Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0309.Seq
         (548 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY193729-1|AAO62002.1|  499|Anopheles gambiae cytochrome P450 CY...    25   2.2  
AY062208-1|AAL58569.1|  503|Anopheles gambiae cytochrome P450 CY...    23   6.6  
AJ618929-1|CAF02008.1|  144|Anopheles gambiae odorant-binding pr...    23   6.6  
EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    23   8.8  

>AY193729-1|AAO62002.1|  499|Anopheles gambiae cytochrome P450
           CYPm3r9 protein.
          Length = 499

 Score = 24.6 bits (51), Expect = 2.2
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = +2

Query: 308 VKEKHRECKHNLLPRHN 358
           V+EK REC   +L +HN
Sbjct: 326 VQEKGRECVREILQKHN 342


>AY062208-1|AAL58569.1|  503|Anopheles gambiae cytochrome P450
           CYP6M1 protein.
          Length = 503

 Score = 23.0 bits (47), Expect = 6.6
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +2

Query: 308 VKEKHRECKHNLLPRHN 358
           V+EK R+C   +L +HN
Sbjct: 325 VQEKGRQCVQEVLAKHN 341


>AJ618929-1|CAF02008.1|  144|Anopheles gambiae odorant-binding
           protein OBPjj83b protein.
          Length = 144

 Score = 23.0 bits (47), Expect = 6.6
 Identities = 14/50 (28%), Positives = 26/50 (52%)
 Frame = +1

Query: 10  NVVLLSDGI*SKTLIDLEKKKLYDIN*LSLEKANNSSHWLQNEELKLHLR 159
           N +LL  G+    +++++     D N   +E  +N+     N+ELK+H R
Sbjct: 2   NSLLLIGGV--LVVLNVQFVTAADNNESVIESCSNAVQGAANDELKVHYR 49


>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
            channel alpha1 subunit protein.
          Length = 1893

 Score = 22.6 bits (46), Expect = 8.8
 Identities = 13/38 (34%), Positives = 21/38 (55%)
 Frame = +2

Query: 206  LCDSVTAPRACSAEGLGR*G*LFTAINIPELPFVVKEK 319
            L DS    RA +   +G    L++ INI +LP + K++
Sbjct: 1752 LDDSSILKRANANANIGSHSKLYSQINIIKLPILRKDR 1789


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 508,590
Number of Sequences: 2352
Number of extensions: 9599
Number of successful extensions: 16
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 50881347
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)