Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0310.Seq
(595 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g28770.1 68416.m03591 expressed protein 40 0.002
At5g40340.1 68418.m04894 PWWP domain-containing protein KED, Nic... 39 0.002
At5g53800.1 68418.m06685 expressed protein 37 0.009
At2g22795.1 68415.m02704 expressed protein 37 0.012
At5g61150.2 68418.m07672 leo1-like family protein weak similarit... 36 0.027
At5g23080.1 68418.m02698 SWAP (Suppressor-of-White-APricot)/surp... 36 0.027
At5g09880.1 68418.m01142 RNA recognition motif (RRM)-containing ... 35 0.047
At2g43900.1 68415.m05457 endonuclease/exonuclease/phosphatase fa... 35 0.047
At1g20920.1 68414.m02619 DEAD box RNA helicase, putative similar... 35 0.047
At3g29075.1 68416.m03637 glycine-rich protein 34 0.062
At2g27470.1 68415.m03320 CCAAT-box binding transcription factor ... 34 0.062
At5g60030.1 68418.m07527 expressed protein 33 0.11
At1g76780.1 68414.m08935 expressed protein ; expression supporte... 33 0.11
At1g44910.1 68414.m05146 FF domain-containing protein / WW domai... 33 0.11
At5g60530.1 68418.m07590 late embryogenesis abundant protein-rel... 33 0.14
At3g62240.1 68416.m06992 zinc finger (C2H2 type) family protein ... 33 0.14
At2g22100.1 68415.m02625 RNA recognition motif (RRM)-containing ... 33 0.14
At1g56660.1 68414.m06516 expressed protein 33 0.14
At5g16780.1 68418.m01965 SART-1 family protein contains Pfam dom... 33 0.19
At4g37820.1 68417.m05351 expressed protein Kaposi's sarcoma-asso... 33 0.19
At3g59800.1 68416.m06673 expressed protein 33 0.19
At5g16680.1 68418.m01951 PHD finger family protein contains Pfam... 32 0.25
At5g63550.1 68418.m07976 expressed protein 32 0.33
At5g61150.1 68418.m07671 leo1-like family protein weak similarit... 32 0.33
At4g36690.3 68417.m05206 U2 snRNP auxiliary factor large subunit... 32 0.33
At4g36690.2 68417.m05207 U2 snRNP auxiliary factor large subunit... 32 0.33
At4g36690.1 68417.m05205 U2 snRNP auxiliary factor large subunit... 32 0.33
At4g15030.1 68417.m02309 expressed protein 32 0.33
At4g35940.1 68417.m05113 expressed protein 31 0.44
At5g12230.1 68418.m01435 expressed protein 31 0.58
At3g03340.1 68416.m00332 LUC7 N_terminus domain-containing prote... 31 0.58
At1g03530.1 68414.m00334 expressed protein similar to hypothetic... 31 0.58
At5g58880.1 68418.m07377 hypothetical protein 31 0.77
At5g56360.1 68418.m07034 calmodulin-binding protein similar to a... 31 0.77
At3g50670.1 68416.m05542 U1 small nuclear ribonucleoprotein 70 (... 31 0.77
At3g23900.1 68416.m03003 RNA recognition motif (RRM)-containing ... 31 0.77
At5g25060.1 68418.m02970 RNA recognition motif (RRM)-containing ... 30 1.0
At3g60110.1 68416.m06712 DNA-binding bromodomain-containing prot... 30 1.0
At5g53440.1 68418.m06641 expressed protein 30 1.3
At5g24290.2 68418.m02858 integral membrane family protein contai... 30 1.3
At2g34300.1 68415.m04196 dehydration-responsive protein-related ... 30 1.3
At5g44690.1 68418.m05476 hypothetical protein 29 1.8
At4g33740.2 68417.m04791 expressed protein 29 1.8
At4g33740.1 68417.m04790 expressed protein 29 1.8
At4g00990.1 68417.m00133 transcription factor jumonji (jmjC) dom... 29 1.8
At2g20280.1 68415.m02369 zinc finger (CCCH-type) family protein ... 29 1.8
At5g64030.1 68418.m08039 dehydration-responsive protein-related ... 29 2.3
At4g37900.1 68417.m05360 glycine-rich protein 29 2.3
At3g51070.1 68416.m05592 dehydration-responsive protein-related ... 29 2.3
At2g29210.1 68415.m03550 splicing factor PWI domain-containing p... 29 2.3
At2g12875.1 68415.m01402 hypothetical protein 29 2.3
At1g70620.2 68414.m08137 cyclin-related contains weak similarity... 29 2.3
At1g70620.1 68414.m08138 cyclin-related contains weak similarity... 29 2.3
At1g56340.1 68414.m06476 calreticulin 1 (CRT1) identical to calr... 29 2.3
At1g15340.1 68414.m01835 methyl-CpG-binding domain-containing pr... 29 2.3
At5g47690.1 68418.m05887 expressed protein 29 3.1
At5g22320.1 68418.m02604 leucine-rich repeat family protein cont... 29 3.1
At4g16630.1 68417.m02514 DEAD/DEAH box helicase, putative (RH28)... 29 3.1
At4g11560.1 68417.m01853 bromo-adjacent homology (BAH) domain-co... 29 3.1
At3g48120.1 68416.m05248 expressed protein 29 3.1
At1g67120.1 68414.m07636 midasin-related similar to Midasin (MID... 29 3.1
At1g29470.1 68414.m03605 dehydration-responsive protein-related ... 29 3.1
At1g01440.1 68414.m00059 extra-large G-protein-related weak simi... 29 3.1
At5g65770.1 68418.m08276 nuclear matrix constituent protein-rela... 28 4.1
At5g65490.1 68418.m08236 expressed protein similar to unknown pr... 28 4.1
At5g62750.1 68418.m07877 expressed protein predicted proteins, C... 28 4.1
At5g16500.1 68418.m01928 protein kinase family protein contains ... 28 4.1
At4g24580.1 68417.m03522 pleckstrin homology (PH) domain-contain... 28 4.1
At3g63400.2 68416.m07138 peptidyl-prolyl cis-trans isomerase cyc... 28 4.1
At3g63400.1 68416.m07137 peptidyl-prolyl cis-trans isomerase cyc... 28 4.1
At1g70505.1 68414.m08114 expressed protein 28 4.1
At1g28400.1 68414.m03492 expressed protein similar to E6 (GI:100... 28 4.1
At1g21390.1 68414.m02676 expressed protein 28 4.1
At1g14040.1 68414.m01660 EXS family protein / ERD1/XPR1/SYG1 fam... 28 4.1
At1g13190.1 68414.m01529 RNA recognition motif (RRM)-containing ... 28 4.1
At5g01400.1 68418.m00053 expressed protein contains low similari... 28 5.4
At4g25880.2 68417.m03722 pumilio/Puf RNA-binding domain-containi... 28 5.4
At4g25880.1 68417.m03721 pumilio/Puf RNA-binding domain-containi... 28 5.4
At3g58050.1 68416.m06471 expressed protein 28 5.4
At3g18810.1 68416.m02389 protein kinase family protein contains ... 28 5.4
At1g74830.1 68414.m08670 expressed protein contains Pfam profile... 28 5.4
At1g60900.1 68414.m06856 U2 snRNP auxiliary factor large subunit... 28 5.4
At5g64910.1 68418.m08165 expressed protein ; expression support... 27 7.1
At5g24290.1 68418.m02857 integral membrane family protein contai... 27 7.1
At5g08450.2 68418.m00996 expressed protein KED, Nicotiana tabacu... 27 7.1
At5g08450.1 68418.m00995 expressed protein KED, Nicotiana tabacu... 27 7.1
At4g24590.1 68417.m03523 expressed protein 27 7.1
At2g43160.3 68415.m05361 epsin N-terminal homology (ENTH) domain... 27 7.1
At2g43160.2 68415.m05360 epsin N-terminal homology (ENTH) domain... 27 7.1
At2g43160.1 68415.m05359 epsin N-terminal homology (ENTH) domain... 27 7.1
At1g79280.1 68414.m09242 expressed protein weak similarity to Nu... 27 7.1
At1g69070.1 68414.m07903 expressed protein 27 7.1
At1g56110.1 68414.m06443 nucleolar protein Nop56, putative simil... 27 7.1
At1g35330.1 68414.m04379 zinc finger (C3HC4-type RING finger) fa... 27 7.1
At1g19990.1 68414.m02504 expressed protein ; expression supporte... 27 7.1
At1g19880.1 68414.m02493 regulator of chromosome condensation (R... 27 7.1
At5g66950.1 68418.m08440 expressed protein 27 9.4
At5g61330.1 68418.m07696 rRNA processing protein-related contain... 27 9.4
At5g59730.1 68418.m07487 exocyst subunit EXO70 family protein le... 27 9.4
At5g55660.1 68418.m06940 expressed protein similar to unknown pr... 27 9.4
At5g51410.2 68418.m06374 LUC7 N_terminus domain-containing prote... 27 9.4
At5g51410.1 68418.m06373 LUC7 N_terminus domain-containing prote... 27 9.4
At5g48610.1 68418.m06012 expressed protein ; expression supporte... 27 9.4
At5g44800.1 68418.m05492 chromodomain-helicase-DNA-binding famil... 27 9.4
At5g37010.1 68418.m04438 expressed protein 27 9.4
At5g08610.1 68418.m01024 DEAD box RNA helicase (RH26) strong sim... 27 9.4
At5g03680.1 68418.m00327 trihelix DNA-binding protein, putative ... 27 9.4
At4g37210.2 68417.m05267 tetratricopeptide repeat (TPR)-containi... 27 9.4
At4g37210.1 68417.m05268 tetratricopeptide repeat (TPR)-containi... 27 9.4
At4g29060.1 68417.m04157 elongation factor Ts family protein sim... 27 9.4
At3g45090.2 68416.m04862 2-phosphoglycerate kinase-related conta... 27 9.4
At3g45090.1 68416.m04863 2-phosphoglycerate kinase-related conta... 27 9.4
At3g11590.1 68416.m01416 expressed protein 27 9.4
At2g39260.1 68415.m04821 MIF4G domain-containing protein similar... 27 9.4
At2g35210.1 68415.m04319 human Rev interacting-like family prote... 27 9.4
At1g80930.1 68414.m09495 MIF4G domain-containing protein / MA3 d... 27 9.4
At1g66050.1 68414.m07497 zinc finger (C3HC4-type RING finger) fa... 27 9.4
At1g63420.1 68414.m07172 expressed protein 27 9.4
At1g26680.1 68414.m03250 transcriptional factor B3 family protei... 27 9.4
At1g22882.1 68414.m02857 expressed protein 27 9.4
>At3g28770.1 68416.m03591 expressed protein
Length = 2081
Score = 39.5 bits (88), Expect = 0.002
Identities = 25/80 (31%), Positives = 33/80 (41%), Gaps = 1/80 (1%)
Frame = -2
Query: 255 ESGVTVEREKSE-SNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSN 79
E + REK E KKS+ E + E +DK R ERKS + EE + +
Sbjct: 1003 EDSASKNREKKEYEEKKSKTKEEAKKEKKKSQDKKREEKDSEERKSKKEKEESRDLKAKK 1062
Query: 78 KSFNDGDASADYQTKSKKVE 19
K + KSKK E
Sbjct: 1063 KEEETKEKKESENHKSKKKE 1082
Score = 38.3 bits (85), Expect = 0.004
Identities = 31/82 (37%), Positives = 42/82 (51%), Gaps = 3/82 (3%)
Frame = -2
Query: 237 EREKSESNK-KSREFENKEA-ESSTYRDKNRSVNSGSERKSSGKDEEYSE-QNSSNKSFN 67
E KSE++K K +NKE ES KNR E+KS K+E E + S +K
Sbjct: 980 ETTKSENSKLKEENKDNKEKKESEDSASKNREKKEYEEKKSKTKEEAKKEKKKSQDKKRE 1039
Query: 66 DGDASADYQTKSKKVEKNSARD 1
+ D+ + KSKK EK +RD
Sbjct: 1040 EKDSE---ERKSKK-EKEESRD 1057
Score = 35.9 bits (79), Expect = 0.020
Identities = 24/105 (22%), Positives = 52/105 (49%), Gaps = 5/105 (4%)
Frame = -2
Query: 300 NQ*IIRNEDRQA*WLESGVTVEREKSESNKKSREFEN---KEAESSTYRDK-NRSVNSGS 133
N + + ED + +S + +E+++ NK+ +E E+ K E Y +K +++
Sbjct: 968 NNELKKQEDNKKETTKSENSKLKEENKDNKEKKESEDSASKNREKKEYEEKKSKTKEEAK 1027
Query: 132 ERKSSGKDEEYSEQNSSN-KSFNDGDASADYQTKSKKVEKNSARD 1
+ K +D++ E++S KS + + S D + K K+ E ++
Sbjct: 1028 KEKKKSQDKKREEKDSEERKSKKEKEESRDLKAKKKEEETKEKKE 1072
Score = 31.1 bits (67), Expect = 0.58
Identities = 17/90 (18%), Positives = 42/90 (46%)
Frame = -2
Query: 282 NEDRQA*WLESGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEE 103
+ED ++ E +++ ES + +E + K+ E ++ N+ +E+K S +
Sbjct: 1087 HEDNKSMKKEEDKKEKKKHEESKSRKKEEDKKDMEKLEDQNSNKKKEDKNEKKKSQHVKL 1146
Query: 102 YSEQNSSNKSFNDGDASADYQTKSKKVEKN 13
+++ + + + S + +S K +KN
Sbjct: 1147 VKKESDKKEKKENEEKSETKEIESSKSQKN 1176
Score = 29.5 bits (63), Expect = 1.8
Identities = 22/76 (28%), Positives = 35/76 (46%), Gaps = 3/76 (3%)
Frame = -2
Query: 237 EREKSESNKKSREFENKEAESSTYRD--KNRSVNSGSERKSSGKDEEYSEQNSSNKSFND 64
E+++S+ K +NK+ S+ RD K RS E K KD Y + K+ N
Sbjct: 789 EKKESKDAKSVETKDNKKLSSTENRDEAKERSGEDNKEDKEESKD--YQSVEAKEKNENG 846
Query: 63 G-DASADYQTKSKKVE 19
G D + + SK ++
Sbjct: 847 GVDTNVGNKEDSKDLK 862
Score = 29.1 bits (62), Expect = 2.3
Identities = 22/87 (25%), Positives = 37/87 (42%), Gaps = 5/87 (5%)
Frame = -2
Query: 246 VTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSS-----GKDEEYSEQNSS 82
V E +K E + + E KE ESS + + V+ E+KSS K++E E
Sbjct: 1147 VKKESDKKEKKENEEKSETKEIESS--KSQKNEVDK-KEKKSSKDQQKKKEKEMKESEEK 1203
Query: 81 NKSFNDGDASADYQTKSKKVEKNSARD 1
N+ D + K +K + ++
Sbjct: 1204 KLKKNEEDRKKQTSVEENKKQKETKKE 1230
>At5g40340.1 68418.m04894 PWWP domain-containing protein KED,
Nicotiana tabacum, EMBL:AB009883
Length = 1008
Score = 39.1 bits (87), Expect = 0.002
Identities = 26/80 (32%), Positives = 44/80 (55%), Gaps = 2/80 (2%)
Frame = -2
Query: 237 EREKSESNKKSREFE--NKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNKSFND 64
+R+KSES K+ E E KEA ST +++ R S S+++S G++E E + S K
Sbjct: 733 KRKKSESKKEGGEGEETQKEANESTKKERKRK-KSESKKQSDGEEETQKEPSESTKK-ER 790
Query: 63 GDASADYQTKSKKVEKNSAR 4
+ + + K++ VE+ R
Sbjct: 791 KRKNPESKKKAEAVEEEETR 810
>At5g53800.1 68418.m06685 expressed protein
Length = 351
Score = 37.1 bits (82), Expect = 0.009
Identities = 19/59 (32%), Positives = 29/59 (49%)
Frame = -2
Query: 258 LESGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSS 82
LESG E+E+ ++K R + +SS R + R +S S S + EYS+ S
Sbjct: 66 LESGSESEKEERRRSRKDRGKRKSDRKSSRSRRRRRDYSSSSSDSESESESEYSDSEES 124
Score = 34.7 bits (76), Expect = 0.047
Identities = 21/71 (29%), Positives = 30/71 (42%)
Frame = -2
Query: 228 KSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNKSFNDGDASA 49
+SES + + E E+E R K + E K + ++ NKS DGD
Sbjct: 111 ESESESEYSDSEESESEDERRRRKRKRKEREEEEKERKRRRREKDKKKRNKSDKDGDKKR 170
Query: 48 DYQTKSKKVEK 16
+ K KK EK
Sbjct: 171 K-EKKKKKSEK 180
Score = 27.5 bits (58), Expect = 7.1
Identities = 12/47 (25%), Positives = 25/47 (53%)
Frame = -3
Query: 365 TGSDDSDKNRGKDTDDKYSETGTNKSSETKTGKRDGSRAASQSKGKN 225
+GS+ + R + D+ KSS ++ +RD S ++S S+ ++
Sbjct: 68 SGSESEKEERRRSRKDRGKRKSDRKSSRSRRRRRDYSSSSSDSESES 114
>At2g22795.1 68415.m02704 expressed protein
Length = 734
Score = 36.7 bits (81), Expect = 0.012
Identities = 21/95 (22%), Positives = 48/95 (50%)
Frame = -2
Query: 285 RNEDRQA*WLESGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDE 106
+NED++ +ES E ++ E K +E E+ E + ++ N S + KD+
Sbjct: 484 KNEDKETEKIESSFLEETKEKEDETKEKE-ESSSQEKTEEKETETKDNEESSSQEETKDK 542
Query: 105 EYSEQNSSNKSFNDGDASADYQTKSKKVEKNSARD 1
E + + + + S + +T++K+ E++S+++
Sbjct: 543 E--NEKIEKEEASSQEESKENETETKEKEESSSQE 575
Score = 35.1 bits (77), Expect = 0.036
Identities = 19/79 (24%), Positives = 39/79 (49%), Gaps = 3/79 (3%)
Frame = -2
Query: 243 TVEREKSESNKKSREFEN---KEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNKS 73
T E+E+S S ++++E EN ++ ES+ + N E++ S EE E+ + K
Sbjct: 565 TKEKEESSSQEETKEKENEKIEKEESAPQEETKEKENEKIEKEESASQEETKEKETETKE 624
Query: 72 FNDGDASADYQTKSKKVEK 16
+ ++ + + + EK
Sbjct: 625 KEESSSNESQENVNTESEK 643
Score = 34.7 bits (76), Expect = 0.047
Identities = 17/79 (21%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Frame = -2
Query: 240 VEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNKSFN-D 64
+E+E+S ++++E EN++ E ++++ S E+++ K++E S N S ++ N +
Sbjct: 585 IEKEESAPQEETKEKENEKIE----KEESASQEETKEKETETKEKEESSSNESQENVNTE 640
Query: 63 GDASADYQTKSKKVEKNSA 7
+ + KK +++++
Sbjct: 641 SEKKEQVEENEKKTDEDTS 659
Score = 33.1 bits (72), Expect = 0.14
Identities = 21/84 (25%), Positives = 40/84 (47%), Gaps = 4/84 (4%)
Frame = -2
Query: 249 GVTVEREKS--ESNKKSREFENKEAESSTYRDK--NRSVNSGSERKSSGKDEEYSEQNSS 82
G REKS E ++ + +N +E S +K NR ++ E K DE+ + + +
Sbjct: 239 GTEESREKSGTEESEVEEKKDNGSSEESEVEEKKENRGIDESEESKEKDIDEKANIEEAR 298
Query: 81 NKSFNDGDASADYQTKSKKVEKNS 10
++ DAS++ +S++ S
Sbjct: 299 ENNYKGDDASSEVVHESEEKTSES 322
Score = 32.7 bits (71), Expect = 0.19
Identities = 21/78 (26%), Positives = 36/78 (46%), Gaps = 2/78 (2%)
Frame = -2
Query: 255 ESGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSG-SERKSSGKDEEYS-EQNSS 82
E+G T E EKS S + E + + R+K+ + S E+K +G EE E+
Sbjct: 214 ENGGTEENEKSGSEESEVEEKKDNGGTEESREKSGTEESEVEEKKDNGSSEESEVEEKKE 273
Query: 81 NKSFNDGDASADYQTKSK 28
N+ ++ + S + K
Sbjct: 274 NRGIDESEESKEKDIDEK 291
Score = 30.3 bits (65), Expect = 1.0
Identities = 24/82 (29%), Positives = 41/82 (50%), Gaps = 5/82 (6%)
Frame = -2
Query: 255 ESGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSG-SERKSSGKDEEYSEQNSSN 79
++G T E EKS + + E E KE + +K+ S S E+K +G EE E++ +
Sbjct: 192 DNGGTEENEKSGTEESEVE-ERKENGGTEENEKSGSEESEVEEKKDNGGTEESREKSGTE 250
Query: 78 KS----FNDGDASADYQTKSKK 25
+S D +S + + + KK
Sbjct: 251 ESEVEEKKDNGSSEESEVEEKK 272
Score = 29.9 bits (64), Expect = 1.3
Identities = 22/86 (25%), Positives = 45/86 (52%)
Frame = -2
Query: 258 LESGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSN 79
+E +E+E ++SN +S K S + S S S+ +S GK+ E ++ S+
Sbjct: 385 MEKNELLEKEFNDSNGES-SVTGKSTGSGDGGSQETSEVS-SQEESKGKESETKDKEESS 442
Query: 78 KSFNDGDASADYQTKSKKVEKNSARD 1
+ S D +T++K+ E++S+++
Sbjct: 443 SQ----EESKDRETETKEKEESSSQE 464
Score = 29.1 bits (62), Expect = 2.3
Identities = 18/86 (20%), Positives = 36/86 (41%), Gaps = 1/86 (1%)
Frame = -2
Query: 255 ESGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGS-ERKSSGKDEEYSEQNSSN 79
E T E E E EN+++ + + R N G+ E + SG +E E+ N
Sbjct: 156 EKSGTEESEVEERKDNGGTEENEKSGTEESEVEERKDNGGTEENEKSGTEESEVEERKEN 215
Query: 78 KSFNDGDASADYQTKSKKVEKNSARD 1
+ + S +++ ++ + N +
Sbjct: 216 GGTEENEKSGSEESEVEEKKDNGGTE 241
Score = 29.1 bits (62), Expect = 2.3
Identities = 20/88 (22%), Positives = 38/88 (43%), Gaps = 3/88 (3%)
Frame = -2
Query: 255 ESGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSE--RKSSGKDEEYSEQNSS 82
E T E E E + EN+++ S + + N G+E R+ SG +E E+
Sbjct: 200 EKSGTEESEVEERKENGGTEENEKSGSEESEVEEKKDNGGTEESREKSGTEESEVEEKKD 259
Query: 81 NKSFNDGDASADYQTKS-KKVEKNSARD 1
N S + + + + + E++ +D
Sbjct: 260 NGSSEESEVEEKKENRGIDESEESKEKD 287
>At5g61150.2 68418.m07672 leo1-like family protein weak similarity
to SP|P38439 LEO1 protein {Saccharomyces cerevisiae};
contains Pfam profile PF04004: Leo1-like protein;
supporting cDNA gi|21929714|gb|AF490422.1|
Length = 623
Score = 35.5 bits (78), Expect = 0.027
Identities = 20/78 (25%), Positives = 40/78 (51%)
Frame = -2
Query: 237 EREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNKSFNDGD 58
+ E SES ++ E+E +E E + R +S E + +++E E+ SN+ ++D D
Sbjct: 516 QMEYSESEREESEYETEEEEEEKSPARGRGKDSEDEYEEDAEEDE-EERGKSNR-YSDED 573
Query: 57 ASADYQTKSKKVEKNSAR 4
+ +++K + S R
Sbjct: 574 EEEEEGGRAEKDHRGSGR 591
>At5g23080.1 68418.m02698 SWAP (Suppressor-of-White-APricot)/surp
domain-containing protein contains Pfam domain PF01805:
Surp module
Length = 930
Score = 35.5 bits (78), Expect = 0.027
Identities = 22/83 (26%), Positives = 41/83 (49%), Gaps = 6/83 (7%)
Frame = -2
Query: 234 REKSESNKKSREFENKEAESSTYRDKNRSVNSG----SERKSSGKDEEYSEQNSSNKSFN 67
+EK E S ++E +S R+K+ SG S +SSG + N ++ N
Sbjct: 801 KEKVEEKTSSLTLGSEEEKSRKKREKSPGKRSGGNDLSSSESSGDERRRKRYNKKDRHRN 860
Query: 66 D--GDASADYQTKSKKVEKNSAR 4
D D+S+DY ++ K+ ++ ++
Sbjct: 861 DSESDSSSDYHSRDKQGSRSRSK 883
>At5g09880.1 68418.m01142 RNA recognition motif (RRM)-containing
protein
Length = 527
Score = 34.7 bits (76), Expect = 0.047
Identities = 27/81 (33%), Positives = 39/81 (48%)
Frame = -2
Query: 243 TVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNKSFND 64
TVE E + SNKK E N+ +E S YR + G ER+ EE + S KS D
Sbjct: 12 TVE-EGAGSNKKKEESGNERSERS-YRKRE-----GGERQGEEGGEEERVSSRSKKSRGD 64
Query: 63 GDASADYQTKSKKVEKNSARD 1
G+ + + ++ S+RD
Sbjct: 65 GEENGGGKRDRERERHRSSRD 85
>At2g43900.1 68415.m05457 endonuclease/exonuclease/phosphatase family
protein belongs to Pfam:PF03372:
Endonuclease/Exonuclease/phosphatase family; contains 3
WD-40 repeats (PF00400);similar to Type II
inositol-1,4,5-trisphosphate 5-phosphatase EC 3.1.3.56
(5PTASE) (INPP5B) (SP:P32019) [Homo sapiens]
Length = 1305
Score = 34.7 bits (76), Expect = 0.047
Identities = 21/67 (31%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Frame = -2
Query: 225 SESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNKSF--NDGDAS 52
S+S+KKS N ++ + D N + S+ S+ K + S+ +S++KS +DGD+
Sbjct: 1146 SKSSKKSDGDSNSKSSKKSDGDSNSKSSKKSDGDSNSKSSKKSDGDSNSKSSKKSDGDSC 1205
Query: 51 ADYQTKS 31
+ Q KS
Sbjct: 1206 SKSQKKS 1212
Score = 33.5 bits (73), Expect = 0.11
Identities = 20/67 (29%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Frame = -2
Query: 225 SESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNKSF--NDGDAS 52
S+S+KKS N ++ + D N + S+ S+ K + S+ +S++KS +DGD++
Sbjct: 1122 SKSSKKSDGDSNSKSSKKSDGDSNSKSSKKSDGDSNSKSSKKSDGDSNSKSSKKSDGDSN 1181
Query: 51 ADYQTKS 31
+ KS
Sbjct: 1182 SKSSKKS 1188
Score = 33.5 bits (73), Expect = 0.11
Identities = 20/67 (29%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Frame = -2
Query: 225 SESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNKSF--NDGDAS 52
S+S+KKS N ++ + D N + S+ S+ K + S+ +S++KS +DGD++
Sbjct: 1134 SKSSKKSDGDSNSKSSKKSDGDSNSKSSKKSDGDSNSKSSKKSDGDSNSKSSKKSDGDSN 1193
Query: 51 ADYQTKS 31
+ KS
Sbjct: 1194 SKSSKKS 1200
Score = 33.5 bits (73), Expect = 0.11
Identities = 18/74 (24%), Positives = 38/74 (51%)
Frame = -2
Query: 225 SESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNKSFNDGDASAD 46
S+S+KKS N ++ + D N + S+ S K ++ S+ ++++KS GD +
Sbjct: 1170 SKSSKKSDGDSNSKSSKKSDGDSNSKSSKKSDGDSCSKSQKKSDGDTNSKSQKKGDGDSS 1229
Query: 45 YQTKSKKVEKNSAR 4
++ K +S++
Sbjct: 1230 SKSHKKNDGDSSSK 1243
Score = 32.3 bits (70), Expect = 0.25
Identities = 20/66 (30%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Frame = -2
Query: 225 SESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNKS--FNDGDAS 52
S+S+KKS N ++ + D N + S+ S+ K + S+ +S +KS +DGD +
Sbjct: 1158 SKSSKKSDGDSNSKSSKKSDGDSNSKSSKKSDGDSNSKSSKKSDGDSCSKSQKKSDGDTN 1217
Query: 51 ADYQTK 34
+ Q K
Sbjct: 1218 SKSQKK 1223
>At1g20920.1 68414.m02619 DEAD box RNA helicase, putative similar to
RNA helicase [Rattus norvegicus] GI:897915; contains
Pfam profiles PF00270: DEAD/DEAH box helicase, PF00271:
Helicase conserved C-terminal domain
Length = 1166
Score = 34.7 bits (76), Expect = 0.047
Identities = 18/75 (24%), Positives = 35/75 (46%), Gaps = 5/75 (6%)
Frame = -2
Query: 228 KSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYS-----EQNSSNKSFND 64
++ ++SRE N+E++ RD R G ERK +++ E + KS D
Sbjct: 195 RNRERERSREVGNEESDDDVKRDLKRRRKEGGERKEKEREKSVGRSSRHEDSPKRKSVED 254
Query: 63 GDASADYQTKSKKVE 19
+ +T+ +++E
Sbjct: 255 NGEKKEKKTREEELE 269
Score = 29.5 bits (63), Expect = 1.8
Identities = 17/70 (24%), Positives = 36/70 (51%)
Frame = -2
Query: 285 RNEDRQA*WLESGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDE 106
R +DR+ ++S + + + +++ + + KE E RDK+R RKSS ++
Sbjct: 45 REKDRRKKRVKSSDSEDDYDRDDDEEREKRKEKERERRR-RDKDRVKRRSERRKSSDSED 103
Query: 105 EYSEQNSSNK 76
+ E++ +K
Sbjct: 104 DVEEEDERDK 113
Score = 27.9 bits (59), Expect = 5.4
Identities = 22/85 (25%), Positives = 39/85 (45%), Gaps = 6/85 (7%)
Frame = -2
Query: 240 VEREKSESNKKSREFENKEAE-SSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNKSFND 64
+E EKS+ + + +EA+ + RD++R +ERK E+ E++ K
Sbjct: 1 MEVEKSKYRSEDLDVVEEEADLKKSRRDRDR----SNERKKDKGSEKRREKDRRKKRVKS 56
Query: 63 GDASADY-----QTKSKKVEKNSAR 4
D+ DY + + K+ EK R
Sbjct: 57 SDSEDDYDRDDDEEREKRKEKERER 81
Score = 27.1 bits (57), Expect = 9.4
Identities = 19/79 (24%), Positives = 34/79 (43%)
Frame = -2
Query: 237 EREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNKSFNDGD 58
ER++ + K+ RE E + +DK R ER+ ++E E+ + D
Sbjct: 127 ERDRGKDRKRDREREER-------KDKEREREKDRERREREREEREKERVKERERRERED 179
Query: 57 ASADYQTKSKKVEKNSARD 1
D + + K E+ S R+
Sbjct: 180 GERDRREREK--ERGSRRN 196
>At3g29075.1 68416.m03637 glycine-rich protein
Length = 294
Score = 34.3 bits (75), Expect = 0.062
Identities = 14/58 (24%), Positives = 30/58 (51%)
Frame = -2
Query: 231 EKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNKSFNDGD 58
EKS+ +K ++ + K+ +++ D+ + + K D++Y E+ K +ND D
Sbjct: 159 EKSKKKEKEKKKDKKKDGNNSEDDEFKKKKKKEQYKEHHDDDDYDEKKKKKKDYNDDD 216
Score = 28.7 bits (61), Expect = 3.1
Identities = 14/60 (23%), Positives = 30/60 (50%)
Frame = -2
Query: 237 EREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNKSFNDGD 58
+++K +N + EF+ K+ + Y++ + + E+K KD ++ K +ND D
Sbjct: 171 DKKKDGNNSEDDEFKKKKKKEQ-YKEHHDD-DDYDEKKKKKKDYNDDDEKKKKKHYNDDD 228
Score = 28.3 bits (60), Expect = 4.1
Identities = 19/78 (24%), Positives = 34/78 (43%)
Frame = -2
Query: 234 REKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNKSFNDGDA 55
++ + ++KS++ E KE + +D N S + E K K E+Y E + +
Sbjct: 152 KDYDDGDEKSKKKE-KEKKKDKKKDGNNSEDD--EFKKKKKKEQYKEHHDDDDYDEKKKK 208
Query: 54 SADYQTKSKKVEKNSARD 1
DY +K +K D
Sbjct: 209 KKDYNDDDEKKKKKHYND 226
Score = 27.9 bits (59), Expect = 5.4
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = -3
Query: 362 GSDDSDKNRGKDTDDKYSETGTNKSSETKTGKRDGSRA 249
G D K+ GKD DD ++ + + K K+DG+ +
Sbjct: 142 GDDGHKKHSGKDYDDGDEKSKKKEKEKKKDKKKDGNNS 179
>At2g27470.1 68415.m03320 CCAAT-box binding transcription factor
subunit HAP3-related contains Pfam PF00808 :
Histone-like transcription factor (CBF/NF-Y) and
archaeal histone; similar to polymerase epsilon p17
subunit (DNA polymerase epsilon subunit 3) (YB-like
protein 1) (YBL1) (NF-YB-like protein) (SP:Q9JKP7) [Mus
musculus];
Length = 275
Score = 34.3 bits (75), Expect = 0.062
Identities = 15/77 (19%), Positives = 35/77 (45%)
Frame = -2
Query: 237 EREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNKSFNDGD 58
E E ++ + E++ + +T + N N + +G DEE +++ N +G+
Sbjct: 172 ENGNDEEDENGNDEEDENDDENTEENGNDEENDDENTEENGNDEENEKEDEENSMEENGN 231
Query: 57 ASADYQTKSKKVEKNSA 7
S + + +E+N +
Sbjct: 232 ESEESGNEDHSMEENGS 248
Score = 31.1 bits (67), Expect = 0.58
Identities = 18/78 (23%), Positives = 33/78 (42%), Gaps = 1/78 (1%)
Frame = -2
Query: 243 TVEREKSESNKKSREFENKEAESSTYRDKNRSVN-SGSERKSSGKDEEYSEQNSSNKSFN 67
T E E N EN E + D+ S+ +G+E + SG ++ E+N S +
Sbjct: 194 TEENGNDEENDDENTEENGNDEENEKEDEENSMEENGNESEESGNEDHSMEENGSGVGED 253
Query: 66 DGDASADYQTKSKKVEKN 13
+ + ++VE +
Sbjct: 254 NENEDGSVSGSGEEVESD 271
Score = 29.5 bits (63), Expect = 1.8
Identities = 22/88 (25%), Positives = 37/88 (42%), Gaps = 3/88 (3%)
Frame = -2
Query: 255 ESGVTVEREKSESNKKSREFENKEAESSTYR--DKNRSVNSGSERKSSGKDEEYSEQNSS 82
E+G E E + + EN E + D+N N G++ ++ +DEE S + +
Sbjct: 172 ENGNDEEDENGNDEEDENDDENTEENGNDEENDDENTEEN-GNDEENEKEDEENSMEENG 230
Query: 81 NKSFNDGDASADYQTKSKKV-EKNSARD 1
N+S G+ + V E N D
Sbjct: 231 NESEESGNEDHSMEENGSGVGEDNENED 258
Score = 27.1 bits (57), Expect = 9.4
Identities = 17/74 (22%), Positives = 28/74 (37%)
Frame = -2
Query: 222 ESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNKSFNDGDASADY 43
E N E EN E D+N N E D+E +E+N +++ D
Sbjct: 171 EENGNDEEDENGNDEEDENDDENTEENGNDEEN----DDENTEENGNDEENEKEDEENSM 226
Query: 42 QTKSKKVEKNSARD 1
+ + E++ D
Sbjct: 227 EENGNESEESGNED 240
>At5g60030.1 68418.m07527 expressed protein
Length = 292
Score = 33.5 bits (73), Expect = 0.11
Identities = 28/103 (27%), Positives = 51/103 (49%), Gaps = 7/103 (6%)
Frame = -2
Query: 288 IRNEDRQA*WLESGVTVEREKSESNKKSREFE------NKEAESSTYRDKNRSVNSGSER 127
IR + +A +ES ER++ + KKS++ + N++ E+ ++ R ++
Sbjct: 97 IRYRNSEAVSVESVYGRERDEKKM-KKSKDADVVDEKVNEKLEAEQRSEERRERKKEKKK 155
Query: 126 KSSGKDEEYSEQNSSNKSFNDGDASAD-YQTKSKKVEKNSARD 1
K + KDE+ ++ K D SAD + K KK +KN+ D
Sbjct: 156 KKNNKDEDVVDEKVKEK-LEDEQKSADRKERKKKKSKKNNDED 197
>At1g76780.1 68414.m08935 expressed protein ; expression supported by
MPSS
Length = 1871
Score = 33.5 bits (73), Expect = 0.11
Identities = 21/83 (25%), Positives = 38/83 (45%)
Frame = -2
Query: 252 SGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNKS 73
S +++ K E K + E E + + + S + E K S + E+Y++QN +
Sbjct: 1477 SSTKIQQTKDELEKPRKPSEISE-NHNIHEFMDSSQSQDIEEKGSDQAEKYAKQNKIQEV 1535
Query: 72 FNDGDASADYQTKSKKVEKNSAR 4
ND D +Y S++V A+
Sbjct: 1536 MNDEDKKEEYHI-SERVRNEMAK 1557
>At1g44910.1 68414.m05146 FF domain-containing protein / WW
domain-containing protein contains Pfam profiles PF01846:
FF domain, PF00397: WW domain
Length = 946
Score = 33.5 bits (73), Expect = 0.11
Identities = 19/79 (24%), Positives = 32/79 (40%), Gaps = 1/79 (1%)
Frame = -2
Query: 237 EREKSESNKKSR-EFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNKSFNDG 61
E+E+ +K R E E E E +DK R K GK+ E++ + +
Sbjct: 796 EKERKRDEEKVRKEKERDEKEKRKDKDKERREKEREREKEKGKERSKREESDGETAMDVS 855
Query: 60 DASADYQTKSKKVEKNSAR 4
+ D + K K ++ R
Sbjct: 856 EGHKDEKRKGKDRDRKHRR 874
>At5g60530.1 68418.m07590 late embryogenesis abundant
protein-related / LEA protein-related similar to late
embryogenesis abundant protein [Picea glauca] GI:1350543
Length = 439
Score = 33.1 bits (72), Expect = 0.14
Identities = 18/75 (24%), Positives = 35/75 (46%)
Frame = -2
Query: 255 ESGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNK 76
E ++EK + +K+ +E ++KE + +DK ERK + E+ + K
Sbjct: 69 EKAAKDKKEKEKKDKEEKEKKDKERKEKEKKDKLEKEKKDKERKEKERKEK-ERKAKEKK 127
Query: 75 SFNDGDASADYQTKS 31
+ +A+A Y+ S
Sbjct: 128 DKEESEAAARYRILS 142
Score = 28.7 bits (61), Expect = 3.1
Identities = 15/71 (21%), Positives = 28/71 (39%)
Frame = -2
Query: 222 ESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNKSFNDGDASADY 43
E KK +E K+ + +DK ERK K ++ ++ + +
Sbjct: 62 EQEKKDKEKAAKDKKEKEKKDKEEKEKKDKERKEKEKKDKLEKEKKDKERKEKERKEKER 121
Query: 42 QTKSKKVEKNS 10
+ K KK ++ S
Sbjct: 122 KAKEKKDKEES 132
>At3g62240.1 68416.m06992 zinc finger (C2H2 type) family protein
contains Pfam PF00096: Zinc finger, C2H2 type
Length = 812
Score = 33.1 bits (72), Expect = 0.14
Identities = 22/82 (26%), Positives = 41/82 (50%), Gaps = 4/82 (4%)
Frame = -2
Query: 243 TVEREKSESNKKSREFENKEAESSTYR-DKNRSVNSGSERKSSGKDEEYSEQNSSNK-SF 70
TV R +S N + E E + +TYR DK +S G++ S+G ++ + + ++
Sbjct: 701 TVRRLQSSQNPQEEEEEAISKDKNTYRSDKGKSQVVGTDSSSTGSKQQRKKTSKFHRVRL 760
Query: 69 NDGDASA--DYQTKSKKVEKNS 10
DG +A D +++ E+ S
Sbjct: 761 GDGSMAALLDLNNSTRESEQES 782
>At2g22100.1 68415.m02625 RNA recognition motif (RRM)-containing
protein similar to UBP1 interacting protein 1a
[Arabidopsis thaliana] GI:19574236; contains Pfam
profile: PF00076 RNA recognition motif (aka RRM, RBD, or
RNP domain)
Length = 382
Score = 33.1 bits (72), Expect = 0.14
Identities = 20/79 (25%), Positives = 37/79 (46%), Gaps = 1/79 (1%)
Frame = -2
Query: 237 EREKSESNKKSR-EFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNKSFNDG 61
ER+K + KK R E + +EAE R+K S S+ K K E+ +++ + +
Sbjct: 7 ERKKEKKEKKERKERKRREAEELAVREKKISKKHKSKSKEEEKPEKSKKKSKKYEEVEEE 66
Query: 60 DASADYQTKSKKVEKNSAR 4
+ S KK +++ +
Sbjct: 67 EKSPSPSPSPKKSKESKKK 85
>At1g56660.1 68414.m06516 expressed protein
Length = 522
Score = 33.1 bits (72), Expect = 0.14
Identities = 21/75 (28%), Positives = 32/75 (42%), Gaps = 1/75 (1%)
Frame = -2
Query: 225 SESNKKSREFENKEAESSTYR-DKNRSVNSGSERKSSGKDEEYSEQNSSNKSFNDGDASA 49
+E KK + E KE + ST + DK G K +DE + D +A
Sbjct: 260 AEEKKKKPDKEKKEKDESTEKEDKKLKGKKGKGEKPEKEDEGKKTKEHDATEQEMDDEAA 319
Query: 48 DYQTKSKKVEKNSAR 4
D++ KK K+ A+
Sbjct: 320 DHKEGKKKKNKDKAK 334
Score = 29.9 bits (64), Expect = 1.3
Identities = 17/76 (22%), Positives = 35/76 (46%), Gaps = 2/76 (2%)
Frame = -2
Query: 237 EREKSESNKKSREF--ENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNKSFND 64
E + +E KKS+ E++E + +DK ++ ++ +DEE + +S +
Sbjct: 407 EEDDTEEKKKSKVEGGESEEGKKKKKKDKKKNKKKDTKEPKMTEDEEEKKDDSKDVKIEG 466
Query: 63 GDASADYQTKSKKVEK 16
A + + K K +K
Sbjct: 467 SKAKEEKKDKDVKKKK 482
Score = 27.1 bits (57), Expect = 9.4
Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 6/66 (9%)
Frame = -2
Query: 255 ESGVTVEREKSESNKK----SREFENKEAESSTYRDKNRSVNSGSE-RKSSGKDE-EYSE 94
ESG + +K++ KK S+E E E E K SG+E +K K E + E
Sbjct: 143 ESGPEEKNKKADKEKKHEDVSQEKEELEEEDGKKNKKKEKDESGTEEKKKKPKKEKKQKE 202
Query: 93 QNSSNK 76
++ SN+
Sbjct: 203 ESKSNE 208
>At5g16780.1 68418.m01965 SART-1 family protein contains Pfam
domain, PF03343: SART-1 family
Length = 820
Score = 32.7 bits (71), Expect = 0.19
Identities = 20/67 (29%), Positives = 30/67 (44%), Gaps = 1/67 (1%)
Frame = -2
Query: 255 ESGVTVEREKSESNKKSRE-FENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSN 79
E ++ R+K KSR+ + K+ E R K+R N K KD ++ +S
Sbjct: 75 EKEISRGRDKEREKDKSRDRVKEKDKEKERNRHKDRE-NERDNEKEKDKDRARVKERASK 133
Query: 78 KSFNDGD 58
KS D D
Sbjct: 134 KSHEDDD 140
Score = 31.9 bits (69), Expect = 0.33
Identities = 19/77 (24%), Positives = 41/77 (53%), Gaps = 6/77 (7%)
Frame = -2
Query: 237 EREKSESNKKSREFENKEAESSTYRDKNRS-VNSGSERKSSGKDEEYSE-----QNSSNK 76
E++K + + ++ EN E ++ +DK+R+ V + +KS D+E + ++S N+
Sbjct: 97 EKDKEKERNRHKDREN-ERDNEKEKDKDRARVKERASKKSHEDDDETHKAAERYEHSDNR 155
Query: 75 SFNDGDASADYQTKSKK 25
N+G + D + K+
Sbjct: 156 GLNEGGDNVDAASSGKE 172
Score = 28.3 bits (60), Expect = 4.1
Identities = 16/80 (20%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Frame = -2
Query: 237 EREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERK-SSGKDEEYSEQNSSNKSFNDG 61
++EK +K R+ +++ + RD+ RS + +E++ S G+D+E + S ++
Sbjct: 41 DKEKDYDREKIRDKDHRR-DKEKERDRKRSRDEDTEKEISRGRDKEREKDKSRDRVKEKD 99
Query: 60 DASADYQTKSKKVEKNSARD 1
+ K ++ E+++ ++
Sbjct: 100 KEKERNRHKDRENERDNEKE 119
>At4g37820.1 68417.m05351 expressed protein Kaposi's
sarcoma-associated herpes-like virus ORF73gene, Kaposi's
sarcoma-associated herpesvirus, U52064
Length = 532
Score = 32.7 bits (71), Expect = 0.19
Identities = 22/77 (28%), Positives = 35/77 (45%), Gaps = 5/77 (6%)
Frame = -2
Query: 231 EKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDE---EYSEQNSSNKSFNDG 61
E+ E K E KEAE + + N N+G K + E E S + + ++
Sbjct: 109 EREEEEKAVEENNEKEAEGTGNEEGNEDSNNGESEKVVDESEGGNEISNEEAREINYKGD 168
Query: 60 DASAD--YQTKSKKVEK 16
DAS++ + T+ K EK
Sbjct: 169 DASSEVMHGTEEKSNEK 185
Score = 28.7 bits (61), Expect = 3.1
Identities = 18/81 (22%), Positives = 40/81 (49%)
Frame = -2
Query: 243 TVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNKSFND 64
T E+ S+SN + E + ++ + + S SGS KS+G + +E++ K +
Sbjct: 247 TGEKGFSDSNGELPETNLSTSNATETTESSGSDESGSSGKSTGYQQTKNEEDEKEKVQSS 306
Query: 63 GDASADYQTKSKKVEKNSARD 1
+ S ++ + + +S++D
Sbjct: 307 EEESKVKESGKNEKDASSSQD 327
Score = 28.7 bits (61), Expect = 3.1
Identities = 19/74 (25%), Positives = 35/74 (47%)
Frame = -2
Query: 237 EREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNKSFNDGD 58
E S+ + +E E KE E S+ ++ N N +E+KSS + + E +S K +
Sbjct: 378 EASSSQEENEIKETEIKEKEESSSQEGNE--NKETEKKSS--ESQRKENTNSEKKIEQVE 433
Query: 57 ASADYQTKSKKVEK 16
++ T+ +K
Sbjct: 434 STDSSNTQKGDEQK 447
>At3g59800.1 68416.m06673 expressed protein
Length = 186
Score = 32.7 bits (71), Expect = 0.19
Identities = 18/60 (30%), Positives = 32/60 (53%)
Frame = -2
Query: 255 ESGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNK 76
E + + + ++ S+ KSR+ + K+ +S + K R S SE SS ++E SS+K
Sbjct: 90 ERSLKLSKGRNYSSDKSRK-DKKDRDSKKKKSKKRKHYSSSESSSSSDEDESRRSRSSSK 148
>At5g16680.1 68418.m01951 PHD finger family protein contains Pfam
domain, PF00628: PHD-finger
Length = 1290
Score = 32.3 bits (70), Expect = 0.25
Identities = 21/63 (33%), Positives = 28/63 (44%)
Frame = -2
Query: 240 VEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNKSFNDG 61
V EK +KSR NKE + + RS E + GK + S NSS S ++
Sbjct: 218 VSSEKGNFKEKSRPGGNKERQEPSVEGSTRS----GENRKDGKSSKSSSSNSSAVSESES 273
Query: 60 DAS 52
D S
Sbjct: 274 DDS 276
>At5g63550.1 68418.m07976 expressed protein
Length = 530
Score = 31.9 bits (69), Expect = 0.33
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = -3
Query: 356 DDSDKNRGKDTDDKYSETGTNKSSETKTGKRDGSRAASQSKGKNPNPT 213
++SD + DTDD+ E K S+ K+ + +S SKGK+ P+
Sbjct: 315 EESDHEK-TDTDDEKDEVEVEKPSKKKSSSKKTVEESSGSKGKDKQPS 361
>At5g61150.1 68418.m07671 leo1-like family protein weak similarity
to SP|P38439 LEO1 protein {Saccharomyces cerevisiae};
contains Pfam profile PF04004: Leo1-like protein;
supporting cDNA gi|21929714|gb|AF490422.1|
Length = 625
Score = 31.9 bits (69), Expect = 0.33
Identities = 18/78 (23%), Positives = 35/78 (44%)
Frame = -2
Query: 237 EREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNKSFNDGD 58
+ E SES ++ E+E +E E + R +S E + +++E S+ S D +
Sbjct: 516 QMEYSESEREESEYETEEEEEEKSPARGRGKDSEDEYEEDAEEDEEERGKSNRYSDEDEE 575
Query: 57 ASADYQTKSKKVEKNSAR 4
+++K + S R
Sbjct: 576 EEEVAGGRAEKDHRGSGR 593
Score = 30.7 bits (66), Expect = 0.77
Identities = 20/63 (31%), Positives = 31/63 (49%)
Frame = -2
Query: 285 RNEDRQA*WLESGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDE 106
R +D + + E E E+ +SN+ S E E +E + +K+ SG +RK DE
Sbjct: 544 RGKDSEDEYEEDAEEDEEERGKSNRYSDEDEEEEEVAGGRAEKDHR-GSGRKRKGIESDE 602
Query: 105 EYS 97
E S
Sbjct: 603 EES 605
>At4g36690.3 68417.m05206 U2 snRNP auxiliary factor large subunit,
putative similar to U2 snRNP auxiliary factor, large
subunit [Nicotiana plumbaginifolia] GI:3850823
Length = 565
Score = 31.9 bits (69), Expect = 0.33
Identities = 27/104 (25%), Positives = 51/104 (49%), Gaps = 1/104 (0%)
Frame = -2
Query: 309 RDRNQ*IIRNEDRQA*WLESGVTVEREK-SESNKKSREFENKEAESSTYRDKNRSVNSGS 133
RD + R++DR+ E G +RE+ SE +++SR+ + ++++ + RDK+R
Sbjct: 42 RDHERETSRSKDRER---EKGRDKDRERDSEVSRRSRDRDGEKSKERS-RDKDRDHRERH 97
Query: 132 ERKSSGKDEEYSEQNSSNKSFNDGDASADYQTKSKKVEKNSARD 1
R S +D + D D DY+ +S+ + + RD
Sbjct: 98 HRSSRHRDHSRERGERRERGGRDDD---DYR-RSRDRDHDRRRD 137
Score = 31.5 bits (68), Expect = 0.44
Identities = 18/81 (22%), Positives = 37/81 (45%), Gaps = 3/81 (3%)
Frame = -2
Query: 237 EREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEE---YSEQNSSNKSFN 67
E+ K S K R+ + SS +RD +R G R+ G+D++ S ++ +
Sbjct: 80 EKSKERSRDKDRDHRERHHRSSRHRDHSRE--RGERRERGGRDDDDYRRSRDRDHDRRRD 137
Query: 66 DGDASADYQTKSKKVEKNSAR 4
D +++S+ +++ R
Sbjct: 138 DRGGRRSRRSRSRSKDRSERR 158
>At4g36690.2 68417.m05207 U2 snRNP auxiliary factor large subunit,
putative similar to U2 snRNP auxiliary factor, large
subunit [Nicotiana plumbaginifolia] GI:3850823
Length = 542
Score = 31.9 bits (69), Expect = 0.33
Identities = 27/104 (25%), Positives = 51/104 (49%), Gaps = 1/104 (0%)
Frame = -2
Query: 309 RDRNQ*IIRNEDRQA*WLESGVTVEREK-SESNKKSREFENKEAESSTYRDKNRSVNSGS 133
RD + R++DR+ E G +RE+ SE +++SR+ + ++++ + RDK+R
Sbjct: 42 RDHERETSRSKDRER---EKGRDKDRERDSEVSRRSRDRDGEKSKERS-RDKDRDHRERH 97
Query: 132 ERKSSGKDEEYSEQNSSNKSFNDGDASADYQTKSKKVEKNSARD 1
R S +D + D D DY+ +S+ + + RD
Sbjct: 98 HRSSRHRDHSRERGERRERGGRDDD---DYR-RSRDRDHDRRRD 137
Score = 31.5 bits (68), Expect = 0.44
Identities = 18/81 (22%), Positives = 37/81 (45%), Gaps = 3/81 (3%)
Frame = -2
Query: 237 EREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEE---YSEQNSSNKSFN 67
E+ K S K R+ + SS +RD +R G R+ G+D++ S ++ +
Sbjct: 80 EKSKERSRDKDRDHRERHHRSSRHRDHSRE--RGERRERGGRDDDDYRRSRDRDHDRRRD 137
Query: 66 DGDASADYQTKSKKVEKNSAR 4
D +++S+ +++ R
Sbjct: 138 DRGGRRSRRSRSRSKDRSERR 158
>At4g36690.1 68417.m05205 U2 snRNP auxiliary factor large subunit,
putative similar to U2 snRNP auxiliary factor, large
subunit [Nicotiana plumbaginifolia] GI:3850823
Length = 573
Score = 31.9 bits (69), Expect = 0.33
Identities = 27/104 (25%), Positives = 51/104 (49%), Gaps = 1/104 (0%)
Frame = -2
Query: 309 RDRNQ*IIRNEDRQA*WLESGVTVEREK-SESNKKSREFENKEAESSTYRDKNRSVNSGS 133
RD + R++DR+ E G +RE+ SE +++SR+ + ++++ + RDK+R
Sbjct: 42 RDHERETSRSKDRER---EKGRDKDRERDSEVSRRSRDRDGEKSKERS-RDKDRDHRERH 97
Query: 132 ERKSSGKDEEYSEQNSSNKSFNDGDASADYQTKSKKVEKNSARD 1
R S +D + D D DY+ +S+ + + RD
Sbjct: 98 HRSSRHRDHSRERGERRERGGRDDD---DYR-RSRDRDHDRRRD 137
Score = 31.5 bits (68), Expect = 0.44
Identities = 18/81 (22%), Positives = 37/81 (45%), Gaps = 3/81 (3%)
Frame = -2
Query: 237 EREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEE---YSEQNSSNKSFN 67
E+ K S K R+ + SS +RD +R G R+ G+D++ S ++ +
Sbjct: 80 EKSKERSRDKDRDHRERHHRSSRHRDHSRE--RGERRERGGRDDDDYRRSRDRDHDRRRD 137
Query: 66 DGDASADYQTKSKKVEKNSAR 4
D +++S+ +++ R
Sbjct: 138 DRGGRRSRRSRSRSKDRSERR 158
>At4g15030.1 68417.m02309 expressed protein
Length = 179
Score = 31.9 bits (69), Expect = 0.33
Identities = 17/58 (29%), Positives = 28/58 (48%)
Frame = -2
Query: 237 EREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNKSFND 64
E E+SESN+K ++ N+ S Y G RKS K E + +++F++
Sbjct: 114 EGERSESNEKKKQKRNRSQSHSEYDTDEEDRRKGKTRKS--KLESADREGKDDENFDE 169
>At4g35940.1 68417.m05113 expressed protein
Length = 451
Score = 31.5 bits (68), Expect = 0.44
Identities = 19/75 (25%), Positives = 32/75 (42%)
Frame = -2
Query: 237 EREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNKSFNDGD 58
E+ K E +K R + K+ + R + + ++ GK E SE+ S + +
Sbjct: 32 EKAKKEQRRKDRRSDKKDKKDKKERKEKKEKKEKKRKEREGK-EVGSEKRSHKRRRKEDG 90
Query: 57 ASADYQTKSKKVEKN 13
A D K K+ E N
Sbjct: 91 AKVDLFHKLKESEVN 105
>At5g12230.1 68418.m01435 expressed protein
Length = 221
Score = 31.1 bits (67), Expect = 0.58
Identities = 17/80 (21%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
Frame = -2
Query: 237 EREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNKSFNDGD 58
+R+K + +++ ++ ++K + S +DK++ + ++ ++S+++ K +DGD
Sbjct: 134 DRDK-DKDREHKKHKHKHKDRSKDKDKDKDRDRKKDKNGHHDSGDHSKKHHDKKRKHDGD 192
Query: 57 ASA-DYQTKSKKVEKNSARD 1
D Q K K+S D
Sbjct: 193 EDLNDVQRHKKNKHKSSKLD 212
>At3g03340.1 68416.m00332 LUC7 N_terminus domain-containing protein
contains Pfam domain PF03194: LUC7 N_terminus
Length = 402
Score = 31.1 bits (67), Expect = 0.58
Identities = 19/82 (23%), Positives = 41/82 (50%), Gaps = 5/82 (6%)
Frame = -2
Query: 231 EKSESNK-KSREFENKEAESSTYRDK----NRSVNSGSERKSSGKDEEYSEQNSSNKSFN 67
EK+ K +S+E +KE ESS R+K +R +R+S +D + ++ ++
Sbjct: 311 EKANIRKERSKERNSKERESSKDREKEQETSREHRRDYDRRSRDRDRHHDRDREQDRDYD 370
Query: 66 DGDASADYQTKSKKVEKNSARD 1
+ + +++S+ ++ RD
Sbjct: 371 RSHSRSRRRSRSRSRSRDRPRD 392
>At1g03530.1 68414.m00334 expressed protein similar to hypothetical
protein GB:O14360
Length = 797
Score = 31.1 bits (67), Expect = 0.58
Identities = 17/54 (31%), Positives = 28/54 (51%)
Frame = -2
Query: 231 EKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNKSF 70
EKS+ K + E+E+S+ + S +S SE + S +DE E+N + F
Sbjct: 233 EKSDEAKGEMDSAESESETSS-SSASSSDSSSSEEEESDEDESDKEENKKEEKF 285
>At5g58880.1 68418.m07377 hypothetical protein
Length = 1088
Score = 30.7 bits (66), Expect = 0.77
Identities = 24/78 (30%), Positives = 40/78 (51%)
Frame = -2
Query: 240 VEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNKSFNDG 61
+E E + +++ KEA T D ++SV S RKS K+ E +++ SNK D
Sbjct: 369 LENEYIDHTEQNLPLNGKEA---TIEDDDKSVVS---RKSEEKEVEMNDETDSNKEECD- 421
Query: 60 DASADYQTKSKKVEKNSA 7
D+S +++S+ N A
Sbjct: 422 DSSCSEESESELCRLNKA 439
>At5g56360.1 68418.m07034 calmodulin-binding protein similar to
alpha glucosidase II beta subunit from GI:2104691 [Mus
musculus]
Length = 647
Score = 30.7 bits (66), Expect = 0.77
Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
Frame = -2
Query: 186 EAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSN---KSFNDGDASADYQTKSKKVE 19
E E ++ D+ N E K+E S ++SS+ +S NDG A + + KKVE
Sbjct: 281 EGEPTSILDEATHTNPADEHVVERKEESTSSEDSSSPTDESQNDGSAEKEESDEVKKVE 339
>At3g50670.1 68416.m05542 U1 small nuclear ribonucleoprotein 70
(U1-70k)
Length = 427
Score = 30.7 bits (66), Expect = 0.77
Identities = 14/59 (23%), Positives = 30/59 (50%)
Frame = -2
Query: 234 REKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNKSFNDGD 58
REK + ++SRE +++ + RD+ R +R G+D + + +++ + GD
Sbjct: 269 REKGKERERSRELSHEQPRERS-RDRPREDKHHRDRDQGGRDRDRDSRRDRDRTRDRGD 326
>At3g23900.1 68416.m03003 RNA recognition motif (RRM)-containing
protein
Length = 987
Score = 30.7 bits (66), Expect = 0.77
Identities = 19/78 (24%), Positives = 32/78 (41%)
Frame = -2
Query: 252 SGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNKS 73
+G R + E R+ E + + T R ++RSV ++ K +DEE ++S
Sbjct: 628 AGSRSPRRRKEVKSTPRDDEENKVKRRT-RSRSRSVEDSADIKDKSRDEELKHHKKRSRS 686
Query: 72 FNDGDASADYQTKSKKVE 19
+ D S T E
Sbjct: 687 RSREDRSKTRDTSRNSDE 704
Score = 27.1 bits (57), Expect = 9.4
Identities = 20/73 (27%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Frame = -2
Query: 234 REKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNKSFNDG-D 58
+E SE ++ R+ ++ E + R +RS E KS+ +D+E ++ +S + +
Sbjct: 605 QEDSELSRLRRDSSSR-GEKKSSRAGSRSPRRRKEVKSTPRDDEENKVKRRTRSRSRSVE 663
Query: 57 ASADYQTKSKKVE 19
SAD + KS+ E
Sbjct: 664 DSADIKDKSRDEE 676
>At5g25060.1 68418.m02970 RNA recognition motif (RRM)-containing
protein KIAA0332 - Homo sapiens, EMBL:AB002330
Length = 946
Score = 30.3 bits (65), Expect = 1.0
Identities = 18/78 (23%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Frame = -2
Query: 231 EKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYS-EQNSSNKSFNDGDA 55
+KS +K + +++E+ +R +N+S RKSS ++ ++ ++ + D D
Sbjct: 851 QKSIIERKEKREDSQESSKKRHRGENKS--QSPPRKSSTRERDHDLGRDRDRERHRDRDR 908
Query: 54 SADYQTKSKKVEKNSARD 1
D + EK+S+ D
Sbjct: 909 QHDLNRDRDRREKSSSHD 926
Score = 28.7 bits (61), Expect = 3.1
Identities = 20/88 (22%), Positives = 41/88 (46%), Gaps = 1/88 (1%)
Frame = -2
Query: 306 DRNQ*-IIRNEDRQA*WLESGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSE 130
+RNQ II ++++ ES R +++S R+ +E + RD++R + +
Sbjct: 848 NRNQKSIIERKEKREDSQESSKKRHRGENKSQSPPRKSSTRERDHDLGRDRDRERHRDRD 907
Query: 129 RKSSGKDEEYSEQNSSNKSFNDGDASAD 46
R+ + + SS+ +D D S +
Sbjct: 908 RQHDLNRDRDRREKSSSHDRDDNDRSKE 935
>At3g60110.1 68416.m06712 DNA-binding bromodomain-containing protein
contains bromodomain, INTERPRO:IPR001487
Length = 438
Score = 30.3 bits (65), Expect = 1.0
Identities = 19/79 (24%), Positives = 34/79 (43%), Gaps = 1/79 (1%)
Frame = -2
Query: 243 TVEREKSESNKKSREFENKEAESSTYRDKNR-SVNSGSERKSSGKDEEYSEQNSSNKSFN 67
T S + S+E ++ T R KN + ++ +SS D++ E+NS +
Sbjct: 262 TATTSARSSRRTSKEIAVVAKDTKTGRAKNNIKKQTDTKTESSDDDDDEKEENSKTEKKT 321
Query: 66 DGDASADYQTKSKKVEKNS 10
D K+++KNS
Sbjct: 322 VADKKKSVADFLKRIKKNS 340
>At5g53440.1 68418.m06641 expressed protein
Length = 1181
Score = 29.9 bits (64), Expect = 1.3
Identities = 15/65 (23%), Positives = 27/65 (41%)
Frame = -2
Query: 234 REKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNKSFNDGDA 55
R++ +++ R + ++ S Y + S ER + +Q+ K DG
Sbjct: 367 RDRDRDHERDRTHDREKDRSRDYYHDGKRSKSDRERDNDRDVSRLDDQSGRYKDRRDGRR 426
Query: 54 SADYQ 40
S DYQ
Sbjct: 427 SPDYQ 431
Score = 28.7 bits (61), Expect = 3.1
Identities = 19/54 (35%), Positives = 25/54 (46%), Gaps = 2/54 (3%)
Frame = -3
Query: 365 TGSDDSDKNRGKDTDDKYSETGTNKSSETKTGKRD--GSRAASQSKGKNPNPTR 210
+G SD+ GKD DDK + K S K+ KRD +S GK+ R
Sbjct: 80 SGESGSDRWNGKD-DDKGESSKKTKVSSEKSRKRDEGDGEETKKSSGKSDGKHR 132
Score = 28.3 bits (60), Expect = 4.1
Identities = 20/82 (24%), Positives = 37/82 (45%), Gaps = 6/82 (7%)
Frame = -2
Query: 231 EKSESNKKSREFENKEAESSTYRDKNRSVNSGSER------KSSGKDEEYSEQNSSNKSF 70
E + S+ K R+ ++ E+ S + K+ S++ KS +DE E+ +
Sbjct: 67 EYTSSSSKRRKGKSGESGSDRWNGKDDDKGESSKKTKVSSEKSRKRDEGDGEETKKSSGK 126
Query: 69 NDGDASADYQTKSKKVEKNSAR 4
+DG + +SK V+K R
Sbjct: 127 SDGKHRESSRRESKDVDKEKDR 148
>At5g24290.2 68418.m02858 integral membrane family protein contains
Pfam domain PF01988: Integral membrane protein
Length = 534
Score = 29.9 bits (64), Expect = 1.3
Identities = 15/49 (30%), Positives = 27/49 (55%), Gaps = 3/49 (6%)
Frame = -3
Query: 356 DDSDKNRGKDT---DDKYSETGTNKSSETKTGKRDGSRAASQSKGKNPN 219
+D+D ++ +D + SETG+N+ SET + + +G+ S PN
Sbjct: 68 EDNDGSQAQDPIVLESTVSETGSNEESETGSNEENGNNWLESSSTNLPN 116
>At2g34300.1 68415.m04196 dehydration-responsive protein-related
similar to early-responsive to dehydration stress ERD3
protein [Arabidopsis thaliana] GI:15320410; contains
Pfam profile PF03141: Putative methyltransferase
Length = 770
Score = 29.9 bits (64), Expect = 1.3
Identities = 15/63 (23%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Frame = -2
Query: 231 EKSESNKKSREFENKEAESSTYRDKN-RSVNSGSERKSSGKDEEYSEQNSSNKSFNDGDA 55
EK+E+ ++ +E ++ + ++KN + V S S+ + + + E NKS DG+
Sbjct: 112 EKTEAGEERKESDDNNGDGDGEKEKNVKEVGSESDETTQKEKTQLEESTEENKS-EDGNG 170
Query: 54 SAD 46
+ +
Sbjct: 171 NEE 173
>At5g44690.1 68418.m05476 hypothetical protein
Length = 684
Score = 29.5 bits (63), Expect = 1.8
Identities = 25/67 (37%), Positives = 35/67 (52%), Gaps = 3/67 (4%)
Frame = -2
Query: 285 RNEDRQA*WLESGVTVEREKSESNKK---SREFENKEAESSTYRDKNRSVNSGSERKSSG 115
RNE+R+ E G ++E E+ SN + S ++E + T R R SG E KSS
Sbjct: 369 RNEERRK--KEEGKSMEIEEYRSNPQEVTSVVCLDREKDEETARQVFRE--SGKEEKSSQ 424
Query: 114 KDEEYSE 94
DEE S+
Sbjct: 425 NDEETSK 431
>At4g33740.2 68417.m04791 expressed protein
Length = 227
Score = 29.5 bits (63), Expect = 1.8
Identities = 19/82 (23%), Positives = 32/82 (39%), Gaps = 3/82 (3%)
Frame = -2
Query: 237 EREKSESNKKSREFENKEAES---STYRDKNRSVNSGSERKSSGKDEEYSEQNSSNKSFN 67
++ K E+ E E E E DKN+ +E E E + ++S N
Sbjct: 106 KKSKVENGNHEEEVEKDEEEEVAEDDEEDKNKQGEEVAEEDEEENKHEEDEIDEQDQSKN 165
Query: 66 DGDASADYQTKSKKVEKNSARD 1
GD D +T ++ E + +
Sbjct: 166 AGDTDKDDETLEEEKESGMSEN 187
>At4g33740.1 68417.m04790 expressed protein
Length = 227
Score = 29.5 bits (63), Expect = 1.8
Identities = 19/82 (23%), Positives = 32/82 (39%), Gaps = 3/82 (3%)
Frame = -2
Query: 237 EREKSESNKKSREFENKEAES---STYRDKNRSVNSGSERKSSGKDEEYSEQNSSNKSFN 67
++ K E+ E E E E DKN+ +E E E + ++S N
Sbjct: 106 KKSKVENGNHEEEVEKDEEEEVAEDDEEDKNKQGEEVAEEDEEENKHEEDEIDEQDQSKN 165
Query: 66 DGDASADYQTKSKKVEKNSARD 1
GD D +T ++ E + +
Sbjct: 166 AGDTDKDDETLEEEKESGMSEN 187
>At4g00990.1 68417.m00133 transcription factor jumonji (jmjC)
domain-containing protein contains Pfam domain, PF02373:
jmjC domain
Length = 840
Score = 29.5 bits (63), Expect = 1.8
Identities = 17/71 (23%), Positives = 37/71 (52%)
Frame = -2
Query: 237 EREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNKSFNDGD 58
+++ +E+ + +++ + E+S +N+S+ E K KD+ +E+ S+N S G
Sbjct: 576 QKKYAEAMLQKQQYSGQVKEASEL--ENKSMKEVDESKKDLKDKAANEEQSNNSSRPSGS 633
Query: 57 ASADYQTKSKK 25
A+ SK+
Sbjct: 634 GEAEKVIISKE 644
>At2g20280.1 68415.m02369 zinc finger (CCCH-type) family protein
contains Pfam domain, PF00642: Zinc finger
C-x8-C-x5-C-x3-H type (and similar)
Length = 371
Score = 29.5 bits (63), Expect = 1.8
Identities = 16/62 (25%), Positives = 32/62 (51%)
Frame = -2
Query: 237 EREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNKSFNDGD 58
ERE+ E+ +K++ NKEAE+ T + + S E +D++ + + ++ +
Sbjct: 296 EREQEETEQKAK---NKEAEAGTSKSSGDAEQSSKEVNEEEEDDDDDDDDLDMDELDELE 352
Query: 57 AS 52
AS
Sbjct: 353 AS 354
Score = 27.5 bits (58), Expect = 7.1
Identities = 15/49 (30%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Frame = -2
Query: 201 EFEN-KEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNKSFNDGD 58
E+E +E E + + KN+ +G+ KSSG E+ S++ + + +D D
Sbjct: 292 EYEREREQEETEQKAKNKEAEAGTS-KSSGDAEQSSKEVNEEEEDDDDD 339
>At5g64030.1 68418.m08039 dehydration-responsive protein-related
similar to early-responsive to dehydration stress ERD3
protein [Arabidopsis thaliana] GI:15320410; contains
Pfam profile PF03141: Putative methyltransferase
Length = 829
Score = 29.1 bits (62), Expect = 2.3
Identities = 18/72 (25%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Frame = -2
Query: 237 EREKSESNKKSREFENKEAESSTYRDKNRSVNSGS-ERKSSGKDEEYSEQNSSNKSFNDG 61
+ E ++N+K + E ++ E + + S + E+KS D++ S+ + NK+ N+
Sbjct: 162 DEENPDTNEKQTKPETEDNELGEDGENQKQFESDNGEKKSIDDDKKSSDDDKENKTGNE- 220
Query: 60 DASADYQTKSKK 25
D +TK++K
Sbjct: 221 ----DTETKTEK 228
>At4g37900.1 68417.m05360 glycine-rich protein
Length = 787
Score = 29.1 bits (62), Expect = 2.3
Identities = 16/46 (34%), Positives = 25/46 (54%)
Frame = -3
Query: 353 DSDKNRGKDTDDKYSETGTNKSSETKTGKRDGSRAASQSKGKNPNP 216
DSD+++GK D +S GT E G+R +A + ++G P P
Sbjct: 254 DSDRSKGKKLDTGFS--GTTAQWEETFGRRYW-KAGAMNRGNTPKP 296
>At3g51070.1 68416.m05592 dehydration-responsive protein-related
similar to early-responsive to dehydration stress ERD3
protein [Arabidopsis thaliana] GI:15320410; contains
Pfam profile PF03141: Putative methyltransferase
Length = 895
Score = 29.1 bits (62), Expect = 2.3
Identities = 16/71 (22%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Frame = -2
Query: 255 ESGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVN-SGSERKSSGKDEEYSEQNSSN 79
E+ E E+ + K +EFE ++ + RD++ G++ + G+ +E + N
Sbjct: 144 ENQTVQESEEGQMKKVVKEFEKEQKQQ---RDEDAGTQPKGTQGQEQGQGKEQPDVEQGN 200
Query: 78 KSFNDGDASAD 46
K + D++ D
Sbjct: 201 KQGQEQDSNTD 211
>At2g29210.1 68415.m03550 splicing factor PWI domain-containing
protein contains Pfam profile PF01480: PWI domain
Length = 878
Score = 29.1 bits (62), Expect = 2.3
Identities = 19/80 (23%), Positives = 34/80 (42%)
Frame = -2
Query: 240 VEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNKSFNDG 61
VE+E + + ++K+ +DKNR N S R+ D+ S +S +
Sbjct: 734 VEKEDNSDLDANLSCDSKDTIRHQIKDKNRRKNKRSSREEVSSDDNGS-SDSDVDDRKEA 792
Query: 60 DASADYQTKSKKVEKNSARD 1
+ K++K EK R+
Sbjct: 793 KRRRKEEKKTRKEEKKRRRE 812
>At2g12875.1 68415.m01402 hypothetical protein
Length = 325
Score = 29.1 bits (62), Expect = 2.3
Identities = 18/70 (25%), Positives = 35/70 (50%), Gaps = 2/70 (2%)
Frame = -2
Query: 228 KSESNKKSREFENK--EAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNKSFNDGDA 55
K+ + + S +NK EA DKN S + + ++EE SE+ + +DG+
Sbjct: 92 KATTEEPSSTEQNKAIEAVKEDKYDKNEEEKSEKDEQEKSEEEE-SEEEEKEEGNDDGEE 150
Query: 54 SADYQTKSKK 25
S++ T +++
Sbjct: 151 SSNDSTTTEE 160
>At1g70620.2 68414.m08137 cyclin-related contains weak similarity to
Swiss-Prot:P35662 cylicin I (Multiple-band polypeptide I)
[Bos taurus]
Length = 884
Score = 29.1 bits (62), Expect = 2.3
Identities = 20/85 (23%), Positives = 32/85 (37%), Gaps = 4/85 (4%)
Frame = -2
Query: 255 ESGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYS----EQN 88
+ G E+EK E + R EN + + + S+RKS + S
Sbjct: 789 DRGKRKEKEKEEERSRHRRAENSSKDKRRRSPTSNESSDDSKRKSRSRRRSVSPSPVRSR 848
Query: 87 SSNKSFNDGDASADYQTKSKKVEKN 13
S + ++S D + KS KN
Sbjct: 849 RKRSSPSSDESSDDSKRKSSSKRKN 873
>At1g70620.1 68414.m08138 cyclin-related contains weak similarity to
Swiss-Prot:P35662 cylicin I (Multiple-band polypeptide I)
[Bos taurus]
Length = 897
Score = 29.1 bits (62), Expect = 2.3
Identities = 20/85 (23%), Positives = 32/85 (37%), Gaps = 4/85 (4%)
Frame = -2
Query: 255 ESGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYS----EQN 88
+ G E+EK E + R EN + + + S+RKS + S
Sbjct: 759 DRGKRKEKEKEEERSRHRRAENSSKDKRRRSPTSNESSDDSKRKSRSRRRSVSPSPVRSR 818
Query: 87 SSNKSFNDGDASADYQTKSKKVEKN 13
S + ++S D + KS KN
Sbjct: 819 RKRSSPSSDESSDDSKRKSSSKRKN 843
>At1g56340.1 68414.m06476 calreticulin 1 (CRT1) identical to
calreticulin (crt1) GI:2052379 [Arabidopsis thaliana]
Length = 425
Score = 29.1 bits (62), Expect = 2.3
Identities = 19/61 (31%), Positives = 28/61 (45%), Gaps = 2/61 (3%)
Frame = -2
Query: 222 ESNKKSREFENKEA--ESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNKSFNDGDASA 49
E+ KK E E+K+A ES + N G + + K EE E + K + DA+
Sbjct: 364 EAEKKREEEESKDAPAESDAEEEAEDDDNEGDDSDNESKSEETKEAEET-KEAEETDAAH 422
Query: 48 D 46
D
Sbjct: 423 D 423
>At1g15340.1 68414.m01835 methyl-CpG-binding domain-containing
protein contains Pfam profile PF01429: Methyl-CpG
binding domain
Length = 384
Score = 29.1 bits (62), Expect = 2.3
Identities = 26/81 (32%), Positives = 36/81 (44%), Gaps = 2/81 (2%)
Frame = -2
Query: 237 EREKSESNKKSREFENKEAESSTYRDKNRSVN-SGSERKSSGKDEEYSEQNSSNKSFNDG 61
E EK + +K+ E ENKEAE RDK S+ SE + E +E+ S + D
Sbjct: 188 EAEKEKEGEKA-EAENKEAE--VVRDKKESMEVDTSELEKKAGSGEGAEEPSKVEGLKDT 244
Query: 60 D-ASADYQTKSKKVEKNSARD 1
+ A VEK A +
Sbjct: 245 EMKEAQEVVTEADVEKKPAEE 265
>At5g47690.1 68418.m05887 expressed protein
Length = 1638
Score = 28.7 bits (61), Expect = 3.1
Identities = 22/68 (32%), Positives = 31/68 (45%), Gaps = 4/68 (5%)
Frame = -2
Query: 246 VTVEREKSES-NKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEY---SEQNSSN 79
+++E EK ES NKK R + E S + +S + G K DEE E
Sbjct: 1531 LSLEHEKVESRNKKRRSSALPKTEYSGEAGEEKSESEGKSLKEGEDDEEVVNKEEDLQEA 1590
Query: 78 KSFNDGDA 55
K+ + GDA
Sbjct: 1591 KTESSGDA 1598
>At5g22320.1 68418.m02604 leucine-rich repeat family protein
contains leucine rich repeat (LRR) domains, Pfam:PF00560
Length = 452
Score = 28.7 bits (61), Expect = 3.1
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = -3
Query: 329 DTDDKYSETGTNKSSETKTGKRDGSRAASQSKGKN 225
DTDD+ + NKS+E + K D R S + K+
Sbjct: 274 DTDDETFDAYHNKSAEEEQSKEDRKRKKSSKRNKS 308
>At4g16630.1 68417.m02514 DEAD/DEAH box helicase, putative (RH28)
identical to cDNA DEAD box RNA helicase, RH28 GI:3776026
Length = 789
Score = 28.7 bits (61), Expect = 3.1
Identities = 14/82 (17%), Positives = 38/82 (46%)
Frame = -2
Query: 285 RNEDRQA*WLESGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDE 106
R+ D Q+ W + + + + + + + K +++ +R S+N E + +D
Sbjct: 65 RDADAQSPWDFASYSSSVGEEHARRHTTSIDEKISKAIQHRPVPISINEEEEEEEEEEDA 124
Query: 105 EYSEQNSSNKSFNDGDASADYQ 40
+E + + ++ D +A+Y+
Sbjct: 125 SDAETDKQEEYLSEDDEAAEYK 146
>At4g11560.1 68417.m01853 bromo-adjacent homology (BAH)
domain-containing protein contains Pfam profile PF01426:
BAH domain
Length = 587
Score = 28.7 bits (61), Expect = 3.1
Identities = 16/51 (31%), Positives = 26/51 (50%)
Frame = -2
Query: 237 EREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNS 85
+R K ++ K +FE KEA+ R K R N E + G D++ E+ +
Sbjct: 37 KRRKRKTVKLYEDFEEKEAD----RKKKRKGNKEDEDMAEGDDDQAEEETN 83
>At3g48120.1 68416.m05248 expressed protein
Length = 328
Score = 28.7 bits (61), Expect = 3.1
Identities = 15/58 (25%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Frame = -2
Query: 234 REKSESNKKSREFENKEAESSTY--RDKNRSVNSGSERKSSGKDEEYSEQNSSNKSFN 67
RE+ E +K R S+Y R++ RS + +ER++ D E +++ ++S +
Sbjct: 103 RERDERDKSHRRRSRSSERRSSYVDRERRRSRSRSAERRNRYGDRESRRRSNRSRSLS 160
Score = 28.7 bits (61), Expect = 3.1
Identities = 20/84 (23%), Positives = 45/84 (53%), Gaps = 4/84 (4%)
Frame = -2
Query: 240 VEREKSESNKKSREFENK--EAESSTYRDKNRSVNSGSERKS-SGKDEEYSEQNSSNKSF 70
V+RE+ S +S E N+ + ES +++RS++ ER+S E+ + + K +
Sbjct: 126 VDRERRRSRSRSAERRNRYGDRESRRRSNRSRSLSPRRERRSREDVKEKKPDYSRLIKGY 185
Query: 69 NDGDASADYQTKSK-KVEKNSARD 1
++ A+ + K K ++++ + +D
Sbjct: 186 DEMSAAEKVKAKMKLQLDETAEKD 209
>At1g67120.1 68414.m07636 midasin-related similar to Midasin
(MIDAS-containing protein) (Swiss-Prot:Q12019)
[Saccharomyces cerevisiae]; similar to Midasin
(MIDAS-containing protein) (Swiss-Prot:Q9NU22) [Homo
sapiens]; contains Prosite PS00017: ATP/GTP-binding site
motif A (P-loop)
Length = 5336
Score = 28.7 bits (61), Expect = 3.1
Identities = 20/74 (27%), Positives = 37/74 (50%), Gaps = 3/74 (4%)
Frame = -2
Query: 234 REKSESNKKSREFENKEAESSTYRDKNRSVNSGSER---KSSGKDEEYSEQNSSNKSFND 64
+E S S + + E++ +E + V S +E+ K KDEE E+N + K+
Sbjct: 4545 KEYSVSEDEEEDKEDEGSEDEPLDNGIGDVGSDAEKADEKPWNKDEEDEEENMNEKN-ES 4603
Query: 63 GDASADYQTKSKKV 22
G + D T+S+++
Sbjct: 4604 GPSIVDKDTRSREL 4617
>At1g29470.1 68414.m03605 dehydration-responsive protein-related
similar to early-responsive to dehydration stress ERD3
protein [Arabidopsis thaliana] GI:15320410; contains
Pfam profile PF03141: Putative methyltransferase
Length = 770
Score = 28.7 bits (61), Expect = 3.1
Identities = 17/72 (23%), Positives = 39/72 (54%)
Frame = -2
Query: 237 EREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNKSFNDGD 58
E++ + ++++ E + E S+ ++N+S +S +++G+ SE+N+ KS +
Sbjct: 135 EKDTESESDETKQKEKTQLEESS--EENKSEDSNGTEENAGE----SEENTEKKSEENAG 188
Query: 57 ASADYQTKSKKV 22
+ + KSK V
Sbjct: 189 ETEESTEKSKDV 200
Score = 27.5 bits (58), Expect = 7.1
Identities = 19/67 (28%), Positives = 30/67 (44%), Gaps = 1/67 (1%)
Frame = -2
Query: 255 ESGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNK 76
ES T ++EK++ + S E NK +S+ + +E+KS E E +K
Sbjct: 141 ESDETKQKEKTQLEESSEE--NKSEDSNGTEENAGESEENTEKKSEENAGETEESTEKSK 198
Query: 75 S-FNDGD 58
F GD
Sbjct: 199 DVFPAGD 205
>At1g01440.1 68414.m00059 extra-large G-protein-related weak
similarity to extra-large G-protein (AtXLG1)
(GI:3201682) [Arabidopsis thaliana]
Length = 664
Score = 28.7 bits (61), Expect = 3.1
Identities = 23/72 (31%), Positives = 36/72 (50%), Gaps = 6/72 (8%)
Frame = -2
Query: 225 SESNKKSREFENKEAESSTYRDKNRSVNS----GSER--KSSGKDEEYSEQNSSNKSFND 64
S + + R F+ ES+T +NR +S GS+R KSS K+EE +SS+K+
Sbjct: 14 SSRSDEDRGFKEDLNESATSPMRNRLDDSNSRPGSQRFVKSSRKEEETDSDSSSSKNTTT 73
Query: 63 GDASADYQTKSK 28
+ Y K +
Sbjct: 74 RNNPIQYTDKQQ 85
>At5g65770.1 68418.m08276 nuclear matrix constituent protein-related
low similarity to nuclear matrix constituent protein 1
(NMCP1) [Daucus carota] GI:2190187
Length = 1042
Score = 28.3 bits (60), Expect = 4.1
Identities = 18/36 (50%), Positives = 19/36 (52%)
Frame = -3
Query: 110 TRSTVNRTPVINPLTTAMHRLTTKPNLRRLKRILPE 3
T S R P I P T A +RLT PN R LK L E
Sbjct: 3 TSSRSERFP-ITPSTAATNRLTITPNSRVLKSPLTE 37
>At5g65490.1 68418.m08236 expressed protein similar to unknown
protein (dbj BAA75199.1)
Length = 643
Score = 28.3 bits (60), Expect = 4.1
Identities = 20/76 (26%), Positives = 39/76 (51%), Gaps = 5/76 (6%)
Frame = -2
Query: 234 REKSESNKKSREFENKEAESSTYRDKNRSV---NSGSERKSSGKD--EEYSEQNSSNKSF 70
+E S+ S ++ ++ +S +++ + + NS ERK+ GK+ E S +++ +F
Sbjct: 398 QEVPASDNDSWLYDGEDELNSVLQERQKEMEFYNSKKERKNKGKEKQEAGSSSDANMNNF 457
Query: 69 NDGDASADYQTKSKKV 22
+ GD S Q KV
Sbjct: 458 DLGDISKSMQQFMHKV 473
>At5g62750.1 68418.m07877 expressed protein predicted proteins,
Caenorhabditis elegans
Length = 124
Score = 28.3 bits (60), Expect = 4.1
Identities = 15/70 (21%), Positives = 31/70 (44%)
Frame = -2
Query: 222 ESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNKSFNDGDASADY 43
E+ +K + +NKE E + ++ ++ KD+ ++N + D + +
Sbjct: 3 ETEEKVKNHDNKEEE---HNKAEKAEKKEKKKDKDKKDKNEDDKNGGGEEGEDQEKKSKK 59
Query: 42 QTKSKKVEKN 13
+ K K EKN
Sbjct: 60 KDKKAKKEKN 69
>At5g16500.1 68418.m01928 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 636
Score = 28.3 bits (60), Expect = 4.1
Identities = 15/55 (27%), Positives = 25/55 (45%)
Frame = -2
Query: 237 EREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNKS 73
E+E+ ++KK +E E +S D N + E+ K E S +S + S
Sbjct: 418 EKEEESTSKKRQEQEETATDSDDESDSNSEKDQEEEQSQLEKARESSSSSSDSGS 472
Score = 27.1 bits (57), Expect = 9.4
Identities = 21/84 (25%), Positives = 39/84 (46%)
Frame = -2
Query: 255 ESGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNK 76
E T ++S+SN + + E + + S +SGSER+S DE + S
Sbjct: 432 EETATDSDDESDSNSEKDQEEEQSQLEKARESSSSSSDSGSERRSI--DETNATAQSLKI 489
Query: 75 SFNDGDASADYQTKSKKVEKNSAR 4
S++ + S++ + K K+S +
Sbjct: 490 SYS--NYSSEEEDNEKLSSKSSCK 511
>At4g24580.1 68417.m03522 pleckstrin homology (PH) domain-containing
protein-related / RhoGAP domain-containing protein
contains Pfam domain, PF00620: RhoGAP domain
Length = 902
Score = 28.3 bits (60), Expect = 4.1
Identities = 15/47 (31%), Positives = 23/47 (48%)
Frame = -2
Query: 144 NSGSERKSSGKDEEYSEQNSSNKSFNDGDASADYQTKSKKVEKNSAR 4
+ GS+ DEE +N SN S+++ AS D S + + AR
Sbjct: 445 DDGSQGSEDYTDEEEDLENESNGSYSESAASEDKYADSIDPDDHKAR 491
>At3g63400.2 68416.m07138 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein similar to cyclophylin
[Digitalis lanata] GI:1563719; contains Pfam profile
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type; contains AT-donor splice site at
intron 9
Length = 387
Score = 28.3 bits (60), Expect = 4.1
Identities = 13/42 (30%), Positives = 20/42 (47%)
Frame = -2
Query: 129 RKSSGKDEEYSEQNSSNKSFNDGDASADYQTKSKKVEKNSAR 4
R + E + SNK+F+ GD S +++K E N R
Sbjct: 179 RAHDAAEREKGKSKKSNKNFSPGDVSDREAKETRKKESNEKR 220
>At3g63400.1 68416.m07137 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein similar to cyclophylin
[Digitalis lanata] GI:1563719; contains Pfam profile
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type; contains AT-donor splice site at
intron 9
Length = 570
Score = 28.3 bits (60), Expect = 4.1
Identities = 13/42 (30%), Positives = 20/42 (47%)
Frame = -2
Query: 129 RKSSGKDEEYSEQNSSNKSFNDGDASADYQTKSKKVEKNSAR 4
R + E + SNK+F+ GD S +++K E N R
Sbjct: 179 RAHDAAEREKGKSKKSNKNFSPGDVSDREAKETRKKESNEKR 220
>At1g70505.1 68414.m08114 expressed protein
Length = 338
Score = 28.3 bits (60), Expect = 4.1
Identities = 18/52 (34%), Positives = 26/52 (50%)
Frame = -2
Query: 258 LESGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEE 103
L S V++ R +S N ++R + E TYR + NS + SSG D E
Sbjct: 149 LGSLVSIYRFRSPDNGENR-VSIVDEEQGTYRPPGNAENSNVFKSSSGHDRE 199
>At1g28400.1 68414.m03492 expressed protein similar to E6
(GI:1000090) [Gossypium barbadense]
Length = 335
Score = 28.3 bits (60), Expect = 4.1
Identities = 18/82 (21%), Positives = 37/82 (45%), Gaps = 4/82 (4%)
Frame = -2
Query: 234 REKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNKSFNDG-- 61
+E+ +N K+ E N + S+ + + E K E Y + +N+ FN+
Sbjct: 98 KEEFNNNNKNDEKVNSKTFSTPSLSETEESFNNYEENYPKKTENYGTKGYNNEEFNNNNN 157
Query: 60 --DASADYQTKSKKVEKNSARD 1
DA+ + + K ++N A++
Sbjct: 158 KYDANFKEEFNNNKYDENYAKE 179
>At1g21390.1 68414.m02676 expressed protein
Length = 248
Score = 28.3 bits (60), Expect = 4.1
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = -2
Query: 210 KSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYS 97
+ +E+ N+ +ESST R + S N+ +SS +DE+ S
Sbjct: 185 EDKEWWNRMSESSTKRSGSSSSNNSIRSRSSLRDEKSS 222
>At1g14040.1 68414.m01660 EXS family protein / ERD1/XPR1/SYG1 family
protein similar to PHO1 protein [Arabidopsis thaliana]
GI:20069032; contains Pfam profiles PF03105: SPX domain,
PF03124: EXS family
Length = 798
Score = 28.3 bits (60), Expect = 4.1
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = -3
Query: 323 DDKYSETGTNKSSETKTGKRDGSRAASQSKGKNPNP 216
DD+ E N++S TG D S+ +G P+P
Sbjct: 232 DDEEDEDEQNETSVVSTGAIDNETTTSRMRGARPSP 267
>At1g13190.1 68414.m01529 RNA recognition motif (RRM)-containing
protein
Length = 573
Score = 28.3 bits (60), Expect = 4.1
Identities = 25/84 (29%), Positives = 38/84 (45%), Gaps = 13/84 (15%)
Frame = -2
Query: 231 EKSESNKKSREFENKEAESSTYRDKNR-------SVNSGSERKSSGKDE-----EYSEQ- 91
E+ S E E +E E RDK R S NSG R S ++E EY +Q
Sbjct: 471 EEGGSEYGGYEDETQEKEEKPSRDKERATTERDWSENSGDRRHKSHREEKDSHREYKQQR 530
Query: 90 NSSNKSFNDGDASADYQTKSKKVE 19
+ + F+ G +S +++S+ E
Sbjct: 531 DRDSDEFDRGQSSLKSRSRSRMSE 554
>At5g01400.1 68418.m00053 expressed protein contains low similarity to
symplekin SP:Q92797 from [Homo sapiens]
Length = 1467
Score = 27.9 bits (59), Expect = 5.4
Identities = 14/45 (31%), Positives = 22/45 (48%)
Frame = -3
Query: 347 DKNRGKDTDDKYSETGTNKSSETKTGKRDGSRAASQSKGKNPNPT 213
D R + ++ + S G ++SS TG+ D S+ S P PT
Sbjct: 1370 DTGRSEMSESQSSPIGQSQSSPIGTGQSDMSQTPQVSDSSAPEPT 1414
>At4g25880.2 68417.m03722 pumilio/Puf RNA-binding domain-containing
protein contains Pfam profile:PF00806 Pumilio-family RNA
binding domains
Length = 852
Score = 27.9 bits (59), Expect = 5.4
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = -2
Query: 123 SSGKDEEYSEQNSSNKSFNDGDASADYQTKSKKV 22
SSG+ ++S NSSN N D S ++ S V
Sbjct: 169 SSGQTPQHSRSNSSNGEVNTADESGNFSELSDDV 202
>At4g25880.1 68417.m03721 pumilio/Puf RNA-binding domain-containing
protein contains Pfam profile:PF00806 Pumilio-family RNA
binding domains
Length = 861
Score = 27.9 bits (59), Expect = 5.4
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = -2
Query: 123 SSGKDEEYSEQNSSNKSFNDGDASADYQTKSKKV 22
SSG+ ++S NSSN N D S ++ S V
Sbjct: 169 SSGQTPQHSRSNSSNGEVNTADESGNFSELSDDV 202
>At3g58050.1 68416.m06471 expressed protein
Length = 1209
Score = 27.9 bits (59), Expect = 5.4
Identities = 17/71 (23%), Positives = 31/71 (43%), Gaps = 4/71 (5%)
Frame = -2
Query: 246 VTVERE----KSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSN 79
+T+E++ + E +K E E KE + S R+K + K GK+++ E + +
Sbjct: 523 ITLEKQVKLLEEEEKEKREEEERKEKKRSKEREKKLRKKERLKEKDKGKEKKNPECSDKD 582
Query: 78 KSFNDGDASAD 46
N D
Sbjct: 583 MLLNSSREEED 593
>At3g18810.1 68416.m02389 protein kinase family protein contains
Pfam PF00069: Protein kinase domain
Length = 700
Score = 27.9 bits (59), Expect = 5.4
Identities = 14/76 (18%), Positives = 33/76 (43%), Gaps = 1/76 (1%)
Frame = -2
Query: 225 SESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNKSFNDGDASAD 46
+++N + N + + +D N + N+ + ++G D + N +N N+ +
Sbjct: 82 NDNNNNNNGNNNNDNNNGNNKDNNNNGNNNNGNNNNGNDNNGNNNNGNNNDNNNQNNGGG 141
Query: 45 YQTKS-KKVEKNSARD 1
+S +NS R+
Sbjct: 142 SNNRSPPPPSRNSDRN 157
Score = 27.5 bits (58), Expect = 7.1
Identities = 11/49 (22%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
Frame = -3
Query: 362 GSDDSDKNRGKDTDDKYS-ETGTNKSSETKTGKRDGSRAASQSKGKNPN 219
G++++D N G + +D + G N + +D + + + G N N
Sbjct: 69 GNNNNDGNNGNNNNDNNNNNNGNNNNDNNNGNNKDNNNNGNNNNGNNNN 117
>At1g74830.1 68414.m08670 expressed protein contains Pfam profile
PF04576: Protein of unknown function, DUF593
Length = 542
Score = 27.9 bits (59), Expect = 5.4
Identities = 15/54 (27%), Positives = 27/54 (50%)
Frame = -2
Query: 225 SESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNKSFND 64
SE K+ E + EAE YR+K + + + EE+ +QN + +++D
Sbjct: 378 SELAKREEEMKELEAEFEVYREKYGCLTDQEDAR-----EEFHKQNGNASAYDD 426
>At1g60900.1 68414.m06856 U2 snRNP auxiliary factor large subunit,
putative similar to U2 snRNP auxiliary factor, large
subunit GB:CAA77136 from [Nicotiana plumbaginifolia]
Length = 589
Score = 27.9 bits (59), Expect = 5.4
Identities = 19/102 (18%), Positives = 40/102 (39%)
Frame = -2
Query: 309 RDRNQ*IIRNEDRQA*WLESGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSE 130
+D N+ R +DR E +REKS + RE +RD++R +
Sbjct: 60 KDGNKDRDREKDRDR---EKSRDRDREKSRDRDRDRERSKDRQRDRHHRDRHRDRSRERS 116
Query: 129 RKSSGKDEEYSEQNSSNKSFNDGDASADYQTKSKKVEKNSAR 4
K D+++ ++ D + + + + ++ +R
Sbjct: 117 EKRDDLDDDHHRRSRDRDRRRSRDRDREVRHRRRSRSRSRSR 158
>At5g64910.1 68418.m08165 expressed protein ; expression supported
by MPSS
Length = 487
Score = 27.5 bits (58), Expect = 7.1
Identities = 17/83 (20%), Positives = 28/83 (33%)
Frame = -2
Query: 255 ESGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNK 76
E V + E + EN+E E++ K E K+EE E +K
Sbjct: 53 EDKVESPAPEEEGKNEEEANENQEEEAAKVESKAAEEGGNEEEAKEDKEEEKEEAAREDK 112
Query: 75 SFNDGDASADYQTKSKKVEKNSA 7
+ D K+ K ++
Sbjct: 113 EEEEEAVKPDESASQKEEAKGAS 135
>At5g24290.1 68418.m02857 integral membrane family protein contains
Pfam domain PF01988: Integral membrane protein
Length = 550
Score = 27.5 bits (58), Expect = 7.1
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -3
Query: 311 SETGTNKSSETKTGKRDGSRAASQSKGKNPN 219
SETG+N+ SET + + +G+ S PN
Sbjct: 102 SETGSNEESETGSNEENGNNWLESSSTNLPN 132
>At5g08450.2 68418.m00996 expressed protein KED, Nicotiana tabacum,
EMBL:AB009883
Length = 918
Score = 27.5 bits (58), Expect = 7.1
Identities = 14/92 (15%), Positives = 42/92 (45%)
Frame = -2
Query: 288 IRNEDRQA*WLESGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKD 109
I E+R++ E ++++ + +K ++ +E + ++ +++ E + +
Sbjct: 394 IGREERESDRWERERMEQKDRERNKEKDKDHIKREPRTGAEKEISQNEKELGEASAKPSE 453
Query: 108 EEYSEQNSSNKSFNDGDASADYQTKSKKVEKN 13
+EY ++ D + +TK K+ E++
Sbjct: 454 QEYVAPEQKKQNEPDNCEKDERETKEKRRERD 485
>At5g08450.1 68418.m00995 expressed protein KED, Nicotiana tabacum,
EMBL:AB009883
Length = 918
Score = 27.5 bits (58), Expect = 7.1
Identities = 14/92 (15%), Positives = 42/92 (45%)
Frame = -2
Query: 288 IRNEDRQA*WLESGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKD 109
I E+R++ E ++++ + +K ++ +E + ++ +++ E + +
Sbjct: 394 IGREERESDRWERERMEQKDRERNKEKDKDHIKREPRTGAEKEISQNEKELGEASAKPSE 453
Query: 108 EEYSEQNSSNKSFNDGDASADYQTKSKKVEKN 13
+EY ++ D + +TK K+ E++
Sbjct: 454 QEYVAPEQKKQNEPDNCEKDERETKEKRRERD 485
>At4g24590.1 68417.m03523 expressed protein
Length = 241
Score = 27.5 bits (58), Expect = 7.1
Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
Frame = -2
Query: 141 SGSERKSSGKDEEYSEQNSSNKSFND-GDASAD--YQTKSKKVEKNSARD 1
+G E+ S ++EE E + S +D GD AD Y +VE N R+
Sbjct: 52 NGGEQSESPEEEEEEESDREEPSASDPGDPEADKFYDLIKSRVECNDFRE 101
>At2g43160.3 68415.m05361 epsin N-terminal homology (ENTH)
domain-containing protein contains Pfam PF01417: ENTH
domain. ENTH (Epsin N-terminal homology) domain; similar
to Af10-protein (GI:1724114) [Avena fatua]
Length = 895
Score = 27.5 bits (58), Expect = 7.1
Identities = 14/66 (21%), Positives = 34/66 (51%)
Frame = -2
Query: 201 EFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNKSFNDGDASADYQTKSKKV 22
++ +++ E S+Y + +R S +D + ++S ++ DG+ DY+ +S+ V
Sbjct: 180 DYGSRDEERSSYGREREYGYRDDDRNS--RDGDRHSRDSEDRYGRDGNRDDDYRGRSRSV 237
Query: 21 EKNSAR 4
+ +R
Sbjct: 238 DNYGSR 243
>At2g43160.2 68415.m05360 epsin N-terminal homology (ENTH)
domain-containing protein contains Pfam PF01417: ENTH
domain. ENTH (Epsin N-terminal homology) domain; similar
to Af10-protein (GI:1724114) [Avena fatua]
Length = 895
Score = 27.5 bits (58), Expect = 7.1
Identities = 14/66 (21%), Positives = 34/66 (51%)
Frame = -2
Query: 201 EFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNKSFNDGDASADYQTKSKKV 22
++ +++ E S+Y + +R S +D + ++S ++ DG+ DY+ +S+ V
Sbjct: 180 DYGSRDEERSSYGREREYGYRDDDRNS--RDGDRHSRDSEDRYGRDGNRDDDYRGRSRSV 237
Query: 21 EKNSAR 4
+ +R
Sbjct: 238 DNYGSR 243
>At2g43160.1 68415.m05359 epsin N-terminal homology (ENTH)
domain-containing protein contains Pfam PF01417: ENTH
domain. ENTH (Epsin N-terminal homology) domain; similar
to Af10-protein (GI:1724114) [Avena fatua]
Length = 895
Score = 27.5 bits (58), Expect = 7.1
Identities = 14/66 (21%), Positives = 34/66 (51%)
Frame = -2
Query: 201 EFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNKSFNDGDASADYQTKSKKV 22
++ +++ E S+Y + +R S +D + ++S ++ DG+ DY+ +S+ V
Sbjct: 180 DYGSRDEERSSYGREREYGYRDDDRNS--RDGDRHSRDSEDRYGRDGNRDDDYRGRSRSV 237
Query: 21 EKNSAR 4
+ +R
Sbjct: 238 DNYGSR 243
>At1g79280.1 68414.m09242 expressed protein weak similarity to
Nucleoprotein TPR (Swiss-Prot:P12270) [Homo sapiens]
Length = 2111
Score = 27.5 bits (58), Expect = 7.1
Identities = 22/72 (30%), Positives = 32/72 (44%)
Frame = -2
Query: 279 EDRQA*WLESGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEY 100
+DR A +S + +S +K E E E S R + E+K D E
Sbjct: 83 DDRLAELAQSQAQKHQLHLQSIEKDGEVERMSTEMSELHKSKRQLMELLEQK----DAEI 138
Query: 99 SEQNSSNKSFND 64
SE+NS+ KS+ D
Sbjct: 139 SEKNSTIKSYLD 150
>At1g69070.1 68414.m07903 expressed protein
Length = 901
Score = 27.5 bits (58), Expect = 7.1
Identities = 17/58 (29%), Positives = 29/58 (50%)
Frame = -2
Query: 261 WLESGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQN 88
W++ +ERE + N +S E E+ E+E D + + G E++ G E EQ+
Sbjct: 343 WIDD--VLEREDNVDNSESDEDEDSESEEE--EDDDGESDGGDEKQRKGHHLEDWEQS 396
>At1g56110.1 68414.m06443 nucleolar protein Nop56, putative similar
to XNop56 protein [Xenopus laevis] GI:14799394; contains
Pfam profile PF01798: Putative snoRNA binding domain
Length = 522
Score = 27.5 bits (58), Expect = 7.1
Identities = 15/73 (20%), Positives = 33/73 (45%)
Frame = -2
Query: 237 EREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNKSFNDGD 58
++ K E ++ E ++E ++K R + + E + S K + + + +DG
Sbjct: 451 KKAKGEEEEEVVAMEEDKSEKKKKKEK-RKMETAEENEKSEKKKTKKSKAGGEEETDDGH 509
Query: 57 ASADYQTKSKKVE 19
++ + KSK E
Sbjct: 510 STKKKKKKSKSAE 522
>At1g35330.1 68414.m04379 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 327
Score = 27.5 bits (58), Expect = 7.1
Identities = 11/29 (37%), Positives = 20/29 (68%)
Frame = -2
Query: 180 ESSTYRDKNRSVNSGSERKSSGKDEEYSE 94
++ + R+ RS + GSER+ GK++E+ E
Sbjct: 288 QARSSREGYRSGSVGSERRGKGKEKEFGE 316
>At1g19990.1 68414.m02504 expressed protein ; expression supported
by MPSS
Length = 251
Score = 27.5 bits (58), Expect = 7.1
Identities = 16/78 (20%), Positives = 36/78 (46%)
Frame = -2
Query: 237 EREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNKSFNDGD 58
E K+ K+ E +NK S + N+GS++ ++++ + N KS G
Sbjct: 5 EDVKAMKMKEEAEEDNKSLSSFAKKKPTNGNNAGSKKLKKEENDDDDDDNKPIKSSVSGS 64
Query: 57 ASADYQTKSKKVEKNSAR 4
+ + K ++++K+ +
Sbjct: 65 RAKPVK-KKEEIDKDDEK 81
>At1g19880.1 68414.m02493 regulator of chromosome condensation
(RCC1) family protein low similarity to UVB-resistance
protein UVR8 [Arabidopsis thaliana] GI:5478530; contains
Pfam profile PF00415: Regulator of chromosome
condensation (RCC1)
Length = 538
Score = 27.5 bits (58), Expect = 7.1
Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 3/45 (6%)
Frame = -3
Query: 356 DDSDKNR---GKDTDDKYSETGTNKSSETKTGKRDGSRAASQSKG 231
D+SDK + G D D YSE G E GK+ +R + +G
Sbjct: 471 DNSDKEKEVQGSDADSDYSEDG-----EEANGKKQSARGRGRGRG 510
>At5g66950.1 68418.m08440 expressed protein
Length = 870
Score = 27.1 bits (57), Expect = 9.4
Identities = 19/57 (33%), Positives = 27/57 (47%)
Frame = -2
Query: 234 REKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNKSFND 64
REKS+ N R N++ S R RSV+ G S DE+ E S+ ++D
Sbjct: 631 REKSQYNG-GRLLVNEDEHPSKRRVSFRSVDHGEASVISLGDEDEEEDGSNGVEWDD 686
>At5g61330.1 68418.m07696 rRNA processing protein-related contains
weak similarity to rRNA processing protein EBP2
(EBNA1-binding protein homolog) (Swiss-Prot:P36049)
[Saccharomyces cerevisiae]
Length = 436
Score = 27.1 bits (57), Expect = 9.4
Identities = 23/83 (27%), Positives = 32/83 (38%), Gaps = 4/83 (4%)
Frame = -2
Query: 255 ESGVTVEREKSESNKKSREFENKE---AESSTYRDKN-RSVNSGSERKSSGKDEEYSEQN 88
+ G T E ++ +S + E ENKE ES + D N + SG E KD + E
Sbjct: 60 DEGDTEEDDEGDSEEDD-EGENKEDEDGESEDFEDGNDKESESGDEGNDDNKDAQMEELE 118
Query: 87 SSNKSFNDGDASADYQTKSKKVE 19
K + K K E
Sbjct: 119 KEVKELRSQEQDILKNLKRDKGE 141
>At5g59730.1 68418.m07487 exocyst subunit EXO70 family protein
leucine zipper-containing protein, Lycopersicon
esculentum, PIR:S21495 contains Pfam domain PF03081:
Exo70 exocyst complex subunit;
Length = 634
Score = 27.1 bits (57), Expect = 9.4
Identities = 17/65 (26%), Positives = 28/65 (43%), Gaps = 1/65 (1%)
Frame = -2
Query: 240 VEREKSESNKKSREFENKEAES-STYRDKNRSVNSGSERKSSGKDEEYSEQNSSNKSFND 64
+E E K +RE+ + E S +YR S ++ + S + Y E F+
Sbjct: 102 LESEFHRVLKANREYLDPECVSVRSYRSSRFSTSTTTSVSDSEDESSYEENADEEHRFSG 161
Query: 63 GDASA 49
GD+ A
Sbjct: 162 GDSDA 166
>At5g55660.1 68418.m06940 expressed protein similar to unknown
protein (pir||T08929)
Length = 778
Score = 27.1 bits (57), Expect = 9.4
Identities = 22/74 (29%), Positives = 34/74 (45%), Gaps = 5/74 (6%)
Frame = -2
Query: 252 SGVTVEREKSESN----KKSREFENKEAES-STYRDKNRSVNSGSERKSSGKDEEYSEQN 88
SG V+ K E + K + E K+ E S DK V E+K G+D+E E +
Sbjct: 37 SGKEVQESKKEEDTGLEKMEIDDEGKQHEGESETGDKEVEVTE-EEKKDVGEDKEQPEAD 95
Query: 87 SSNKSFNDGDASAD 46
++ +D + AD
Sbjct: 96 KMDEDTDDKNLKAD 109
>At5g51410.2 68418.m06374 LUC7 N_terminus domain-containing protein
similar to cisplatin resistance-associated overexpressed
protein [Homo sapiens] GI:6899846; contains Pfam profile
PF03194: LUC7 N_terminus
Length = 334
Score = 27.1 bits (57), Expect = 9.4
Identities = 17/76 (22%), Positives = 31/76 (40%)
Frame = -2
Query: 228 KSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNKSFNDGDASA 49
K + ++ R KEA+ + K R S S+R S E Y +++ + D
Sbjct: 236 KDKGKEEERLVRGKEADD---KRKPREKESESKRSGSSDRERYRDRDRNRDGDRHRDRGR 292
Query: 48 DYQTKSKKVEKNSARD 1
DY+ + ++ D
Sbjct: 293 DYRKPYDRRSRSGRED 308
>At5g51410.1 68418.m06373 LUC7 N_terminus domain-containing protein
similar to cisplatin resistance-associated overexpressed
protein [Homo sapiens] GI:6899846; contains Pfam profile
PF03194: LUC7 N_terminus
Length = 334
Score = 27.1 bits (57), Expect = 9.4
Identities = 17/76 (22%), Positives = 31/76 (40%)
Frame = -2
Query: 228 KSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNKSFNDGDASA 49
K + ++ R KEA+ + K R S S+R S E Y +++ + D
Sbjct: 236 KDKGKEEERLVRGKEADD---KRKPREKESESKRSGSSDRERYRDRDRNRDGDRHRDRGR 292
Query: 48 DYQTKSKKVEKNSARD 1
DY+ + ++ D
Sbjct: 293 DYRKPYDRRSRSGRED 308
>At5g48610.1 68418.m06012 expressed protein ; expression supported
by MPSS
Length = 470
Score = 27.1 bits (57), Expect = 9.4
Identities = 15/65 (23%), Positives = 28/65 (43%)
Frame = -2
Query: 201 EFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNKSFNDGDASADYQTKSKKV 22
EF++K E +DK + + K KD++ + +K + D + K K +
Sbjct: 10 EFQDKYKEKKHKKDKEKREGKEKKSKDRSKDKQKERKEKKDKHKDQKDKEKG-KEKGKPL 68
Query: 21 EKNSA 7
E+ A
Sbjct: 69 EEKKA 73
>At5g44800.1 68418.m05492 chromodomain-helicase-DNA-binding family
protein / CHD family protein similar to chromatin
remodeling factor CHD3 (PICKLE) [Arabidopsis thaliana]
GI:6478518; contains Pfam profiles PF00271: Helicase
conserved C-terminal domain, PF00176: SNF2 family
N-terminal domain, PF00628: PHD-finger, PF00385: 'chromo'
(CHRromatin Organization MOdifier)
Length = 2228
Score = 27.1 bits (57), Expect = 9.4
Identities = 19/74 (25%), Positives = 34/74 (45%), Gaps = 1/74 (1%)
Frame = -2
Query: 231 EKSESNKKSREFENKEAESS-TYRDKNRSVNSGSERKSSGKDEEYSEQNSSNKSFNDGDA 55
EK +S +++ K + +YR+ SG +S G+DE+ E + G A
Sbjct: 1322 EKYQSEEEAALGRGKRLRKAVSYREAYAPHTSGPVNESGGEDEKEPEPELKKEYTPAGRA 1381
Query: 54 SADYQTKSKKVEKN 13
+ TK ++ +KN
Sbjct: 1382 LKEKFTKLRERQKN 1395
>At5g37010.1 68418.m04438 expressed protein
Length = 637
Score = 27.1 bits (57), Expect = 9.4
Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Frame = -2
Query: 207 SREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSE--QNSSNKSFNDGD 58
SRE ++ ++ S R++ S N G R+ S SE NSS S N +
Sbjct: 186 SRERDDSKSNRSGSRERGSSGNGGGSRRVSRSPGRRSEINPNSSGNSVNSSN 237
>At5g08610.1 68418.m01024 DEAD box RNA helicase (RH26) strong
similarity to RNA helicase RH26 [Arabidopsis thaliana]
GI:3776025; contains Pfam profiles PF00270: DEAD/DEAH
box helicase, PF00271: Helicase conserved C-terminal
domain; identical to cDNA DEAD box RNA helicase, RH26
GI:3776024
Length = 850
Score = 27.1 bits (57), Expect = 9.4
Identities = 18/79 (22%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Frame = -2
Query: 240 VEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNKSFNDG 61
V+ + SES+ + R N ++ SS +++V+SGS + S + +S +
Sbjct: 189 VQGKSSESSFRGRSDRNVDSGSSFRGRSDKNVDSGSSFRGRNDRNVDSGSSFRGRSDRNV 248
Query: 60 DASADYQTKS-KKVEKNSA 7
D+ + ++ +S + V+ S+
Sbjct: 249 DSGSSFRGRSDRNVDSGSS 267
>At5g03680.1 68418.m00327 trihelix DNA-binding protein, putative
similar to DNA-binding protein DF1 [Pisum sativum]
GI:13646986
Length = 591
Score = 27.1 bits (57), Expect = 9.4
Identities = 15/75 (20%), Positives = 35/75 (46%)
Frame = -2
Query: 261 WLESGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSS 82
W+ +G+ +EK + NKK ++ + ++N N+ + + +EQ +
Sbjct: 480 WISNGM--RKEKKQINKKRKDNSSSCGVYYPRNEENPIYNNRESGYNDNDPHQINEQGNV 537
Query: 81 NKSFNDGDASADYQT 37
S ++ +A+A+ T
Sbjct: 538 GSSTSNANANANVTT 552
>At4g37210.2 68417.m05267 tetratricopeptide repeat (TPR)-containing
protein low similarity to SP|Q02508 Protein HGV2
Halocynthia roretzi; contains Pfam profile PF00515 TPR
Domain
Length = 377
Score = 27.1 bits (57), Expect = 9.4
Identities = 16/63 (25%), Positives = 29/63 (46%)
Frame = -2
Query: 234 REKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNKSFNDGDA 55
+++ E ++S E+ A S D R +S + S GKD+ ++ + +D D
Sbjct: 148 KKEGEVQQESSNGESL-APSVVSGDPERQGSSSGQEGSGGKDQGEDGEDCQDDDLSDADG 206
Query: 54 SAD 46
AD
Sbjct: 207 DAD 209
>At4g37210.1 68417.m05268 tetratricopeptide repeat (TPR)-containing
protein low similarity to SP|Q02508 Protein HGV2
Halocynthia roretzi; contains Pfam profile PF00515 TPR
Domain
Length = 492
Score = 27.1 bits (57), Expect = 9.4
Identities = 16/63 (25%), Positives = 29/63 (46%)
Frame = -2
Query: 234 REKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNKSFNDGDA 55
+++ E ++S E+ A S D R +S + S GKD+ ++ + +D D
Sbjct: 148 KKEGEVQQESSNGESL-APSVVSGDPERQGSSSGQEGSGGKDQGEDGEDCQDDDLSDADG 206
Query: 54 SAD 46
AD
Sbjct: 207 DAD 209
>At4g29060.1 68417.m04157 elongation factor Ts family protein
similar to SP|P35019 Elongation factor Ts (EF-Ts)
{Galdieria sulphuraria}; contains Pfam profiles PF00627:
UBA/TS-N domain, PF00889: Elongation factor TS, PF00575:
S1 RNA binding domain
Length = 953
Score = 27.1 bits (57), Expect = 9.4
Identities = 12/38 (31%), Positives = 16/38 (42%)
Frame = -3
Query: 332 KDTDDKYSETGTNKSSETKTGKRDGSRAASQSKGKNPN 219
++ DD GKRDGS+ Q KG+ N
Sbjct: 205 RENDDPPKRQSGGSDKPRSGGKRDGSKGGGQRKGEGFN 242
>At3g45090.2 68416.m04862 2-phosphoglycerate kinase-related contains
weak similarity to 2-phosphoglycerate kinase (GI:467751)
[Methanothermus fervidus]
Length = 698
Score = 27.1 bits (57), Expect = 9.4
Identities = 17/76 (22%), Positives = 32/76 (42%), Gaps = 1/76 (1%)
Frame = -2
Query: 237 EREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNKSF-NDG 61
+ + E + E ++ E S ++NR + +S+ DEEY + +KS+ D
Sbjct: 541 DEDDEEGDDDFHEPDSDEDLSDNNDERNRDEIGSVDEESTKSDEEYDDLAMEDKSYWTDN 600
Query: 60 DASADYQTKSKKVEKN 13
+ T S + N
Sbjct: 601 EEEESRDTISMVSQNN 616
>At3g45090.1 68416.m04863 2-phosphoglycerate kinase-related contains
weak similarity to 2-phosphoglycerate kinase (GI:467751)
[Methanothermus fervidus]
Length = 717
Score = 27.1 bits (57), Expect = 9.4
Identities = 17/76 (22%), Positives = 32/76 (42%), Gaps = 1/76 (1%)
Frame = -2
Query: 237 EREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNKSF-NDG 61
+ + E + E ++ E S ++NR + +S+ DEEY + +KS+ D
Sbjct: 560 DEDDEEGDDDFHEPDSDEDLSDNNDERNRDEIGSVDEESTKSDEEYDDLAMEDKSYWTDN 619
Query: 60 DASADYQTKSKKVEKN 13
+ T S + N
Sbjct: 620 EEEESRDTISMVSQNN 635
>At3g11590.1 68416.m01416 expressed protein
Length = 622
Score = 27.1 bits (57), Expect = 9.4
Identities = 13/49 (26%), Positives = 24/49 (48%)
Frame = -2
Query: 216 NKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNKSF 70
N+++ ++ N +Y ++ V +G+E S D E N NKS+
Sbjct: 461 NEEAGDYLNHHISFGSYNIEDGEVENGNEEGSGESDLHSIELNIDNKSY 509
>At2g39260.1 68415.m04821 MIF4G domain-containing protein similar to
hUPF2 [Homo sapiens] GI:12232320; contains Pfam profile
PF02854: MIF4G domain
Length = 1186
Score = 27.1 bits (57), Expect = 9.4
Identities = 18/67 (26%), Positives = 34/67 (50%)
Frame = -2
Query: 201 EFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNKSFNDGDASADYQTKSKKV 22
E E K E S + K + S SE + + E + + S++ + D ++A+ + ++V
Sbjct: 372 EAEPKSNEQSA-KAKEKLSESSSEVVENQQTTEDTTEVSADSASMDDRSNAEQPKEKEEV 430
Query: 21 EKNSARD 1
EK A+D
Sbjct: 431 EKEKAKD 437
>At2g35210.1 68415.m04319 human Rev interacting-like family protein
/ hRIP family protein similar to ARFGAP1 protein
GI:7211442 from [Homo sapiens]; contains InterPro
accession IPR001164: Human Rev interacting-like protein
(hRIP)
Length = 395
Score = 27.1 bits (57), Expect = 9.4
Identities = 18/55 (32%), Positives = 28/55 (50%)
Frame = -2
Query: 222 ESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNKSFNDGD 58
E+++ ++F N ++ SS N + ++ E KSS K S SS F DGD
Sbjct: 294 ETDEARKKFTNAKSISSAQYFGNDNNSADLEAKSSLKKFSGSSAISSADLFGDGD 348
>At1g80930.1 68414.m09495 MIF4G domain-containing protein / MA3
domain-containing protein similar to SP|Q9P6R9 Cell
cycle control protein cwf22 {Schizosaccharomyces pombe};
contains Pfam profiles PF02854: MIF4G domain, PF02847:
MA3 domain
Length = 900
Score = 27.1 bits (57), Expect = 9.4
Identities = 20/83 (24%), Positives = 34/83 (40%), Gaps = 5/83 (6%)
Frame = -2
Query: 234 REKSESNKKSREFENKEAESSTYRDKNRSVNSGSE----RKSSGKDEEYSEQNSSNKSFN 67
+++ E+N S + K E + D R VN G R + DEE + + +
Sbjct: 91 KDRKEANSGSEDDRGKRIEVDSDGDGERRVNKGRNTDRVRADTSSDEEDDLKGNKKEPME 150
Query: 66 -DGDASADYQTKSKKVEKNSARD 1
D D + +S KV + R+
Sbjct: 151 VDDDYGRRGRRRSPKVMEKQGRE 173
>At1g66050.1 68414.m07497 zinc finger (C3HC4-type RING finger)
family protein contains zinc finger, C3HC4 type (RING
finger), signature, PROSITE:PS00518
Length = 623
Score = 27.1 bits (57), Expect = 9.4
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = -2
Query: 111 DEEYSEQNSSNKSFNDGDASADYQTKSKKVEKNS 10
+EE SSN S +G+ ++ TK K++KNS
Sbjct: 582 EEEAEVAESSNISEEEGEEESEPPTKKIKMDKNS 615
>At1g63420.1 68414.m07172 expressed protein
Length = 578
Score = 27.1 bits (57), Expect = 9.4
Identities = 16/46 (34%), Positives = 24/46 (52%)
Frame = -2
Query: 219 SNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSS 82
S KKS E + S++ ++NRS S S SG ++ +E N S
Sbjct: 125 SEKKSPEETGSSVDCSSFLNQNRS-GSCSRTLQSGYNQNQTESNRS 169
>At1g26680.1 68414.m03250 transcriptional factor B3 family protein
low similarity to reproductive meristem gene 1 from
[Brassica oleracea var. botrytis] GI:3170424,
[Arabidopsis thaliana] GI:13604227; contains Pfam
profile PF02362: B3 DNA binding domain
Length = 920
Score = 27.1 bits (57), Expect = 9.4
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Frame = -2
Query: 147 VNSGSERKSSGKDEEYSEQNSSNKSFNDGDASAD-YQTKSKKVEKNSA 7
VNS S SSG D SE+ S ++ D + S D +TK +K +S+
Sbjct: 841 VNSLSSNPSSGDDSSRSEE-SEEENMEDKNISQDCLETKKRKYCSSSS 887
>At1g22882.1 68414.m02857 expressed protein
Length = 660
Score = 27.1 bits (57), Expect = 9.4
Identities = 12/53 (22%), Positives = 26/53 (49%)
Frame = -2
Query: 231 EKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNKS 73
+KSE N + + + + + +++ +G+ + D E+ EQN NK+
Sbjct: 154 KKSEINNTGTWNDTEGKDDNNFLKQSQLNKTGTGNDTESSDNEFLEQNQMNKT 206
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,732,028
Number of Sequences: 28952
Number of extensions: 141345
Number of successful extensions: 1247
Number of sequences better than 10.0: 120
Number of HSP's better than 10.0 without gapping: 1029
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1230
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1180950720
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -