length = 342
Score = 27.5 bits (58), Expect = 7.7
Identities = 17/56 (30%), Positives = 29/56 (51%)
Frame = -2
Query: 594 CALHMPVSNEKKTPEK*EILSYKKKLKRESNFGKQFLKGNIDGARKRSNAGRRSQQ 427
C L VS EK TPE+ E+ + K +++ + K N D A+K+ N + + +
Sbjct: 195 CCLMCCVSGEKITPEEEEVEEEDVEAKGDNDKNDKNKKNNED-AKKKDNTQKDADE 249
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,392,627
Number of Sequences: 27780
Number of extensions: 237614
Number of successful extensions: 691
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 674
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 691
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1268802960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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