Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0316.Seq
(459 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AM292369-1|CAL23181.1| 408|Tribolium castaneum gustatory recept... 25 0.26
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr... 23 1.4
AJ307577-1|CAC84070.1| 301|Tribolium castaneum dachshund protein. 21 7.3
EF222292-1|ABN79652.1| 354|Tribolium castaneum cardioactive pep... 20 9.6
AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax pr... 20 9.6
AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax pr... 20 9.6
AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax pr... 20 9.6
AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax pr... 20 9.6
AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax pr... 20 9.6
AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax pr... 20 9.6
AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein. 20 9.6
AF261823-1|AAG13010.1| 157|Tribolium castaneum cephalothorax pr... 20 9.6
AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduce... 20 9.6
>AM292369-1|CAL23181.1| 408|Tribolium castaneum gustatory receptor
candidate 48 protein.
Length = 408
Score = 25.4 bits (53), Expect = 0.26
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = +3
Query: 12 IVILLKKLNKKYFHQHVVFIV*YCI 86
+V + KK+NK Y HQ ++ I+ Y I
Sbjct: 221 LVFMCKKINKLYGHQLLLTILTYLI 245
>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
protein protein.
Length = 1156
Score = 23.0 bits (47), Expect = 1.4
Identities = 12/34 (35%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = +2
Query: 245 QHISLVVRQRNVLEL-SVDDGRGLELGSGFGHLQ 343
QH + ++ Q ++ S DD +G GSG G+ Q
Sbjct: 502 QHYTNIISQEQIISWRSSDDAKGGGGGSGSGNNQ 535
>AJ307577-1|CAC84070.1| 301|Tribolium castaneum dachshund protein.
Length = 301
Score = 20.6 bits (41), Expect = 7.3
Identities = 7/20 (35%), Positives = 13/20 (65%)
Frame = -1
Query: 456 ANWVPGPPSRSTVSISLISN 397
++W PP R+ V +SL ++
Sbjct: 35 SSWPGRPPKRAPVGLSLAAS 54
>EF222292-1|ABN79652.1| 354|Tribolium castaneum cardioactive
peptide receptor 2 protein.
Length = 354
Score = 20.2 bits (40), Expect = 9.6
Identities = 6/23 (26%), Positives = 15/23 (65%)
Frame = +3
Query: 276 MSLNSPLTTAVALNWGAGLVICR 344
+S+++ + + + W AG V+C+
Sbjct: 98 ISVSTDIAWRITVAWYAGNVLCK 120
>AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 20.2 bits (40), Expect = 9.6
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = -1
Query: 441 GPPSRSTVSISLISNSRPXSS 379
G P RST +S SNS S
Sbjct: 120 GAPPRSTPPLSTPSNSNATKS 140
>AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 20.2 bits (40), Expect = 9.6
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = -1
Query: 441 GPPSRSTVSISLISNSRPXSS 379
G P RST +S SNS S
Sbjct: 120 GAPPRSTPPLSTPSNSNATKS 140
>AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax
protein.
Length = 230
Score = 20.2 bits (40), Expect = 9.6
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = -1
Query: 441 GPPSRSTVSISLISNSRPXSS 379
G P RST +S SNS S
Sbjct: 120 GAPPRSTPPLSTPSNSNATKS 140
>AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 20.2 bits (40), Expect = 9.6
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = -1
Query: 441 GPPSRSTVSISLISNSRPXSS 379
G P RST +S SNS S
Sbjct: 120 GAPPRSTPPLSTPSNSNATKS 140
>AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax
protein.
Length = 297
Score = 20.2 bits (40), Expect = 9.6
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = -1
Query: 441 GPPSRSTVSISLISNSRPXSS 379
G P RST +S SNS S
Sbjct: 120 GAPPRSTPPLSTPSNSNATKS 140
>AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax
protein.
Length = 268
Score = 20.2 bits (40), Expect = 9.6
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = -1
Query: 441 GPPSRSTVSISLISNSRPXSS 379
G P RST +S SNS S
Sbjct: 76 GAPPRSTPPLSTPSNSNATKS 96
>AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein.
Length = 312
Score = 20.2 bits (40), Expect = 9.6
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = -1
Query: 441 GPPSRSTVSISLISNSRPXSS 379
G P RST +S SNS S
Sbjct: 120 GAPPRSTPPLSTPSNSNATKS 140
>AF261823-1|AAG13010.1| 157|Tribolium castaneum cephalothorax
protein.
Length = 157
Score = 20.2 bits (40), Expect = 9.6
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = -1
Query: 441 GPPSRSTVSISLISNSRPXSS 379
G P RST +S SNS S
Sbjct: 120 GAPPRSTPPLSTPSNSNATKS 140
>AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduced
Scr protein.
Length = 312
Score = 20.2 bits (40), Expect = 9.6
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = -1
Query: 441 GPPSRSTVSISLISNSRPXSS 379
G P RST +S SNS S
Sbjct: 120 GAPPRSTPPLSTPSNSNATKS 140
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,921
Number of Sequences: 336
Number of extensions: 1407
Number of successful extensions: 13
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10511300
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
- SilkBase 1999-2023 -