Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0319.Seq
(598 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_01_0682 - 5244805-5244919,5246468-5246613,5246813-5246994,524... 112 2e-25
01_06_1758 - 39681942-39682030,39682115-39682345,39682643-396826... 111 3e-25
01_05_0292 + 20518668-20519090,20519213-20519281,20520204-205204... 83 2e-16
03_02_0758 + 10954268-10954841,10955988-10957145,10957176-109572... 81 5e-16
11_06_0767 + 27121761-27123335,27123701-27123910,27124843-271249... 80 2e-15
01_01_0509 - 3713109-3713244,3713689-3713733,3713959-3714015,371... 77 8e-15
08_01_0353 - 3107628-3107774,3108177-3108213,3108248-3109164,310... 69 2e-12
08_01_0397 - 3509186-3510291,3510322-3512335 68 5e-12
02_01_0381 - 2764331-2764342,2768966-2769907 66 2e-11
06_03_1255 + 28780181-28781172,28782065-28782932 64 8e-11
07_03_1500 + 27001842-27002058,27002144-27002283,27002458-270025... 59 2e-09
06_03_0674 + 23422004-23422552,23423295-23423369,23424360-234244... 56 2e-08
02_01_0765 - 5694535-5694644,5695039-5696550,5697229-5697390,569... 54 7e-08
03_05_0865 - 28365430-28367640 53 2e-07
03_06_0365 - 33399422-33399925,33400470-33400583,33400762-334009... 51 6e-07
07_02_0023 - 11918735-11918827,11919139-11919231,11919320-119194... 50 1e-06
07_01_0725 - 5532803-5533324,5533631-5533657,5534285-5534398,553... 49 3e-06
05_01_0079 + 531617-531734,531987-532059,532152-532261,532400-53... 48 4e-06
04_04_0613 + 26617677-26617963,26618726-26618786,26619598-266198... 48 4e-06
10_08_0553 - 18720436-18720494,18721102-18721106,18721136-187212... 48 6e-06
02_05_0096 + 25785995-25786311,25786716-25786776,25787825-257880... 48 6e-06
09_05_0008 + 20042390-20042845,20043323-20043457,20043539-200436... 47 1e-05
11_06_0300 + 22095396-22096145,22096261-22096344,22097062-220973... 46 2e-05
08_02_0671 - 19890187-19890295,19891186-19891320,19891551-198919... 46 2e-05
01_01_0602 - 4484972-4485450,4485949-4485997,4486108-4486237,448... 46 2e-05
12_02_0340 - 17725866-17725884,17726046-17726326,17726842-177269... 46 3e-05
03_05_0997 + 29565311-29565664,29566134-29566298,29566572-295666... 45 5e-05
01_07_0333 - 42813789-42814073,42814229-42814315,42815083-428151... 44 7e-05
03_05_0619 - 26180980-26181105,26181329-26181417,26181518-261816... 44 9e-05
07_03_0601 - 19872780-19873099,19873148-19873151,19874196-198743... 43 2e-04
04_04_0476 - 25508952-25509004,25509245-25509326,25509453-255096... 43 2e-04
03_06_0344 - 33276366-33276548,33277044-33277169,33277254-332773... 42 3e-04
01_05_0721 + 24594815-24594834,24595207-24595313,24595417-245954... 42 5e-04
07_03_1566 + 27766336-27766393,27766480-27766609,27766728-277667... 41 9e-04
01_05_0722 + 24598426-24598649,24599113-24599219,24599319-245993... 40 0.001
06_03_0337 + 19678152-19678484,19678616-19678801,19679232-196794... 39 0.003
03_01_0059 + 484305-484617,484919-485406,485608-486092,486185-48... 39 0.003
02_05_1293 - 35520733-35520963,35521696-35521878,35522040-355222... 38 0.008
03_02_0189 - 6253659-6255380 37 0.014
02_05_0064 - 25529630-25531440,25531663-25531673,25533113-255331... 36 0.019
01_01_0447 - 3327727-3328144,3328438-3328688,3328820-3328909,332... 36 0.025
12_02_1076 - 25862671-25863159,25863290-25863451,25863614-258638... 33 0.23
05_07_0301 + 29087014-29088349,29088507-29088645,29090350-29091001 29 2.8
05_01_0372 - 2913518-2916562,2916674-2917528 29 2.8
07_01_0322 - 2258067-2258519,2258620-2258781,2258896-2259159,225... 29 3.7
04_01_0520 - 6852701-6855028,6855050-6855835,6856085-6856093 29 3.7
03_05_0712 - 27057858-27057941,27058093-27058182,27058268-270583... 28 4.9
12_02_0709 - 22359705-22360292,22360396-22360560,22360650-223611... 27 8.6
11_06_0691 - 26315738-26315848,26315939-26316163,26316249-263166... 27 8.6
08_02_0293 - 15424397-15428041 27 8.6
04_03_0399 - 15414405-15416717,15416739-15417524,15417776-15417784 27 8.6
02_05_1067 - 33858215-33858321,33858422-33858527,33859014-338592... 27 8.6
>01_01_0682 -
5244805-5244919,5246468-5246613,5246813-5246994,
5247069-5247295,5247382-5247467,5247564-5247656,
5247964-5248118,5248407-5248490,5248589-5248768,
5249587-5249828,5249927-5249982
Length = 521
Score = 112 bits (270), Expect = 2e-25
Identities = 48/106 (45%), Positives = 71/106 (66%)
Frame = +3
Query: 231 PTFQQKLLDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKT 410
P F++ P+V + EVE YR + E+TV G +V P++ F + FP+YV Q +
Sbjct: 49 PRFEKNFYVESPSVAGMTEEEVEAYRRRREITVEGRDVPKPVREFRDVGFPEYVLQEITK 108
Query: 411 MGYKEPTPIQAQGWPIAMSGKNLVGRSPNGFRQTLAYILPAIVHIN 548
G+ EPTPIQ+QGWP+A+ G++L+G + G +TLAY+LPAIVH+N
Sbjct: 109 AGFVEPTPIQSQGWPMALRGRDLIGIAETGSGKTLAYLLPAIVHVN 154
>01_06_1758 -
39681942-39682030,39682115-39682345,39682643-39682679,
39683604-39683835,39683937-39684022,39684126-39684218,
39684302-39684465,39684541-39684702,39684783-39684962,
39685079-39685515,39685614-39685669
Length = 588
Score = 111 bits (268), Expect = 3e-25
Identities = 46/113 (40%), Positives = 73/113 (64%)
Frame = +3
Query: 207 PRLGFCFTPTFQQKLLDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPD 386
P+ F F++ P V S +V +YR + ++TV G +V P++YF+EANFPD
Sbjct: 106 PKPDFRSLIPFEKNFYVECPAVQAMSDMDVSQYRRQRDITVEGHDVPKPVRYFQEANFPD 165
Query: 387 YVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGRSPNGFRQTLAYILPAIVHI 545
Y Q + G+ EPTPIQ+QGWP+A+ G++++G + G +TL+Y+LP +VH+
Sbjct: 166 YCMQAIAKSGFVEPTPIQSQGWPMALKGRDMIGIAQTGSGKTLSYLLPGLVHV 218
>01_05_0292 +
20518668-20519090,20519213-20519281,20520204-20520473,
20520734-20521084,20521251-20521528,20522755-20523099,
20523346-20523911,20525155-20525528
Length = 891
Score = 82.6 bits (195), Expect = 2e-16
Identities = 36/83 (43%), Positives = 52/83 (62%)
Frame = +3
Query: 297 EEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN 476
E YR++HE+TV G V PI FE FP + + ++ G+ PTPIQAQ WPIA+ ++
Sbjct: 130 EAYRHRHEITVVGDNVPAPITSFETGGFPPEILKEIQRAGFSSPTPIQAQSWPIALQCQD 189
Query: 477 LVGRSPNGFRQTLAYILPAIVHI 545
+V + G +TL Y+LP +HI
Sbjct: 190 VVAIAKTGSGKTLGYLLPGFMHI 212
>03_02_0758 +
10954268-10954841,10955988-10957145,10957176-10957216,
10957412-10957448,10957534-10957954,10958201-10958234
Length = 754
Score = 81.4 bits (192), Expect = 5e-16
Identities = 37/103 (35%), Positives = 58/103 (56%)
Frame = +3
Query: 237 FQQKLLDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMG 416
F + + P+V S EV +Y + VSG +V PI+ F + FP + + G
Sbjct: 179 FNKDFYEEKPSVSGMSEQEVADYMKSLAIRVSGFDVPRPIKSFADCGFPVQLMNAIAKQG 238
Query: 417 YKEPTPIQAQGWPIAMSGKNLVGRSPNGFRQTLAYILPAIVHI 545
Y++PT IQ Q PI +SG++++G + G +T A++LP IVHI
Sbjct: 239 YEKPTTIQCQALPIVLSGRDIIGIAKTGSGKTAAFVLPMIVHI 281
>11_06_0767 +
27121761-27123335,27123701-27123910,27124843-27124911,
27125387-27125656,27126027-27126377,27126480-27126757,
27126887-27128330
Length = 1398
Score = 79.8 bits (188), Expect = 2e-15
Identities = 33/83 (39%), Positives = 48/83 (57%)
Frame = +3
Query: 297 EEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN 476
+ YR HEVT G V P FE FP + Q + G+ PTPIQAQ WP+A+ ++
Sbjct: 584 DAYRQHHEVTAVGENVPPPFMTFEATGFPPEILQEIHAAGFLNPTPIQAQTWPVALQNRD 643
Query: 477 LVGRSPNGFRQTLAYILPAIVHI 545
+V + G +TL Y++PA +H+
Sbjct: 644 IVAIAKTGSGKTLGYLIPAFIHL 666
>01_01_0509 -
3713109-3713244,3713689-3713733,3713959-3714015,
3714088-3714438,3714585-3714862,3714939-3715289,
3715378-3715647,3716035-3716103,3716194-3716304,
3716503-3716583,3716825-3716914,3717032-3717262
Length = 689
Score = 77.4 bits (182), Expect = 8e-15
Identities = 32/81 (39%), Positives = 48/81 (59%)
Frame = +3
Query: 297 EEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN 476
E YR KHE+T+ G E P F+ FP + + V+ G+ PTPIQAQ WPIA+ ++
Sbjct: 160 EAYRAKHEITIVGNEAPAPFMTFQSTGFPPEILREVQQAGFSAPTPIQAQSWPIALRNRD 219
Query: 477 LVGRSPNGFRQTLAYILPAIV 539
+V + G +TL Y++P +
Sbjct: 220 IVAVAKTGSGKTLGYLIPGFI 240
>08_01_0353 -
3107628-3107774,3108177-3108213,3108248-3109164,
3109210-3110952
Length = 947
Score = 69.3 bits (162), Expect = 2e-12
Identities = 31/85 (36%), Positives = 52/85 (61%)
Frame = +3
Query: 291 EVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSG 470
EV YR E+ V G +V PI+ + ++ + +K +G+++P PIQAQ PI MSG
Sbjct: 263 EVATYRKNLELKVHGKDVPKPIKTWVQSGLTSKLLDTIKKLGFEKPMPIQAQALPIIMSG 322
Query: 471 KNLVGRSPNGFRQTLAYILPAIVHI 545
++ +G + G +TLA++LP + H+
Sbjct: 323 RDCIGIAKTGSGKTLAFVLPMLRHV 347
>08_01_0397 - 3509186-3510291,3510322-3512335
Length = 1039
Score = 68.1 bits (159), Expect = 5e-12
Identities = 31/92 (33%), Positives = 55/92 (59%)
Frame = +3
Query: 270 VLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQG 449
+ K + EV YR + E+ V G +V PI+ + ++ + +K +G+++P IQAQ
Sbjct: 395 ITKMAAEEVAAYRKQLELKVHGKDVPKPIKTWVQSGLTSKLLDTIKKLGFEKPMSIQAQA 454
Query: 450 WPIAMSGKNLVGRSPNGFRQTLAYILPAIVHI 545
PI MSG++ +G + G +TLA++LP + H+
Sbjct: 455 LPIIMSGRDCIGIAKTGSGKTLAFVLPMLRHV 486
>02_01_0381 - 2764331-2764342,2768966-2769907
Length = 317
Score = 66.1 bits (154), Expect = 2e-11
Identities = 31/93 (33%), Positives = 55/93 (59%), Gaps = 1/93 (1%)
Frame = +3
Query: 264 PTVLKRSPY-EVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQ 440
P L+R P + +E R K + V G +V P + F + P+ + + ++ G +PTPIQ
Sbjct: 150 PLRLRRMPRAKADELRRKWHILVDGDDVPPPARDFRDLRLPEPMLRKLREKGIVQPTPIQ 209
Query: 441 AQGWPIAMSGKNLVGRSPNGFRQTLAYILPAIV 539
QG P+ +SG++++G + G +TL ++LP I+
Sbjct: 210 VQGLPVVLSGRDMIGIAFTGSGKTLVFVLPLIM 242
>06_03_1255 + 28780181-28781172,28782065-28782932
Length = 619
Score = 64.1 bits (149), Expect = 8e-11
Identities = 30/93 (32%), Positives = 54/93 (58%), Gaps = 1/93 (1%)
Frame = +3
Query: 264 PTVLKRSPYE-VEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQ 440
P L+R P + R + V G +V P + F + P+ + + ++ G ++PTPIQ
Sbjct: 141 PLRLRRMPRSRADALRRSWHILVDGDDVPPPSRSFGDLRLPEPILRALRGKGIEKPTPIQ 200
Query: 441 AQGWPIAMSGKNLVGRSPNGFRQTLAYILPAIV 539
QG P+A+SG++++G + G +TL ++LP I+
Sbjct: 201 VQGLPVALSGRDMIGIAFTGSGKTLVFVLPLIM 233
>07_03_1500 +
27001842-27002058,27002144-27002283,27002458-27002549,
27002680-27002776,27002871-27002951,27003031-27003263,
27003876-27004070,27004149-27004239,27004324-27004446,
27004542-27004692,27005060-27005262
Length = 540
Score = 59.3 bits (137), Expect = 2e-09
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 4/84 (4%)
Frame = +3
Query: 306 RNKHEVTVSGVEVHNPIQYFEEA----NFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGK 473
R K ++ +SG V P++ FEE Y+ + +G++EPTPIQ Q PI +SG+
Sbjct: 125 RKKFDIHISGQNVPAPLENFEELVSRYGCDSYLVGNLSKLGFQEPTPIQRQAIPILLSGR 184
Query: 474 NLVGRSPNGFRQTLAYILPAIVHI 545
+P G +TLA++ P ++ I
Sbjct: 185 ECFACAPTGSGKTLAFLFPILMKI 208
>06_03_0674 +
23422004-23422552,23423295-23423369,23424360-23424443,
23424749-23424991,23425348-23425515,23425608-23425727,
23426372-23427016
Length = 627
Score = 56.4 bits (130), Expect = 2e-08
Identities = 27/72 (37%), Positives = 41/72 (56%)
Frame = +3
Query: 321 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGRSPNG 500
V VSG +V P FE A + V + V GY+ PTP+Q PIA++G++L+ + G
Sbjct: 72 VEVSGEDVPPPADGFEAAGLVEAVLRNVARCGYESPTPVQRYSMPIALAGRDLMACAQTG 131
Query: 501 FRQTLAYILPAI 536
+T A+ LP +
Sbjct: 132 SGKTAAFCLPVV 143
>02_01_0765 -
5694535-5694644,5695039-5696550,5697229-5697390,
5698015-5698057
Length = 608
Score = 54.4 bits (125), Expect = 7e-08
Identities = 23/84 (27%), Positives = 47/84 (55%)
Frame = +3
Query: 291 EVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSG 470
++ R+K ++ V G +V +PI F + P+ + ++ GY PTP+Q Q P ++
Sbjct: 160 QIASLRSKLDICVKGEDVPDPIMCFSSSGLPEKLVLNLEAAGYVMPTPVQMQVIPSSICN 219
Query: 471 KNLVGRSPNGFRQTLAYILPAIVH 542
++L+ + G +T ++++P I H
Sbjct: 220 RSLLVSADTGSGKTASFLVPIIAH 243
>03_05_0865 - 28365430-28367640
Length = 736
Score = 53.2 bits (122), Expect = 2e-07
Identities = 22/81 (27%), Positives = 46/81 (56%)
Frame = +3
Query: 303 YRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLV 482
+R ++ G +V P++ + E+ + + V+ GYKEP+PIQ P+ + ++++
Sbjct: 297 FREDFNISYKGSKVPRPMRKWSESKLGTELLRAVEKAGYKEPSPIQMASIPLGLQQRDVI 356
Query: 483 GRSPNGFRQTLAYILPAIVHI 545
G + G +T A++LP + +I
Sbjct: 357 GIAETGSGKTAAFVLPMLSYI 377
>03_06_0365 -
33399422-33399925,33400470-33400583,33400762-33400929,
33401305-33401547,33402148-33402231,33402323-33403098,
33404423-33404636
Length = 700
Score = 51.2 bits (117), Expect = 6e-07
Identities = 24/79 (30%), Positives = 44/79 (55%)
Frame = +3
Query: 321 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGRSPNG 500
V SG +V P+ F E + D + + ++ Y +PTP+Q PI+++G++L+ + G
Sbjct: 225 VETSGHDVPPPVNTFAEIDLGDALNENIRRCKYVKPTPVQRYAIPISIAGRDLMACAQTG 284
Query: 501 FRQTLAYILPAIVHINTNR 557
+T A+ P I I ++R
Sbjct: 285 SGKTAAFCFPIISGIMSSR 303
>07_02_0023 -
11918735-11918827,11919139-11919231,11919320-11919484,
11920234-11920327,11921012-11921136,11921228-11921313,
11921786-11921864,11923777-11923857,11924153-11924260,
11924870-11924994,11925110-11925530
Length = 489
Score = 50.4 bits (115), Expect = 1e-06
Identities = 25/76 (32%), Positives = 41/76 (53%)
Frame = +3
Query: 351 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGRSPNGFRQTLAYILP 530
P+ F P V K G++ P+PIQA WP + G++ +G + G +T+A+ +P
Sbjct: 92 PLSSFAATALPPQVLDCCK--GFERPSPIQAYAWPYLLDGRDFIGIAATGSGKTIAFGVP 149
Query: 531 AIVHINTNRLFGEVMA 578
A++H+ R GE A
Sbjct: 150 ALMHV--RRKMGEKSA 163
>07_01_0725 -
5532803-5533324,5533631-5533657,5534285-5534398,
5534564-5534731,5535951-5536193,5537178-5537261,
5537357-5538117,5539637-5539730,5540633-5540899,
5541311-5541316,5542538-5542657
Length = 801
Score = 48.8 bits (111), Expect = 3e-06
Identities = 24/79 (30%), Positives = 42/79 (53%)
Frame = +3
Query: 321 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGRSPNG 500
V SG +V P F E + D + + ++ Y +PTP+Q PI+++G++L+ + G
Sbjct: 311 VETSGHDVPPPANTFAEIDLGDALNENIRRCKYVKPTPVQRYAIPISIAGRDLMACAQTG 370
Query: 501 FRQTLAYILPAIVHINTNR 557
+T A+ P I I +R
Sbjct: 371 SGKTAAFCFPIISGIMRSR 389
>05_01_0079 +
531617-531734,531987-532059,532152-532261,532400-532543,
532628-532736,532836-533182,533260-533333,533478-533782,
534168-534294,534385-534414,534589-534837
Length = 561
Score = 48.4 bits (110), Expect = 4e-06
Identities = 22/45 (48%), Positives = 34/45 (75%)
Frame = +3
Query: 411 MGYKEPTPIQAQGWPIAMSGKNLVGRSPNGFRQTLAYILPAIVHI 545
MG++ PT IQAQ P+AMSG++++ ++ G +TLAY+ P IVH+
Sbjct: 42 MGFQAPTRIQAQAIPVAMSGQHMLVKAATGTGKTLAYLAP-IVHL 85
>04_04_0613 +
26617677-26617963,26618726-26618786,26619598-26619832,
26619958-26620196,26620493-26620744,26620844-26621024,
26621810-26621898,26622200-26622273,26622365-26622443
Length = 498
Score = 48.4 bits (110), Expect = 4e-06
Identities = 20/65 (30%), Positives = 40/65 (61%)
Frame = +3
Query: 363 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGRSPNGFRQTLAYILPAIVH 542
FE+ + G+ G++ P+PIQ + PIA++G +++ R+ NG +T A+ +PA+
Sbjct: 126 FEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEK 185
Query: 543 INTNR 557
I+ ++
Sbjct: 186 IDQDK 190
>10_08_0553 -
18720436-18720494,18721102-18721106,18721136-18721257,
18721390-18721478,18722136-18722316,18722403-18722654,
18722755-18722993,18723680-18723914,18724072-18724132,
18724632-18724987
Length = 532
Score = 48.0 bits (109), Expect = 6e-06
Identities = 20/65 (30%), Positives = 39/65 (60%)
Frame = +3
Query: 363 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGRSPNGFRQTLAYILPAIVH 542
FE+ + G+ G++ P+PIQ + PIA++G +++ R+ NG +T A+ +PA+
Sbjct: 149 FEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEK 208
Query: 543 INTNR 557
I+ +
Sbjct: 209 IDPEK 213
>02_05_0096 +
25785995-25786311,25786716-25786776,25787825-25788059,
25788292-25788530,25789700-25789951,25790043-25790223,
25790864-25790952,25791269-25791342,25791481-25791584,
25791919-25791957,25792324-25792436
Length = 567
Score = 48.0 bits (109), Expect = 6e-06
Identities = 20/65 (30%), Positives = 39/65 (60%)
Frame = +3
Query: 363 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGRSPNGFRQTLAYILPAIVH 542
FE+ + G+ G++ P+PIQ + PIA++G +++ R+ NG +T A+ +PA+
Sbjct: 136 FEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEK 195
Query: 543 INTNR 557
I+ +
Sbjct: 196 IDQEK 200
>09_05_0008 +
20042390-20042845,20043323-20043457,20043539-20043679,
20043771-20043882,20044084-20044154,20044251-20044405,
20044484-20044595,20044932-20045033,20045116-20045176,
20045251-20045422,20045512-20045608,20045692-20045786,
20045881-20046014,20046208-20046422
Length = 685
Score = 47.2 bits (107), Expect = 1e-05
Identities = 30/84 (35%), Positives = 49/84 (58%), Gaps = 2/84 (2%)
Frame = +3
Query: 291 EVEEYRNKHEVTVSGVEVHNPIQYFEEANF--PDYVQQGVKTMGYKEPTPIQAQGWPIAM 464
E EE ++ E+T SG E +P ANF + +++ +K+ G K PIQA + + +
Sbjct: 82 EEEEDDDEGELTASGDE--DPADPNALANFRISESLREKLKSKGIKALFPIQATTFDLVL 139
Query: 465 SGKNLVGRSPNGFRQTLAYILPAI 536
G +LVGR+ G +TLA++LP +
Sbjct: 140 DGHDLVGRARTGQGKTLAFVLPIL 163
>11_06_0300 +
22095396-22096145,22096261-22096344,22097062-22097304,
22098535-22098702,22098895-22099008,22099378-22099890
Length = 623
Score = 46.4 bits (105), Expect = 2e-05
Identities = 22/72 (30%), Positives = 37/72 (51%)
Frame = +3
Query: 321 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGRSPNG 500
V SG EV P+ F E + + ++ Y PTP+Q PI+++G++L+ + G
Sbjct: 143 VETSGREVPPPVGTFAEIDLGQALNDNIRRCKYVRPTPVQRYAIPISLAGRDLMACAQTG 202
Query: 501 FRQTLAYILPAI 536
+T A+ P I
Sbjct: 203 SGKTAAFCFPII 214
>08_02_0671 -
19890187-19890295,19891186-19891320,19891551-19891917,
19892909-19893044,19894924-19894974,19895053-19895134,
19895801-19895853,19895989-19896065,19896234-19896273,
19897666-19897767,19897989-19898031,19898127-19899288,
19899902-19900271
Length = 908
Score = 46.0 bits (104), Expect = 2e-05
Identities = 19/58 (32%), Positives = 34/58 (58%)
Frame = +3
Query: 363 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGRSPNGFRQTLAYILPAI 536
FE + V +GV+ GY+ PTPIQ + P+ ++G ++ + G +T A+++P I
Sbjct: 28 FESMGLCEEVYRGVRHKGYRVPTPIQRKAMPLILAGHDIAAMARTGSGKTAAFLVPMI 85
>01_01_0602 -
4484972-4485450,4485949-4485997,4486108-4486237,
4486636-4486778,4486819-4486877,4487167-4487200,
4487489-4487629,4487719-4487907,4488027-4488122,
4488163-4488225,4488588-4489097
Length = 630
Score = 46.0 bits (104), Expect = 2e-05
Identities = 27/71 (38%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
Frame = +3
Query: 354 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGRSPNGFRQTLAYILPA 533
+ FEE + V + MG +PT IQ G P ++G ++V S G +TLAY+LP
Sbjct: 109 VDSFEELGLGEEVMAALGEMGISKPTEIQCVGVPAVLAGTSVVLGSHTGSGKTLAYLLPL 168
Query: 534 I-VHI-NTNRL 560
+ + I NT RL
Sbjct: 169 VQIEIENTYRL 179
>12_02_0340 -
17725866-17725884,17726046-17726326,17726842-17726928,
17727018-17727113,17728484-17728585,17728720-17728762,
17728834-17728952,17729348-17729444,17730153-17730214,
17730370-17730432,17730847-17730949,17731402-17731497,
17731594-17731742,17732356-17732529,17733078-17733156,
17733807-17733913,17733994-17734062,17734879-17735043,
17735206-17735703
Length = 802
Score = 45.6 bits (103), Expect = 3e-05
Identities = 20/58 (34%), Positives = 36/58 (62%)
Frame = +3
Query: 363 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGRSPNGFRQTLAYILPAI 536
F E N + + + +GY++PTPIQA P+A++G+++ G + G +T A+ LP +
Sbjct: 196 FLELNLSRPLLRACEALGYQKPTPIQAACIPLALTGRDICGSAITGSGKTAAFSLPVL 253
>03_05_0997 +
29565311-29565664,29566134-29566298,29566572-29566661,
29566763-29566891,29568141-29568272,29568904-29568969,
29569326-29569505,29569664-29569693,29569744-29569839,
29569959-29570096,29571060-29571142,29571447-29571484,
29571568-29571788,29572491-29572538
Length = 589
Score = 44.8 bits (101), Expect = 5e-05
Identities = 17/58 (29%), Positives = 35/58 (60%)
Frame = +3
Query: 363 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGRSPNGFRQTLAYILPAI 536
F+E + +++ ++ G + TPIQ + P+ + GK++V ++ G +T AY+LP +
Sbjct: 85 FDELGLDEQLKRALRKKGLDKATPIQREAIPLILEGKDVVAKAKTGSGKTFAYLLPML 142
>01_07_0333 -
42813789-42814073,42814229-42814315,42815083-42815172,
42815555-42815623,42815859-42815888,42816060-42816164,
42816454-42816549,42816647-42816760,42816862-42816955,
42817027-42817190
Length = 377
Score = 44.4 bits (100), Expect = 7e-05
Identities = 20/59 (33%), Positives = 34/59 (57%)
Frame = +3
Query: 381 PDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGRSPNGFRQTLAYILPAIVHINTNR 557
P++V Q + +GY PT +Q Q P+ +SG++ + + G +TLAY+L I+ R
Sbjct: 49 PEHVLQRAEEVGYVVPTEVQEQSLPVLLSGQDCILHAQTGSGKTLAYLLSVFSAIDFGR 107
>03_05_0619 -
26180980-26181105,26181329-26181417,26181518-26181629,
26181711-26181848,26182004-26182150,26182458-26182532,
26182627-26182668,26183033-26183152,26183806-26183880,
26184051-26184113,26184690-26184759,26184877-26185006,
26185097-26185328
Length = 472
Score = 44.0 bits (99), Expect = 9e-05
Identities = 24/62 (38%), Positives = 34/62 (54%)
Frame = +3
Query: 351 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGRSPNGFRQTLAYILP 530
P + E P+ V MG+KEPT IQA+ P A+ G++L+G G +T A+ LP
Sbjct: 40 PSTFAELGVVPELVA-ACDAMGWKEPTRIQAEAIPHALEGRDLIGLGQTGSGKTGAFALP 98
Query: 531 AI 536
I
Sbjct: 99 II 100
>07_03_0601 -
19872780-19873099,19873148-19873151,19874196-19874357,
19874429-19874617,19874687-19875010,19875103-19875378,
19875436-19875478,19876110-19876188,19876473-19876555,
19876708-19876782,19877324-19877490,19877960-19878370
Length = 710
Score = 43.2 bits (97), Expect = 2e-04
Identities = 19/66 (28%), Positives = 37/66 (56%)
Frame = +3
Query: 363 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGRSPNGFRQTLAYILPAIVH 542
F+E + + G++ GY E + IQ P A+ G++++G + G +TLA+++P ++
Sbjct: 82 FDELPLSNKTKDGLRKAGYTEMSEIQRAALPHALCGRDVLGAAKTGSGKTLAFVIPVLMS 141
Query: 543 INTNRL 560
T L
Sbjct: 142 AATLNL 147
>04_04_0476 -
25508952-25509004,25509245-25509326,25509453-25509611,
25509702-25509767,25509898-25510067,25510172-25510262,
25510331-25510410,25510887-25511003,25511092-25511218,
25511685-25511865,25511978-25512366,25512959-25513135,
25513306-25513500,25513844-25514031,25514192-25514500,
25514592-25514637
Length = 809
Score = 42.7 bits (96), Expect = 2e-04
Identities = 20/46 (43%), Positives = 31/46 (67%), Gaps = 1/46 (2%)
Frame = +3
Query: 402 VKTMGYKEPTPIQAQGWPIAM-SGKNLVGRSPNGFRQTLAYILPAI 536
V+ +G+KEPTPIQ +P A GK+++G + G +TLA+ LP +
Sbjct: 157 VRRLGFKEPTPIQKACFPAAAHQGKDVIGAAETGSGKTLAFGLPIL 202
>03_06_0344 -
33276366-33276548,33277044-33277169,33277254-33277322,
33277401-33277505,33277595-33277633,33277717-33278016,
33278093-33278182,33278271-33278312,33278433-33278516,
33278762-33278947,33279218-33279403,33279663-33280025
Length = 590
Score = 42.3 bits (95), Expect = 3e-04
Identities = 19/58 (32%), Positives = 34/58 (58%)
Frame = +3
Query: 363 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGRSPNGFRQTLAYILPAI 536
F E + + ++ M Y T IQA+ P ++GK+++G + G +TLA+++PAI
Sbjct: 98 FSELGVSEPTARAIREMNYTYLTQIQARSIPHLLNGKDVMGAAKTGSGKTLAFLIPAI 155
>01_05_0721 +
24594815-24594834,24595207-24595313,24595417-24595472,
24595562-24595810,24595871-24596077,24596157-24596243,
24596331-24596426,24596500-24596715,24596908-24597090,
24597222-24597449
Length = 482
Score = 41.5 bits (93), Expect = 5e-04
Identities = 17/58 (29%), Positives = 33/58 (56%)
Frame = +3
Query: 363 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGRSPNGFRQTLAYILPAI 536
F++ + VK GY+ T +Q P+ + GK+++ ++ G +T+A++LPAI
Sbjct: 8 FDQCTISPLSLKAVKDAGYERMTQVQEATLPVILQGKDVLAKAKTGTGKTVAFLLPAI 65
>07_03_1566 +
27766336-27766393,27766480-27766609,27766728-27766797,
27767134-27767196,27767741-27767815,27768035-27768154,
27768508-27768549,27768651-27768725,27768909-27769055,
27769165-27769302,27769448-27769562,27769658-27769746,
27770062-27770184
Length = 414
Score = 40.7 bits (91), Expect = 9e-04
Identities = 18/42 (42%), Positives = 27/42 (64%)
Frame = +3
Query: 411 MGYKEPTPIQAQGWPIAMSGKNLVGRSPNGFRQTLAYILPAI 536
MG+K PT IQA+ P A+ G++++G G +T A+ LP I
Sbjct: 1 MGWKAPTRIQAEVIPFALQGRDVIGVGQTGSGKTAAFALPII 42
>01_05_0722 +
24598426-24598649,24599113-24599219,24599319-24599374,
24599469-24599675,24599757-24599963,24600037-24600123,
24600167-24600208,24600209-24600304,24600406-24600621,
24600693-24600875,24601014-24601241
Length = 550
Score = 40.3 bits (90), Expect = 0.001
Identities = 16/52 (30%), Positives = 34/52 (65%)
Frame = +3
Query: 396 QGVKTMGYKEPTPIQAQGWPIAMSGKNLVGRSPNGFRQTLAYILPAIVHINT 551
+ +K GY++ T +Q PI + G++++ ++ G +T+A++LPAI ++T
Sbjct: 87 KAIKDAGYEKMTQVQEATLPIILQGEDVLAKAKTGTGKTVAFLLPAIELLST 138
>06_03_0337 +
19678152-19678484,19678616-19678801,19679232-19679417,
19680840-19680926,19681045-19681086,19681164-19681253,
19681399-19681503,19681797-19681835,19681914-19682018,
19682463-19682531,19682587-19682736,19683156-19683335
Length = 523
Score = 39.1 bits (87), Expect = 0.003
Identities = 18/58 (31%), Positives = 30/58 (51%)
Frame = +3
Query: 363 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGRSPNGFRQTLAYILPAI 536
F + D ++ M Y T IQA+ P M G +++ + G +TLA+++PAI
Sbjct: 88 FSDLPISDLTANAIRDMNYTHLTEIQARSIPPLMLGSDVMASAKTGSGKTLAFLIPAI 145
>03_01_0059 +
484305-484617,484919-485406,485608-486092,486185-486461,
486495-486626,486721-486893,486982-487204
Length = 696
Score = 39.1 bits (87), Expect = 0.003
Identities = 17/68 (25%), Positives = 35/68 (51%)
Frame = +3
Query: 363 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGRSPNGFRQTLAYILPAIVH 542
F+E D + +++ G+ P+ IQA + + GK+ + +G +TLAY+ P + +
Sbjct: 242 FKEIGCSDEILGALRSFGFPRPSHIQAMAYRPVLEGKSCIIGDQSGSGKTLAYLCPVVQN 301
Query: 543 INTNRLFG 566
+ + G
Sbjct: 302 LRKEEVEG 309
>02_05_1293 -
35520733-35520963,35521696-35521878,35522040-35522255,
35522936-35523022,35523125-35523331,35523426-35523650,
35523743-35523798,35524009-35524115,35524443-35525470
Length = 779
Score = 37.5 bits (83), Expect = 0.008
Identities = 16/58 (27%), Positives = 31/58 (53%)
Frame = +3
Query: 363 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGRSPNGFRQTLAYILPAI 536
FEE + + GY + T +Q P+ + GK+++ ++ G ++ A++LPAI
Sbjct: 344 FEECGISPLTVKALTDAGYVQTTVVQETALPMCLEGKDVLVKAKTGTGKSAAFLLPAI 401
>03_02_0189 - 6253659-6255380
Length = 573
Score = 36.7 bits (81), Expect = 0.014
Identities = 20/61 (32%), Positives = 29/61 (47%)
Frame = +3
Query: 363 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGRSPNGFRQTLAYILPAIVH 542
FEE P + + G PT +Q+ PI + V +S G +TLAY+LP +
Sbjct: 133 FEELGLPPLLIDRLNKEGLSTPTEVQSAAIPIISQKHDAVIQSYTGSGKTLAYLLPILSE 192
Query: 543 I 545
I
Sbjct: 193 I 193
>02_05_0064 -
25529630-25531440,25531663-25531673,25533113-25533198,
25533412-25534259,25535385-25535736
Length = 1035
Score = 36.3 bits (80), Expect = 0.019
Identities = 20/61 (32%), Positives = 29/61 (47%)
Frame = +3
Query: 363 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGRSPNGFRQTLAYILPAIVH 542
FEE P + + G PT +Q+ PI + V +S G +TLAY+LP +
Sbjct: 595 FEELGLPPLLIDRLNKEGLTAPTEVQSAAIPIISQKHDAVIQSYTGSGKTLAYLLPILSE 654
Query: 543 I 545
I
Sbjct: 655 I 655
>01_01_0447 -
3327727-3328144,3328438-3328688,3328820-3328909,
3329061-3329159,3329240-3329353,3329450-3329555,
3329661-3329740,3329913-3330173,3330271-3330507,
3330635-3330922
Length = 647
Score = 35.9 bits (79), Expect = 0.025
Identities = 15/49 (30%), Positives = 30/49 (61%)
Frame = +3
Query: 390 VQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGRSPNGFRQTLAYILPAI 536
V + +K G++ TP+QA P+ +S K++ + G +TLA+++P +
Sbjct: 34 VVKALKGGGFRRCTPVQAAAIPLLLSHKDVAVDAATGSGKTLAFVVPVV 82
>12_02_1076 -
25862671-25863159,25863290-25863451,25863614-25863838,
25863939-25864037,25864584-25864992,25865094-25865221,
25865955-25866329
Length = 628
Score = 32.7 bits (71), Expect = 0.23
Identities = 19/52 (36%), Positives = 29/52 (55%)
Frame = +3
Query: 381 PDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGRSPNGFRQTLAYILPAI 536
P V Q + + G + PIQ AM GK++VGR+ G +TLA+ +P +
Sbjct: 107 PKIVSQ-LASRGITKLFPIQRAVLEPAMQGKDMVGRAKTGTGKTLAFGIPIL 157
>05_07_0301 + 29087014-29088349,29088507-29088645,29090350-29091001
Length = 708
Score = 29.1 bits (62), Expect = 2.8
Identities = 15/46 (32%), Positives = 24/46 (52%)
Frame = +3
Query: 456 IAMSGKNLVGRSPNGFRQTLAYILPAIVHINTNRLFGEVMAXCFGL 593
+ + G L+GR P G L + ++ + +NRLFG+V F L
Sbjct: 68 LRLPGVGLIGRVPQGTLGALRGL--RVLSLRSNRLFGDVPGDLFSL 111
>05_01_0372 - 2913518-2916562,2916674-2917528
Length = 1299
Score = 29.1 bits (62), Expect = 2.8
Identities = 26/104 (25%), Positives = 41/104 (39%), Gaps = 2/104 (1%)
Frame = +3
Query: 222 CFTPTFQQKLLDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEE--ANFPDYVQ 395
C PT++ + L+P TVL R + + H+ GV V + + AN V
Sbjct: 1039 CDNPTYRYRFLEPTSTVLARPVLDAHGW--DHDCGYDGVSVEETLALLNKFPANMAVQVT 1096
Query: 396 QGVKTMGYKEPTPIQAQGWPIAMSGKNLVGRSPNGFRQTLAYIL 527
+ K + I A+ + +L G + LAYIL
Sbjct: 1097 KDKKEFSIHLDSSISAK---LGEDASSLAGFDIQTVGRQLAYIL 1137
>07_01_0322 -
2258067-2258519,2258620-2258781,2258896-2259159,
2259196-2259294,2259723-2260131,2260223-2260350,
2261115-2261181,2262766-2262838,2262911-2263130
Length = 624
Score = 28.7 bits (61), Expect = 3.7
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = +3
Query: 459 AMSGKNLVGRSPNGFRQTLAYILPAIVHI 545
AM GK+++GR+ G +TLA+ +P + I
Sbjct: 127 AMQGKDMIGRARTGTGKTLAFGIPIMDRI 155
>04_01_0520 - 6852701-6855028,6855050-6855835,6856085-6856093
Length = 1040
Score = 28.7 bits (61), Expect = 3.7
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +3
Query: 249 LLDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHN 350
+LD T SP +EE N E+ V GV++HN
Sbjct: 420 VLDLQYTQWVFSPQMIEEMNNVRELNVKGVKLHN 453
>03_05_0712 - 27057858-27057941,27058093-27058182,27058268-27058384,
27059759-27059866,27060314-27060406,27060499-27060669,
27061505-27061757,27061860-27062138,27062939-27063273,
27063364-27064332,27064711-27065182,27065243-27065291,
27066564-27066804,27067606-27067695,27068172-27068294,
27068365-27068418
Length = 1175
Score = 28.3 bits (60), Expect = 4.9
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +3
Query: 213 LGFCFTPTFQQKLLDPHPTVLKRSPYEVEEYRN 311
L +CF+P F QKLL + + + S + E YR+
Sbjct: 918 LDYCFSPVFVQKLLGRYSFLDELSTLDSELYRS 950
>12_02_0709 -
22359705-22360292,22360396-22360560,22360650-22361157,
22361159-22361577,22362261-22362722,22362853-22364415
Length = 1234
Score = 27.5 bits (58), Expect = 8.6
Identities = 14/45 (31%), Positives = 21/45 (46%)
Frame = -3
Query: 341 LNATYSYLVFISILFDFIW*SFENCRMWI*KFLLKGWSETESQSG 207
LN YS +F +LF + W S+ + I K K W ++ G
Sbjct: 77 LNVLYSLALFQGVLFFYQWVSYFAGKRLIEKVASKYWQNSKEAGG 121
>11_06_0691 -
26315738-26315848,26315939-26316163,26316249-26316602,
26316681-26316795,26316882-26316925,26317026-26317122,
26317243-26317406,26317499-26317726,26317903-26318222,
26320028-26320136
Length = 588
Score = 27.5 bits (58), Expect = 8.6
Identities = 25/108 (23%), Positives = 42/108 (38%)
Frame = +3
Query: 219 FCFTPTFQQKLLDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQ 398
F F+ + L+ H + +V N+ E + S + Y + + D
Sbjct: 119 FGFSSDDDFETLESHCDRSVSTQKKVNRGNNRCESSTS-TSNRETLSYQQLYSLDDINFA 177
Query: 399 GVKTMGYKEPTPIQAQGWPIAMSGKNLVGRSPNGFRQTLAYILPAIVH 542
V G K P+Q + A+S + P G ++L Y LPA +H
Sbjct: 178 NVVIFGNKSFRPLQYEACRAAVSNMDTFVLMPTGGGKSLCYQLPATLH 225
>08_02_0293 - 15424397-15428041
Length = 1214
Score = 27.5 bits (58), Expect = 8.6
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = +3
Query: 456 IAMSGKNLVGRSPNGFRQTLAYILPAIVHINTNRLFGEVMA 578
++++G NL G P+GF AI+ +N N L G+V A
Sbjct: 555 LSLAGNNLTGSIPSGFGNLQNL---AILQLNKNSLSGKVPA 592
>04_03_0399 - 15414405-15416717,15416739-15417524,15417776-15417784
Length = 1035
Score = 27.5 bits (58), Expect = 8.6
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = +3
Query: 249 LLDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHN 350
+LD T SP +EE N E+ V GV+ HN
Sbjct: 420 VLDLQYTQWVFSPQMIEEMNNVRELNVEGVKPHN 453
>02_05_1067 -
33858215-33858321,33858422-33858527,33859014-33859218,
33859463-33859650,33859780-33859957,33860201-33860298,
33860619-33860873,33861002-33861236,33861846-33861973
Length = 499
Score = 27.5 bits (58), Expect = 8.6
Identities = 17/58 (29%), Positives = 29/58 (50%), Gaps = 5/58 (8%)
Frame = +3
Query: 402 VKTMGYKEPTPIQAQGW-----PIAMSGKNLVGRSPNGFRQTLAYILPAIVHINTNRL 560
++ MG + P+Q W P A +++ SP G +TLAY LP + + T ++
Sbjct: 48 LQRMGIESFFPVQVAAWLETIGPGAFE-RDICINSPTGSGKTLAYALPIVQMLATRKV 104
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,033,125
Number of Sequences: 37544
Number of extensions: 310098
Number of successful extensions: 783
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 763
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 781
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1423789920
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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