Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0313.Seq
         (617 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81062-3|CAB02948.2|  325|Caenorhabditis elegans Hypothetical pr...    30   1.5  
U50301-7|AAB37055.1|  366|Caenorhabditis elegans Serpin protein ...    29   2.0  
AY525083-1|AAS13531.1|  366|Caenorhabditis elegans serine or cys...    29   2.0  
L08403-5|AAT92077.1|  531|Caenorhabditis elegans Hypothetical pr...    28   6.1  
L08403-4|AAA28021.1|  529|Caenorhabditis elegans Hypothetical pr...    28   6.1  
AC006603-1|AAF39749.1|  772|Caenorhabditis elegans Hypothetical ...    27   8.1  

>Z81062-3|CAB02948.2|  325|Caenorhabditis elegans Hypothetical
           protein F15A4.4 protein.
          Length = 325

 Score = 29.9 bits (64), Expect = 1.5
 Identities = 17/48 (35%), Positives = 28/48 (58%)
 Frame = +1

Query: 250 ICSAYGIYILIYCIDRIEAVEVFLKNLCQESGPFNFRYIIT*ISQCQF 393
           ICS+  +Y LI   DRI++ E   K+LC  S  ++  +++  +SQ  F
Sbjct: 207 ICSSVSLYKLIILPDRIKSAE---KSLCFVSLFYSIAFLVVAVSQLIF 251


>U50301-7|AAB37055.1|  366|Caenorhabditis elegans Serpin protein 7,
           isoform a protein.
          Length = 366

 Score = 29.5 bits (63), Expect = 2.0
 Identities = 17/35 (48%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
 Frame = -1

Query: 221 EQAESVVAEP-DFIFNKPYFFLILNKYNAPGFVGL 120
           + A  V+ EP DF  + P+FF +L+K N P FVGL
Sbjct: 331 KSAMFVMEEPKDFTADHPFFF-VLSKDNHPLFVGL 364


>AY525083-1|AAS13531.1|  366|Caenorhabditis elegans serine or
           cysteine protease inhibitorprotein.
          Length = 366

 Score = 29.5 bits (63), Expect = 2.0
 Identities = 17/35 (48%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
 Frame = -1

Query: 221 EQAESVVAEP-DFIFNKPYFFLILNKYNAPGFVGL 120
           + A  V+ EP DF  + P+FF +L+K N P FVGL
Sbjct: 331 KSAMFVMEEPKDFTADHPFFF-VLSKDNHPLFVGL 364


>L08403-5|AAT92077.1|  531|Caenorhabditis elegans Hypothetical
           protein F42H10.7b protein.
          Length = 531

 Score = 27.9 bits (59), Expect = 6.1
 Identities = 18/57 (31%), Positives = 29/57 (50%)
 Frame = -3

Query: 480 AFNKLRDPATLPYILTQTESKYLKLAVPIELTLRDSRDYVPEVKRAGLLTEIFEKNF 310
           +F+K  + A L    +  E K +KL+    +T +  R  VPE K    L +I EK++
Sbjct: 3   SFDKNDERAQLMVPKSINEGKVVKLSQKTLVTKKIERQVVPEEKYIAGLDKIIEKDY 59


>L08403-4|AAA28021.1|  529|Caenorhabditis elegans Hypothetical
           protein F42H10.7a protein.
          Length = 529

 Score = 27.9 bits (59), Expect = 6.1
 Identities = 18/57 (31%), Positives = 29/57 (50%)
 Frame = -3

Query: 480 AFNKLRDPATLPYILTQTESKYLKLAVPIELTLRDSRDYVPEVKRAGLLTEIFEKNF 310
           +F+K  + A L    +  E K +KL+    +T +  R  VPE K    L +I EK++
Sbjct: 3   SFDKNDERAQLMVPKSINEGKVVKLSQKTLVTKKIERQVVPEEKYIAGLDKIIEKDY 59


>AC006603-1|AAF39749.1|  772|Caenorhabditis elegans Hypothetical
           protein B0524.4 protein.
          Length = 772

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
 Frame = -3

Query: 528 SVVIGXLLNDNEDLSVAFNKLRDPATLPYILTQTESKYLKLAVPIELTLR-DSRDYVPE 355
           S +IG  +ND + L+  FN L D       + + E++ L L+   ELT   D+   VP+
Sbjct: 100 SQIIGLSVNDVKSLADGFNGLIDSLQADDAVKKVENRLLMLSEVWELTKGIDASPVVPD 158


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,063,999
Number of Sequences: 27780
Number of extensions: 261954
Number of successful extensions: 646
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 639
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 646
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1342816466
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)