Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0317.Seq
         (598 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY345586-1|AAR09143.1|  427|Anopheles gambiae myosuppressin rece...    25   1.4  
AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript...    25   1.9  
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           23   5.7  
U89799-1|AAD03792.1|  332|Anopheles gambiae Tc1-like transposase...    23   7.5  
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    23   7.5  
AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/T...    23   9.9  
AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/T...    23   9.9  

>AY345586-1|AAR09143.1|  427|Anopheles gambiae myosuppressin
           receptor protein.
          Length = 427

 Score = 25.4 bits (53), Expect = 1.4
 Identities = 14/42 (33%), Positives = 22/42 (52%), Gaps = 3/42 (7%)
 Frame = -3

Query: 554 SVSTTFEL---DGRACPPDHEGVVTMDRTVSLHEVRASSILR 438
           S+ +  EL   DG    PD  G V+  R V+L+ +  S ++R
Sbjct: 198 SIQSNVELLGCDGNTLTPDAIGNVSQGRNVTLYRLGTSQLVR 239


>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1099

 Score = 25.0 bits (52), Expect = 1.9
 Identities = 9/29 (31%), Positives = 17/29 (58%)
 Frame = +2

Query: 77  IYRPRSSVARTDPTVSLSKKQSAMTTQSW 163
           +Y+  S+V RTD   ++ K++   T + W
Sbjct: 849 VYQRLSAVNRTDTRANIRKQERQATIEQW 877


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 23.4 bits (48), Expect = 5.7
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -2

Query: 282 HQGNYHLRAHANG 244
           HQG +H + H+NG
Sbjct: 655 HQGQHHAQHHSNG 667


>U89799-1|AAD03792.1|  332|Anopheles gambiae Tc1-like transposase
           protein.
          Length = 332

 Score = 23.0 bits (47), Expect = 7.5
 Identities = 12/24 (50%), Positives = 13/24 (54%)
 Frame = +2

Query: 494 RHLHGRGGMRARRVQKWSKQIHHH 565
           R LH   G  ARR +K  K  HHH
Sbjct: 96  RRLHA-AGFCARRPRKVRKLQHHH 118


>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
            transcriptase protein.
          Length = 1049

 Score = 23.0 bits (47), Expect = 7.5
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = +2

Query: 65   KVLMIYRPRSSVARTDPTVSLS 130
            + L + +PRSS  R+DP   +S
Sbjct: 998  ETLRLAQPRSSAGRSDPMFRMS 1019


>AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/Thr
           phosphatase protein.
          Length = 1977

 Score = 22.6 bits (46), Expect = 9.9
 Identities = 9/16 (56%), Positives = 13/16 (81%)
 Frame = +1

Query: 502 SWSGGHARPSSSKVVE 549
           SW GGH +PS+S+V +
Sbjct: 584 SW-GGHNQPSASEVAD 598


>AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/Thr
           phosphatase protein.
          Length = 1978

 Score = 22.6 bits (46), Expect = 9.9
 Identities = 9/16 (56%), Positives = 13/16 (81%)
 Frame = +1

Query: 502 SWSGGHARPSSSKVVE 549
           SW GGH +PS+S+V +
Sbjct: 584 SW-GGHNQPSASEVAD 598


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 665,684
Number of Sequences: 2352
Number of extensions: 13394
Number of successful extensions: 20
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 57609459
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)