Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0317.Seq
(598 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI0000E4A84B Cluster: PREDICTED: similar to valosin; n... 106 3e-22
UniRef50_P55072 Cluster: Transitional endoplasmic reticulum ATPa... 106 5e-22
UniRef50_A4ICJ9 Cluster: Transitional endoplasmic reticulum ATPa... 85 2e-15
UniRef50_Q4Y788 Cluster: Cell division cycle protein 48 homologu... 74 2e-12
UniRef50_A0EEE7 Cluster: Chromosome undetermined scaffold_91, wh... 58 1e-07
UniRef50_A5KAB5 Cluster: Cell division cycle ATPase, putative; n... 44 0.003
UniRef50_Q4YQQ6 Cluster: Cell division cycle ATPase, putative; n... 40 0.044
UniRef50_Q7QWL6 Cluster: GLP_762_31096_33708; n=1; Giardia lambl... 40 0.059
UniRef50_Q2JV80 Cluster: Putative uncharacterized protein; n=1; ... 33 3.9
UniRef50_Q54M76 Cluster: WD-40 repeat-containing protein; n=1; D... 33 6.7
UniRef50_Q4MZM6 Cluster: Cell division cycle protein 48, putativ... 33 6.7
UniRef50_Q1JSD1 Cluster: Transitional endoplasmic reticulum ATPa... 33 6.7
UniRef50_A7Q467 Cluster: Chromosome chr9 scaffold_49, whole geno... 32 8.9
UniRef50_Q7RPC2 Cluster: Putative uncharacterized protein PY0153... 32 8.9
>UniRef50_UPI0000E4A84B Cluster: PREDICTED: similar to valosin; n=3;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
valosin - Strongylocentrotus purpuratus
Length = 596
Score = 106 bits (255), Expect = 3e-22
Identities = 49/68 (72%), Positives = 64/68 (94%)
Frame = +1
Query: 52 MADNKSPDDLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGK 231
MA+N S DD++TAILR K +PNRL+VEEA++DDNSVV+LSQAKM++LQLFRGDTV+LKGK
Sbjct: 1 MAEN-SGDDIATAILRTKAKPNRLVVEEAINDDNSVVSLSQAKMDELQLFRGDTVMLKGK 59
Query: 232 RRKETVCM 255
+R++TVC+
Sbjct: 60 KRRDTVCI 67
Score = 39.1 bits (87), Expect = 0.078
Identities = 15/28 (53%), Positives = 18/28 (64%)
Frame = +3
Query: 456 PYFMEAYRPIHRDDTFMVGGACAPVEFK 539
PYF EAYRP+ + D F + G VEFK
Sbjct: 107 PYFQEAYRPVRKGDIFQIRGGMRAVEFK 134
Score = 38.7 bits (86), Expect = 0.10
Identities = 17/28 (60%), Positives = 19/28 (67%)
Frame = +1
Query: 514 GHARPSSSKVVETDPSPFCIVASDTGIH 597
G R KVVETDP P+CIV+ DT IH
Sbjct: 126 GGMRAVEFKVVETDPGPYCIVSPDTVIH 153
>UniRef50_P55072 Cluster: Transitional endoplasmic reticulum ATPase
(TER ATPase) (15S Mg(2+)- ATPase p97 subunit); n=169;
Eukaryota|Rep: Transitional endoplasmic reticulum ATPase
(TER ATPase) (15S Mg(2+)- ATPase p97 subunit) - Homo
sapiens (Human)
Length = 806
Score = 106 bits (254), Expect = 5e-22
Identities = 50/95 (52%), Positives = 60/95 (63%)
Frame = +3
Query: 255 VLSDDNCPDEKIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHILPIDDSS*GVLLAI 434
VLSDD C DEKIRM DV+SI PCP VKYGKR+H+LPIDD+ G+ +
Sbjct: 71 VLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPIDDTVEGITGNL 130
Query: 435 YSKYT*SPYFMEAYRPIHRDDTFMVGGACAPVEFK 539
+ Y PYF+EAYRPI + D F+V G VEFK
Sbjct: 131 FEVYL-KPYFLEAYRPIRKGDIFLVRGGMRAVEFK 164
Score = 105 bits (251), Expect = 1e-21
Identities = 49/67 (73%), Positives = 63/67 (94%)
Frame = +1
Query: 55 ADNKSPDDLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKR 234
AD+K DDLSTAIL++K+RPNRLIV+EA+++DNSVV+LSQ KM++LQLFRGDTVLLKGK+
Sbjct: 5 ADSKG-DDLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLKGKK 63
Query: 235 RKETVCM 255
R+E VC+
Sbjct: 64 RREAVCI 70
Score = 41.5 bits (93), Expect = 0.015
Identities = 19/28 (67%), Positives = 20/28 (71%)
Frame = +1
Query: 514 GHARPSSSKVVETDPSPFCIVASDTGIH 597
G R KVVETDPSP+CIVA DT IH
Sbjct: 156 GGMRAVEFKVVETDPSPYCIVAPDTVIH 183
>UniRef50_A4ICJ9 Cluster: Transitional endoplasmic reticulum ATPase,
putative; n=2; Leishmania|Rep: Transitional endoplasmic
reticulum ATPase, putative - Leishmania infantum
Length = 690
Score = 84.6 bits (200), Expect = 2e-15
Identities = 38/94 (40%), Positives = 53/94 (56%)
Frame = +3
Query: 258 LSDDNCPDEKIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHILPIDDSS*GVLLAIY 437
+ DD CP EKI+M D + I PC V YG RVH+LPIDD+ + ++
Sbjct: 63 MEDDECPPEKIKMNKVARRNIRIHLGDTIRIVPCKDVPYGNRVHLLPIDDTVENLTGDLF 122
Query: 438 SKYT*SPYFMEAYRPIHRDDTFMVGGACAPVEFK 539
+ PYF+E+YRP+ + D+F+ GA VEFK
Sbjct: 123 ENFL-KPYFLESYRPVKKGDSFVCRGAMRSVEFK 155
Score = 68.9 bits (161), Expect = 8e-11
Identities = 30/54 (55%), Positives = 43/54 (79%)
Frame = +1
Query: 103 KDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKRRKETVCMCSQ 264
K + N+LIVEE +DDNSVV+L+ +ME+L +FRGDTVL+KGK+ + TVC+ +
Sbjct: 11 KVKLNKLIVEEPYNDDNSVVSLNPKRMEELNIFRGDTVLVKGKKHRSTVCIAME 64
Score = 33.1 bits (72), Expect = 5.1
Identities = 15/28 (53%), Positives = 17/28 (60%)
Frame = +1
Query: 514 GHARPSSSKVVETDPSPFCIVASDTGIH 597
G R KVVE DP +CIV+ DT IH
Sbjct: 147 GAMRSVEFKVVEVDPGDYCIVSPDTIIH 174
>UniRef50_Q4Y788 Cluster: Cell division cycle protein 48 homologue,
putative; n=4; Plasmodium|Rep: Cell division cycle
protein 48 homologue, putative - Plasmodium chabaudi
Length = 250
Score = 74.1 bits (174), Expect = 2e-12
Identities = 35/66 (53%), Positives = 47/66 (71%)
Frame = +1
Query: 58 DNKSPDDLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKRR 237
D K+ D + L +K RLIVEEA +DDNSVVAL+ +ME+L FRGDT+L+KGK+R
Sbjct: 6 DTKTLGDDNNGKLPKKKNLCRLIVEEATNDDNSVVALNTKRMEELNFFRGDTILIKGKKR 65
Query: 238 KETVCM 255
T+C+
Sbjct: 66 HSTICI 71
Score = 72.5 bits (170), Expect = 7e-12
Identities = 33/95 (34%), Positives = 52/95 (54%)
Frame = +3
Query: 255 VLSDDNCPDEKIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHILPIDDSS*GVLLAI 434
+L+D++ + KIR+ D+V + CP + YGK++ +LPIDD+ G+
Sbjct: 72 ILNDNDLDEGKIRINKVARKNLRVCLGDIVYVKACPEIPYGKKIQVLPIDDTIEGLAKDT 131
Query: 435 YSKYT*SPYFMEAYRPIHRDDTFMVGGACAPVEFK 539
+ PYF E+YRP+ + D F+V G VEFK
Sbjct: 132 LFEIFLKPYFNESYRPVKKGDLFLVRGGFMSVEFK 166
>UniRef50_A0EEE7 Cluster: Chromosome undetermined scaffold_91, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_91,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 772
Score = 58.4 bits (135), Expect = 1e-07
Identities = 27/47 (57%), Positives = 37/47 (78%)
Frame = +1
Query: 115 NRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKRRKETVCM 255
NRL+V E+ +DDNSVV L Q K+ +L+LF+GD VLL+GK K+TV +
Sbjct: 17 NRLMVCESTADDNSVVQLCQDKLNELKLFKGDMVLLEGKNNKKTVAI 63
Score = 47.2 bits (107), Expect = 3e-04
Identities = 28/86 (32%), Positives = 41/86 (47%)
Frame = +3
Query: 282 EKIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHILPIDDSS*GVLLAIYSKYT*SPY 461
E + M D ++I P S+ +VHILP DS G ++ PY
Sbjct: 72 ESVHMNSVIRKNLGIQIGDFITIQPTASLPQLTKVHILPFQDSISGTNEKNLTQNYLIPY 131
Query: 462 FMEAYRPIHRDDTFMVGGACAPVEFK 539
F++AYRP+ + D F+V A +EFK
Sbjct: 132 FLDAYRPVSKGDCFVVKMA-KEIEFK 156
>UniRef50_A5KAB5 Cluster: Cell division cycle ATPase, putative; n=1;
Plasmodium vivax|Rep: Cell division cycle ATPase,
putative - Plasmodium vivax
Length = 1089
Score = 44.0 bits (99), Expect = 0.003
Identities = 23/49 (46%), Positives = 32/49 (65%), Gaps = 1/49 (2%)
Frame = +1
Query: 112 PNRLIVEEAVSD-DNSVVALSQAKMEQLQLFRGDTVLLKGKRRKETVCM 255
P+ +VE DN + LS+AKME+L L G TVLLKGK++KE + +
Sbjct: 270 PSYCLVENVDEQIDNCEIYLSKAKMEELNLSEGFTVLLKGKKKKEMLAI 318
>UniRef50_Q4YQQ6 Cluster: Cell division cycle ATPase, putative; n=3;
Plasmodium (Vinckeia)|Rep: Cell division cycle ATPase,
putative - Plasmodium berghei
Length = 932
Score = 39.9 bits (89), Expect = 0.044
Identities = 21/49 (42%), Positives = 32/49 (65%), Gaps = 1/49 (2%)
Frame = +1
Query: 112 PNRLIVEEAVSD-DNSVVALSQAKMEQLQLFRGDTVLLKGKRRKETVCM 255
PN +VE + DN + +S+ KM++L + G TVLLKGK++KE V +
Sbjct: 101 PNYCLVENIDENADNFDIYMSKEKMKELNINDGFTVLLKGKKKKEMVAI 149
>UniRef50_Q7QWL6 Cluster: GLP_762_31096_33708; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_762_31096_33708 - Giardia lamblia
ATCC 50803
Length = 870
Score = 39.5 bits (88), Expect = 0.059
Identities = 21/47 (44%), Positives = 27/47 (57%)
Frame = +1
Query: 115 NRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKRRKETVCM 255
NR IV + D+S + LS K+ L LF+GD V LKG+ K T M
Sbjct: 12 NRFIVNDNPGGDDSQIILSSEKVNVLDLFQGDYVRLKGRFGKTTHAM 58
Score = 27.1 bits (57), Expect(2) = 7.2
Identities = 10/35 (28%), Positives = 21/35 (60%)
Frame = +3
Query: 336 DVVSIAPCPSVKYGKRVHILPIDDSS*GVLLAIYS 440
D+V + P ++ Y KR+ ++P + G+ +A Y+
Sbjct: 86 DIVILYPAQNLPYHKRIKVIPFEQDLEGLNIAGYT 120
Score = 24.2 bits (50), Expect(2) = 7.2
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +3
Query: 453 SPYFMEAYRPIHRDDTFMVGGACAPV 530
+PYF + RP+ +TF V PV
Sbjct: 147 APYFKDKCRPVTEGNTFKVMTTSLPV 172
>UniRef50_Q2JV80 Cluster: Putative uncharacterized protein; n=1;
Synechococcus sp. JA-3-3Ab|Rep: Putative uncharacterized
protein - Synechococcus sp. (strain JA-3-3Ab)
(Cyanobacteria bacteriumYellowstone A-Prime)
Length = 650
Score = 33.5 bits (73), Expect = 3.9
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = +1
Query: 391 YCQLMIQVEGSYWQSIRSILEARTSWRLTVRSIVTTPSWSG 513
Y +Q + +W I + L +R+ WR+ S V TP W G
Sbjct: 547 YINRGLQADYQFWFDITNPLWSRSLWRVLYNSRVLTPEWDG 587
>UniRef50_Q54M76 Cluster: WD-40 repeat-containing protein; n=1;
Dictyostelium discoideum AX4|Rep: WD-40
repeat-containing protein - Dictyostelium discoideum AX4
Length = 469
Score = 32.7 bits (71), Expect = 6.7
Identities = 14/43 (32%), Positives = 21/43 (48%)
Frame = -2
Query: 369 SLKDTELWIPHQKDAHEGCFSRHGSSEFSHQGNYHLRAHANGF 241
+ K + W PH CFS S+ FS +Y+ ++H GF
Sbjct: 395 TFKPLDKWEPHDFVVTGACFSPDNSTIFSSSADYNCKSHRIGF 437
>UniRef50_Q4MZM6 Cluster: Cell division cycle protein 48, putative;
n=1; Theileria parva|Rep: Cell division cycle protein
48, putative - Theileria parva
Length = 954
Score = 32.7 bits (71), Expect = 6.7
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = +1
Query: 145 DDNSVVALSQAKMEQLQLFRGDTVLLKGKRRKETVC 252
+ N V + +A+ +L + GD + +KG+RRK TVC
Sbjct: 154 NSNVNVRIGKAQANKLSVMPGDLLKVKGRRRKVTVC 189
>UniRef50_Q1JSD1 Cluster: Transitional endoplasmic reticulum ATPase;
n=1; Toxoplasma gondii|Rep: Transitional endoplasmic
reticulum ATPase - Toxoplasma gondii
Length = 792
Score = 32.7 bits (71), Expect = 6.7
Identities = 14/25 (56%), Positives = 19/25 (76%)
Frame = +1
Query: 181 MEQLQLFRGDTVLLKGKRRKETVCM 255
M LQ+ RGD VLL G+R++ETV +
Sbjct: 1 MAALQVQRGDVVLLSGRRKRETVAI 25
>UniRef50_A7Q467 Cluster: Chromosome chr9 scaffold_49, whole genome
shotgun sequence; n=24; Vitis vinifera|Rep: Chromosome
chr9 scaffold_49, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 244
Score = 32.3 bits (70), Expect = 8.9
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = -2
Query: 336 QKDAHEGCFSRHGSSEFSHQGNYHLRAHANGFLAAFAFEQ 217
+KD H+ E SHQG Y HA+ FL++FA+++
Sbjct: 203 KKDDHDSSVDEE-PREDSHQGRYDEETHASTFLSSFAWQK 241
>UniRef50_Q7RPC2 Cluster: Putative uncharacterized protein PY01537;
n=2; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
protein PY01537 - Plasmodium yoelii yoelii
Length = 1022
Score = 32.3 bits (70), Expect = 8.9
Identities = 20/71 (28%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Frame = -2
Query: 456 GFKYTSNRLPVRPLNLNHQLAVCGLVFHISLKDTELWIPHQKDAHEGC-FSRHGSSEFSH 280
GFKY + P+N N + V G + H++ K+ + + + H G + R+G+
Sbjct: 282 GFKYIDDNCYNLPIN-NIYIDVDGKI-HLTEKERNNGLGYNANVHYGNKYDRNGNYHNKE 339
Query: 279 QGNYHLRAHAN 247
GNYH + + N
Sbjct: 340 NGNYHNKENGN 350
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 638,277,538
Number of Sequences: 1657284
Number of extensions: 12934928
Number of successful extensions: 34450
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 33252
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34440
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 41902926763
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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