Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0314.Seq
(568 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC126910-1|AAI26911.2| 1768|Homo sapiens TNS1 protein protein. 33 0.53
BC116188-1|AAI16189.1| 1713|Homo sapiens TNS1 protein protein. 33 0.53
AB209238-1|BAD92475.1| 873|Homo sapiens tensin variant protein. 33 0.53
AK075386-1|BAC11586.1| 860|Homo sapiens protein ( Homo sapiens ... 31 2.1
X04701-1|CAA28407.1| 705|Homo sapiens protein ( Human mRNA for ... 31 2.8
M14058-1|AAA51851.1| 705|Homo sapiens C1R protein. 31 2.8
BC035220-1|AAH35220.1| 705|Homo sapiens complement component 1,... 31 2.8
BC011765-1|AAH11765.1| 449|Homo sapiens chromosome 11 open read... 31 2.8
AY358754-1|AAQ89114.1| 449|Homo sapiens C11orf24 protein. 31 2.8
AF264781-1|AAG36936.1| 449|Homo sapiens DM4E3 protein. 31 2.8
AB083037-1|BAC19850.2| 705|Homo sapiens r subcomponent of compl... 31 2.8
BC042683-1|AAH42683.1| 502|Homo sapiens TTC13 protein protein. 31 3.7
AL844165-2|CAI15331.1| 806|Homo sapiens tetratricopeptide repea... 31 3.7
AL844165-1|CAI15330.1| 860|Homo sapiens tetratricopeptide repea... 31 3.7
AL591292-2|CAI17216.1| 806|Homo sapiens tetratricopeptide repea... 31 3.7
AL591292-1|CAI17217.1| 860|Homo sapiens tetratricopeptide repea... 31 3.7
AK075561-1|BAC11700.1| 806|Homo sapiens protein ( Homo sapiens ... 31 3.7
>BC126910-1|AAI26911.2| 1768|Homo sapiens TNS1 protein protein.
Length = 1768
Score = 33.5 bits (73), Expect = 0.53
Identities = 25/91 (27%), Positives = 37/91 (40%), Gaps = 3/91 (3%)
Frame = -2
Query: 405 ATSPLCTLGTKHRAPADIIDRAPLPPNRVSNETMKVVVFQRRSRET-ISHLSTPLMSPYN 229
A +PL LG K PADI+ P + V R++++ S P Y
Sbjct: 1030 AKTPLSALGLKPHNPADILLHPTGEPRSYVESVARTAVAGPRAQDSEPKSFSAPATQAYG 1089
Query: 228 AR--LESSSTGSSFPADSPKPVPLAVVSLDS 142
L + + G SF + SP ++S DS
Sbjct: 1090 HEIPLRNGTLGGSFVSPSPLSTSSPILSADS 1120
>BC116188-1|AAI16189.1| 1713|Homo sapiens TNS1 protein protein.
Length = 1713
Score = 33.5 bits (73), Expect = 0.53
Identities = 25/91 (27%), Positives = 37/91 (40%), Gaps = 3/91 (3%)
Frame = -2
Query: 405 ATSPLCTLGTKHRAPADIIDRAPLPPNRVSNETMKVVVFQRRSRET-ISHLSTPLMSPYN 229
A +PL LG K PADI+ P + V R++++ S P Y
Sbjct: 975 AKTPLSALGLKPHNPADILLHPTGEPRSYVESVARTAVAGPRAQDSEPKSFSAPATQAYG 1034
Query: 228 AR--LESSSTGSSFPADSPKPVPLAVVSLDS 142
L + + G SF + SP ++S DS
Sbjct: 1035 HEIPLRNGTLGGSFVSPSPLSTSSPILSADS 1065
>AB209238-1|BAD92475.1| 873|Homo sapiens tensin variant protein.
Length = 873
Score = 33.5 bits (73), Expect = 0.53
Identities = 25/91 (27%), Positives = 37/91 (40%), Gaps = 3/91 (3%)
Frame = -2
Query: 405 ATSPLCTLGTKHRAPADIIDRAPLPPNRVSNETMKVVVFQRRSRET-ISHLSTPLMSPYN 229
A +PL LG K PADI+ P + V R++++ S P Y
Sbjct: 135 AKTPLSALGLKPHNPADILLHPTGEPRSYVESVARTAVAGPRAQDSEPKSFSAPATQAYG 194
Query: 228 AR--LESSSTGSSFPADSPKPVPLAVVSLDS 142
L + + G SF + SP ++S DS
Sbjct: 195 HEIPLRNGTLGGSFVSPSPLSTSSPILSADS 225
>AK075386-1|BAC11586.1| 860|Homo sapiens protein ( Homo sapiens
cDNA PSEC0076 fis, clone NT2RP2003471, weakly similar to
MITOCHONDRIAL PRECURSOR PROTEINS IMPORT RECEPTOR3. ).
Length = 860
Score = 31.5 bits (68), Expect = 2.1
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = -2
Query: 369 RAPADIIDRAPLPPNRVSNETMKVVVFQRRSRETISHLSTPLMSPYN 229
+A ++ PLP + S E +KV + SR +HL TPL + YN
Sbjct: 406 KAQTKVMLNDPLPGQKASPEYLKVKYLREYSRHLHAHLDTPL-TEYN 451
>X04701-1|CAA28407.1| 705|Homo sapiens protein ( Human mRNA for
complement component C1r. ).
Length = 705
Score = 31.1 bits (67), Expect = 2.8
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = +2
Query: 113 D*RDSHCPYLLSSETTAKGTGLGESAGKEDPVELDSS 223
D + HCPY + A G +GE GK+ P +LD+S
Sbjct: 244 DHQQVHCPYD-QLQIYANGKNIGEFCGKQRPPDLDTS 279
>M14058-1|AAA51851.1| 705|Homo sapiens C1R protein.
Length = 705
Score = 31.1 bits (67), Expect = 2.8
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = +2
Query: 113 D*RDSHCPYLLSSETTAKGTGLGESAGKEDPVELDSS 223
D + HCPY + A G +GE GK+ P +LD+S
Sbjct: 244 DHQQVHCPYD-QLQIYANGKNIGEFCGKQRPPDLDTS 279
>BC035220-1|AAH35220.1| 705|Homo sapiens complement component 1, r
subcomponent protein.
Length = 705
Score = 31.1 bits (67), Expect = 2.8
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = +2
Query: 113 D*RDSHCPYLLSSETTAKGTGLGESAGKEDPVELDSS 223
D + HCPY + A G +GE GK+ P +LD+S
Sbjct: 244 DHQQVHCPYD-QLQIYANGKNIGEFCGKQRPPDLDTS 279
>BC011765-1|AAH11765.1| 449|Homo sapiens chromosome 11 open reading
frame 24 protein.
Length = 449
Score = 31.1 bits (67), Expect = 2.8
Identities = 27/116 (23%), Positives = 50/116 (43%), Gaps = 7/116 (6%)
Frame = -2
Query: 492 QMYRPSQTPRLXVSSNRITREF*TATSVSATSPLCTLGTKHRAPADIIDRAPLPPNR--- 322
Q+ + S PR + TR AT+ + +SP+ T + + +P+PP R
Sbjct: 194 QVPKSSALPRTATLATLATRAQTVATTANTSSPMSTRPSPSKHMPSDTAASPVPPMRPQA 253
Query: 321 ---VSNETMKVVVFQRRSRET-ISHLSTPLMSPYNARLESSSTGSSFPADSPKPVP 166
+S ++ V ++ T + +TP +P + ++ + P SP PVP
Sbjct: 254 QGPISQVSVDQPVVNTTNKSTPMPSNTTPEPAPTPTVVTTTKAQAREPTASPVPVP 309
>AY358754-1|AAQ89114.1| 449|Homo sapiens C11orf24 protein.
Length = 449
Score = 31.1 bits (67), Expect = 2.8
Identities = 27/116 (23%), Positives = 50/116 (43%), Gaps = 7/116 (6%)
Frame = -2
Query: 492 QMYRPSQTPRLXVSSNRITREF*TATSVSATSPLCTLGTKHRAPADIIDRAPLPPNR--- 322
Q+ + S PR + TR AT+ + +SP+ T + + +P+PP R
Sbjct: 194 QVPKSSALPRTATLATLATRAQTVATTANTSSPMSTRPSPSKHMPSDTAASPVPPMRPQA 253
Query: 321 ---VSNETMKVVVFQRRSRET-ISHLSTPLMSPYNARLESSSTGSSFPADSPKPVP 166
+S ++ V ++ T + +TP +P + ++ + P SP PVP
Sbjct: 254 QGPISQVSVDQPVVNTTNKSTPMPSNTTPEPAPTPTVVTTTKAQAREPTASPVPVP 309
>AF264781-1|AAG36936.1| 449|Homo sapiens DM4E3 protein.
Length = 449
Score = 31.1 bits (67), Expect = 2.8
Identities = 27/116 (23%), Positives = 50/116 (43%), Gaps = 7/116 (6%)
Frame = -2
Query: 492 QMYRPSQTPRLXVSSNRITREF*TATSVSATSPLCTLGTKHRAPADIIDRAPLPPNR--- 322
Q+ + S PR + TR AT+ + +SP+ T + + +P+PP R
Sbjct: 194 QVPKSSALPRTATLATLATRAQTVATTANTSSPMSTRPSPSKHMPSDTAASPVPPMRPQA 253
Query: 321 ---VSNETMKVVVFQRRSRET-ISHLSTPLMSPYNARLESSSTGSSFPADSPKPVP 166
+S ++ V ++ T + +TP +P + ++ + P SP PVP
Sbjct: 254 QGPISQVSVDQPVVNTTNKSTPMPSNTTPEPAPTPTVVTTTKAQAREPTASPVPVP 309
>AB083037-1|BAC19850.2| 705|Homo sapiens r subcomponent of
complement component 1 protein.
Length = 705
Score = 31.1 bits (67), Expect = 2.8
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = +2
Query: 113 D*RDSHCPYLLSSETTAKGTGLGESAGKEDPVELDSS 223
D + HCPY + A G +GE GK+ P +LD+S
Sbjct: 244 DHQQVHCPYD-QLQIYANGKNIGEFCGKQRPPDLDTS 279
>BC042683-1|AAH42683.1| 502|Homo sapiens TTC13 protein protein.
Length = 502
Score = 30.7 bits (66), Expect = 3.7
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = -2
Query: 369 RAPADIIDRAPLPPNRVSNETMKVVVFQRRSRETISHLSTPLMSPYN 229
+A ++ PLP + S E +KV + SR +HL TPL + YN
Sbjct: 49 KAQTKVMLNDPLPGQKASPEYLKVKYLREYSRYLHAHLDTPL-TEYN 94
>AL844165-2|CAI15331.1| 806|Homo sapiens tetratricopeptide repeat
domain 13 protein.
Length = 806
Score = 30.7 bits (66), Expect = 3.7
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = -2
Query: 369 RAPADIIDRAPLPPNRVSNETMKVVVFQRRSRETISHLSTPLMSPYN 229
+A ++ PLP + S E +KV + SR +HL TPL + YN
Sbjct: 353 KAQTKVMLNDPLPGQKASPEYLKVKYLREYSRYLHAHLDTPL-TEYN 398
>AL844165-1|CAI15330.1| 860|Homo sapiens tetratricopeptide repeat
domain 13 protein.
Length = 860
Score = 30.7 bits (66), Expect = 3.7
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = -2
Query: 369 RAPADIIDRAPLPPNRVSNETMKVVVFQRRSRETISHLSTPLMSPYN 229
+A ++ PLP + S E +KV + SR +HL TPL + YN
Sbjct: 406 KAQTKVMLNDPLPGQKASPEYLKVKYLREYSRYLHAHLDTPL-TEYN 451
>AL591292-2|CAI17216.1| 806|Homo sapiens tetratricopeptide repeat
domain 13 protein.
Length = 806
Score = 30.7 bits (66), Expect = 3.7
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = -2
Query: 369 RAPADIIDRAPLPPNRVSNETMKVVVFQRRSRETISHLSTPLMSPYN 229
+A ++ PLP + S E +KV + SR +HL TPL + YN
Sbjct: 353 KAQTKVMLNDPLPGQKASPEYLKVKYLREYSRYLHAHLDTPL-TEYN 398
>AL591292-1|CAI17217.1| 860|Homo sapiens tetratricopeptide repeat
domain 13 protein.
Length = 860
Score = 30.7 bits (66), Expect = 3.7
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = -2
Query: 369 RAPADIIDRAPLPPNRVSNETMKVVVFQRRSRETISHLSTPLMSPYN 229
+A ++ PLP + S E +KV + SR +HL TPL + YN
Sbjct: 406 KAQTKVMLNDPLPGQKASPEYLKVKYLREYSRYLHAHLDTPL-TEYN 451
>AK075561-1|BAC11700.1| 806|Homo sapiens protein ( Homo sapiens
cDNA PSEC0261 fis, clone NT2RP3004063, weakly similar to
MITOCHONDRIAL PRECURSOR PROTEINS IMPORT RECEPTOR. ).
Length = 806
Score = 30.7 bits (66), Expect = 3.7
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = -2
Query: 369 RAPADIIDRAPLPPNRVSNETMKVVVFQRRSRETISHLSTPLMSPYN 229
+A ++ PLP + S E +KV + SR +HL TPL + YN
Sbjct: 353 KAQTKVMLNDPLPGQKASPEYLKVKYLREYSRYLHAHLDTPL-TEYN 398
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 80,037,385
Number of Sequences: 237096
Number of extensions: 1668421
Number of successful extensions: 3620
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 3444
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3619
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5759818212
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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