Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0312.Seq
         (449 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069841-1|AAL39986.1|  780|Drosophila melanogaster SD08664p pro...    28   5.0  
AY069629-1|AAL39774.1|  274|Drosophila melanogaster LD40005p pro...    28   5.0  
BT015184-1|AAT94413.1|  589|Drosophila melanogaster RH67029p pro...    28   6.7  
AF039842-1|AAC04257.1|  591|Drosophila melanogaster Sprouty prot...    28   6.7  
AE014296-660|AAN11566.1|  589|Drosophila melanogaster CG1921-PC,...    28   6.7  
AE014296-659|AAF47772.1|  589|Drosophila melanogaster CG1921-PB,...    28   6.7  
BT030106-1|ABN49245.1|  204|Drosophila melanogaster GH13568p pro...    27   8.8  

>AY069841-1|AAL39986.1|  780|Drosophila melanogaster SD08664p
           protein.
          Length = 780

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 11/20 (55%), Positives = 12/20 (60%)
 Frame = +2

Query: 2   GGDQREGGANGGDGNCSNCQ 61
           G  QR GGA GG G C + Q
Sbjct: 430 GDQQRNGGARGGGGGCGDRQ 449


>AY069629-1|AAL39774.1|  274|Drosophila melanogaster LD40005p
           protein.
          Length = 274

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = -2

Query: 94  CRCCGCSWAAFLAV 53
           C CC CSWA  LA+
Sbjct: 94  CCCCSCSWAKCLAI 107


>BT015184-1|AAT94413.1|  589|Drosophila melanogaster RH67029p
           protein.
          Length = 589

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 12/23 (52%), Positives = 12/23 (52%), Gaps = 1/23 (4%)
 Frame = -2

Query: 145 RGCRTTAGSCYGRTAA-SCRCCG 80
           RGC      CYGR A   CRC G
Sbjct: 481 RGCMKLCEKCYGRFAGRGCRCQG 503


>AF039842-1|AAC04257.1|  591|Drosophila melanogaster Sprouty
           protein.
          Length = 591

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 12/23 (52%), Positives = 12/23 (52%), Gaps = 1/23 (4%)
 Frame = -2

Query: 145 RGCRTTAGSCYGRTAA-SCRCCG 80
           RGC      CYGR A   CRC G
Sbjct: 483 RGCMKLCEKCYGRFAGRGCRCQG 505


>AE014296-660|AAN11566.1|  589|Drosophila melanogaster CG1921-PC,
           isoform C protein.
          Length = 589

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 12/23 (52%), Positives = 12/23 (52%), Gaps = 1/23 (4%)
 Frame = -2

Query: 145 RGCRTTAGSCYGRTAA-SCRCCG 80
           RGC      CYGR A   CRC G
Sbjct: 481 RGCMKLCEKCYGRFAGRGCRCQG 503


>AE014296-659|AAF47772.1|  589|Drosophila melanogaster CG1921-PB,
           isoform B protein.
          Length = 589

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 12/23 (52%), Positives = 12/23 (52%), Gaps = 1/23 (4%)
 Frame = -2

Query: 145 RGCRTTAGSCYGRTAA-SCRCCG 80
           RGC      CYGR A   CRC G
Sbjct: 481 RGCMKLCEKCYGRFAGRGCRCQG 503


>BT030106-1|ABN49245.1|  204|Drosophila melanogaster GH13568p
           protein.
          Length = 204

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 16/40 (40%), Positives = 20/40 (50%)
 Frame = -2

Query: 145 RGCRTTAGSCYGRTAASCRCCGCSWAAFLAVAAISISPIC 26
           RG    AG C G  + SC C    WA F A+ A+ +S  C
Sbjct: 146 RGEGFLAG-CVGLVSCSCECDESIWAVFDALVAL-VSSSC 183


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,185,806
Number of Sequences: 53049
Number of extensions: 281420
Number of successful extensions: 893
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 820
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 892
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1455824790
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)