Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0311.Seq
         (548 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT001760-1|AAN71515.1|  159|Drosophila melanogaster RH06526p pro...   139   2e-33
AY071556-1|AAL49178.1|  159|Drosophila melanogaster RE62581p pro...   139   2e-33
AE014134-3588|AAF57259.1|  159|Drosophila melanogaster CG12775-P...   139   2e-33
AE014296-2968|AAF49299.1|  885|Drosophila melanogaster CG14586-P...    30   2.4  
U28966-1|AAB52512.1|  419|Drosophila melanogaster septin protein.      29   5.5  
AY061281-1|AAL28829.1|  419|Drosophila melanogaster LD20082p pro...    29   5.5  
AE014297-2823|AAF55783.1|  419|Drosophila melanogaster CG4173-PA...    29   5.5  
AE014297-754|AAF54238.1|  819|Drosophila melanogaster CG11718-PA...    29   5.5  
BT001708-1|AAN71463.1|  656|Drosophila melanogaster RE66405p pro...    28   7.2  
AY119475-1|AAM50129.1| 1470|Drosophila melanogaster GH05619p pro...    28   7.2  
AY058614-1|AAL13843.1|  676|Drosophila melanogaster LD30829p pro...    28   7.2  
AE014297-2096|AAF55237.2| 1470|Drosophila melanogaster CG31150-P...    28   7.2  
AE013599-2227|AAF58035.2|  746|Drosophila melanogaster CG15707-P...    28   7.2  

>BT001760-1|AAN71515.1|  159|Drosophila melanogaster RH06526p
           protein.
          Length = 159

 Score =  139 bits (337), Expect = 2e-33
 Identities = 59/76 (77%), Positives = 71/76 (93%)
 Frame = +1

Query: 28  MTNSKGYRRGTRDLFARRFRTHGTIPLSTYMKVYKVGDIVDIRGNGAVQKGMPHKVYHGK 207
           MTNSKGYRRGTRD+F+R FR HG IPLSTYM+V+K+GDIVDI+G+GAVQKG+P+K YHGK
Sbjct: 1   MTNSKGYRRGTRDMFSRPFRKHGVIPLSTYMRVFKIGDIVDIKGHGAVQKGLPYKAYHGK 60

Query: 208 TGRVYNVTAHALGVIV 255
           TGR++NVT HA+GVIV
Sbjct: 61  TGRIFNVTQHAVGVIV 76



 Score =  103 bits (247), Expect = 2e-22
 Identities = 46/71 (64%), Positives = 57/71 (80%)
 Frame = +3

Query: 255 NKRVRGRIIPKRINIRVEHVKHSKCRQDFLKRVKENERLLKEAKAAGKTVNLKRQPAPPK 434
           NKRVRG+I+ KR+N+R+EH+ HSKCR+DFL+RVKENERLLKEAK  G+ V+LKRQP  PK
Sbjct: 77  NKRVRGKILAKRVNVRIEHIHHSKCREDFLRRVKENERLLKEAKEKGQWVSLKRQPEQPK 136

Query: 435 AATSSVELRNP 467
            A    +L  P
Sbjct: 137 KAHFVKKLEEP 147



 Score = 41.9 bits (94), Expect = 5e-04
 Identities = 22/46 (47%), Positives = 26/46 (56%)
 Frame = +2

Query: 365 EATEGSQGCRQDRQPEETASSP*SCHIVSGTEKPVLLAPIPYEFVA 502
           EA E  Q     RQPE+    P   H V   E+P+ LAPIPYEF+A
Sbjct: 118 EAKEKGQWVSLKRQPEQ----PKKAHFVKKLEEPIALAPIPYEFIA 159


>AY071556-1|AAL49178.1|  159|Drosophila melanogaster RE62581p
           protein.
          Length = 159

 Score =  139 bits (337), Expect = 2e-33
 Identities = 59/76 (77%), Positives = 71/76 (93%)
 Frame = +1

Query: 28  MTNSKGYRRGTRDLFARRFRTHGTIPLSTYMKVYKVGDIVDIRGNGAVQKGMPHKVYHGK 207
           MTNSKGYRRGTRD+F+R FR HG IPLSTYM+V+K+GDIVDI+G+GAVQKG+P+K YHGK
Sbjct: 1   MTNSKGYRRGTRDMFSRPFRKHGVIPLSTYMRVFKIGDIVDIKGHGAVQKGLPYKAYHGK 60

Query: 208 TGRVYNVTAHALGVIV 255
           TGR++NVT HA+GVIV
Sbjct: 61  TGRIFNVTQHAVGVIV 76



 Score =  103 bits (247), Expect = 2e-22
 Identities = 46/71 (64%), Positives = 57/71 (80%)
 Frame = +3

Query: 255 NKRVRGRIIPKRINIRVEHVKHSKCRQDFLKRVKENERLLKEAKAAGKTVNLKRQPAPPK 434
           NKRVRG+I+ KR+N+R+EH+ HSKCR+DFL+RVKENERLLKEAK  G+ V+LKRQP  PK
Sbjct: 77  NKRVRGKILAKRVNVRIEHIHHSKCREDFLRRVKENERLLKEAKEKGQWVSLKRQPEQPK 136

Query: 435 AATSSVELRNP 467
            A    +L  P
Sbjct: 137 KAHFVKKLEEP 147



 Score = 41.9 bits (94), Expect = 5e-04
 Identities = 22/46 (47%), Positives = 26/46 (56%)
 Frame = +2

Query: 365 EATEGSQGCRQDRQPEETASSP*SCHIVSGTEKPVLLAPIPYEFVA 502
           EA E  Q     RQPE+    P   H V   E+P+ LAPIPYEF+A
Sbjct: 118 EAKEKGQWVSLKRQPEQ----PKKAHFVKKLEEPIALAPIPYEFIA 159


>AE014134-3588|AAF57259.1|  159|Drosophila melanogaster CG12775-PA
           protein.
          Length = 159

 Score =  139 bits (337), Expect = 2e-33
 Identities = 59/76 (77%), Positives = 71/76 (93%)
 Frame = +1

Query: 28  MTNSKGYRRGTRDLFARRFRTHGTIPLSTYMKVYKVGDIVDIRGNGAVQKGMPHKVYHGK 207
           MTNSKGYRRGTRD+F+R FR HG IPLSTYM+V+K+GDIVDI+G+GAVQKG+P+K YHGK
Sbjct: 1   MTNSKGYRRGTRDMFSRPFRKHGVIPLSTYMRVFKIGDIVDIKGHGAVQKGLPYKAYHGK 60

Query: 208 TGRVYNVTAHALGVIV 255
           TGR++NVT HA+GVIV
Sbjct: 61  TGRIFNVTQHAVGVIV 76



 Score =  103 bits (247), Expect = 2e-22
 Identities = 46/71 (64%), Positives = 57/71 (80%)
 Frame = +3

Query: 255 NKRVRGRIIPKRINIRVEHVKHSKCRQDFLKRVKENERLLKEAKAAGKTVNLKRQPAPPK 434
           NKRVRG+I+ KR+N+R+EH+ HSKCR+DFL+RVKENERLLKEAK  G+ V+LKRQP  PK
Sbjct: 77  NKRVRGKILAKRVNVRIEHIHHSKCREDFLRRVKENERLLKEAKEKGQWVSLKRQPEQPK 136

Query: 435 AATSSVELRNP 467
            A    +L  P
Sbjct: 137 KAHFVKKLEEP 147



 Score = 41.9 bits (94), Expect = 5e-04
 Identities = 22/46 (47%), Positives = 26/46 (56%)
 Frame = +2

Query: 365 EATEGSQGCRQDRQPEETASSP*SCHIVSGTEKPVLLAPIPYEFVA 502
           EA E  Q     RQPE+    P   H V   E+P+ LAPIPYEF+A
Sbjct: 118 EAKEKGQWVSLKRQPEQ----PKKAHFVKKLEEPIALAPIPYEFIA 159


>AE014296-2968|AAF49299.1|  885|Drosophila melanogaster CG14586-PA
           protein.
          Length = 885

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 15/34 (44%), Positives = 21/34 (61%)
 Frame = -1

Query: 143 MSPTLYTFMYVESGIVPCVRNLRANKSLVPRR*P 42
           + PT+YT +YVE+   P VR+L   K L  +R P
Sbjct: 710 IEPTVYTRIYVETSEEPDVRDLYRKKVLGSKRSP 743


>U28966-1|AAB52512.1|  419|Drosophila melanogaster septin protein.
          Length = 419

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 22/53 (41%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
 Frame = +3

Query: 285 KRINIRVE-HVKHSKCRQDFLKRVKENERLLKEAK--AAGKTVNLKRQPAPPK 434
           KR N   E   K  + RQ F++RVKE E  LKE++     K   LKR  A  K
Sbjct: 328 KRSNHLAELQSKEEEVRQMFVQRVKEKEAELKESEKDLHAKFEKLKRDHAEEK 380


>AY061281-1|AAL28829.1|  419|Drosophila melanogaster LD20082p
           protein.
          Length = 419

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 22/53 (41%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
 Frame = +3

Query: 285 KRINIRVE-HVKHSKCRQDFLKRVKENERLLKEAK--AAGKTVNLKRQPAPPK 434
           KR N   E   K  + RQ F++RVKE E  LKE++     K   LKR  A  K
Sbjct: 328 KRSNHLAELQSKEEEVRQMFVQRVKEKEAELKESEKDLHAKFEKLKRDHAEEK 380


>AE014297-2823|AAF55783.1|  419|Drosophila melanogaster CG4173-PA
           protein.
          Length = 419

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 22/53 (41%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
 Frame = +3

Query: 285 KRINIRVE-HVKHSKCRQDFLKRVKENERLLKEAK--AAGKTVNLKRQPAPPK 434
           KR N   E   K  + RQ F++RVKE E  LKE++     K   LKR  A  K
Sbjct: 328 KRSNHLAELQSKEEEVRQMFVQRVKEKEAELKESEKDLHAKFEKLKRDHAEEK 380


>AE014297-754|AAF54238.1|  819|Drosophila melanogaster CG11718-PA
           protein.
          Length = 819

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 17/38 (44%), Positives = 21/38 (55%)
 Frame = +2

Query: 389 CRQDRQPEETASSP*SCHIVSGTEKPVLLAPIPYEFVA 502
           CR+  +    ASSP S  I + T  P LL P+P  FVA
Sbjct: 46  CREREREVGGASSP-STTIATPTGTPPLLPPLPNTFVA 82


>BT001708-1|AAN71463.1|  656|Drosophila melanogaster RE66405p
           protein.
          Length = 656

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 12/38 (31%), Positives = 22/38 (57%)
 Frame = -3

Query: 177 LLNCTIASDVYNVSNFVHFHVRGERNSSMCAEPASEQV 64
           L+NC IA+    V+ ++   V    NS++ AEP  +++
Sbjct: 431 LINCDIANMHCFVNTYIKIRVHENNNSTLVAEPVIDRL 468


>AY119475-1|AAM50129.1| 1470|Drosophila melanogaster GH05619p protein.
          Length = 1470

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 12/34 (35%), Positives = 20/34 (58%)
 Frame = -3

Query: 180  TLLNCTIASDVYNVSNFVHFHVRGERNSSMCAEP 79
            T L+ TI  D+YN+ NF  + V   +   +C++P
Sbjct: 1405 TQLSSTIQFDLYNILNFEIYGVYKHQMCGLCSKP 1438


>AY058614-1|AAL13843.1|  676|Drosophila melanogaster LD30829p
           protein.
          Length = 676

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 12/38 (31%), Positives = 22/38 (57%)
 Frame = -3

Query: 177 LLNCTIASDVYNVSNFVHFHVRGERNSSMCAEPASEQV 64
           L+NC IA+    V+ ++   V    NS++ AEP  +++
Sbjct: 361 LINCDIANMHCFVNTYIKIRVHENNNSTLVAEPVIDRL 398


>AE014297-2096|AAF55237.2| 1470|Drosophila melanogaster CG31150-PA
            protein.
          Length = 1470

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 12/34 (35%), Positives = 20/34 (58%)
 Frame = -3

Query: 180  TLLNCTIASDVYNVSNFVHFHVRGERNSSMCAEP 79
            T L+ TI  D+YN+ NF  + V   +   +C++P
Sbjct: 1405 TQLSSTIQFDLYNILNFEIYGVYKHQMCGLCSKP 1438


>AE013599-2227|AAF58035.2|  746|Drosophila melanogaster CG15707-PA
           protein.
          Length = 746

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 12/38 (31%), Positives = 22/38 (57%)
 Frame = -3

Query: 177 LLNCTIASDVYNVSNFVHFHVRGERNSSMCAEPASEQV 64
           L+NC IA+    V+ ++   V    NS++ AEP  +++
Sbjct: 431 LINCDIANMHCFVNTYIKIRVHENNNSTLVAEPVIDRL 468


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,726,233
Number of Sequences: 53049
Number of extensions: 517637
Number of successful extensions: 1896
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1847
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1896
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2089831299
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)