BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= msgV0308.Seq (598 letters) Database: human 237,096 sequences; 76,859,062 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value BC029067-1|AAH29067.1| 65|Homo sapiens chromosome 13 open read... 100 4e-21 AL138960-2|CAI12995.1| 65|Homo sapiens RP11-269C23.1 protein. 100 4e-21 CR533472-1|CAG38503.1| 66|Homo sapiens SERP1 protein. 90 6e-18 BC112365-1|AAI12366.1| 66|Homo sapiens stress-associated endop... 90 6e-18 BC112364-1|AAI12365.1| 66|Homo sapiens stress-associated endop... 90 6e-18 BC108314-1|AAI08315.1| 66|Homo sapiens stress-associated endop... 90 6e-18 AF136975-1|AAG49436.1| 66|Homo sapiens ribosome attached membr... 90 6e-18 AB022427-1|BAA81895.1| 66|Homo sapiens SERP1 protein. 90 6e-18 BC029488-1|AAH29488.1| 294|Homo sapiens sperm acrosome associat... 33 0.77 AL136096-1|CAI19915.1| 294|Homo sapiens sperm acrosome associat... 33 0.77 AF203447-1|AAG31422.1| 294|Homo sapiens sperm acrosome membrane... 33 0.77 BC128392-1|AAI28393.1| 782|Homo sapiens zinc finger protein 786... 29 9.5 BC109245-1|AAI09246.1| 753|Homo sapiens ZNF786 protein protein. 29 9.5 >BC029067-1|AAH29067.1| 65|Homo sapiens chromosome 13 open reading frame 21 protein. Length = 65 Score = 100 bits (239), Expect = 4e-21 Identities = 45/63 (71%), Positives = 54/63 (85%) Frame = +1 Query: 67 MAPKQRMRIANEIASKNITMRGNVPKTTKEKEDQYPVAPWLLALFIFVVCGSAVFQIIQS 246 M KQR+R+ANE SKNIT RGNV KT + +E++YPV PWLLALF+FVVCGSA+FQIIQS Sbjct: 1 MVAKQRIRMANEKHSKNITQRGNVAKTLRPQEEKYPVGPWLLALFVFVVCGSAIFQIIQS 60 Query: 247 IRL 255 IR+ Sbjct: 61 IRM 63 >AL138960-2|CAI12995.1| 65|Homo sapiens RP11-269C23.1 protein. Length = 65 Score = 100 bits (239), Expect = 4e-21 Identities = 45/63 (71%), Positives = 54/63 (85%) Frame = +1 Query: 67 MAPKQRMRIANEIASKNITMRGNVPKTTKEKEDQYPVAPWLLALFIFVVCGSAVFQIIQS 246 M KQR+R+ANE SKNIT RGNV KT + +E++YPV PWLLALF+FVVCGSA+FQIIQS Sbjct: 1 MVAKQRIRMANEKHSKNITQRGNVAKTLRPQEEKYPVGPWLLALFVFVVCGSAIFQIIQS 60 Query: 247 IRL 255 IR+ Sbjct: 61 IRM 63 >CR533472-1|CAG38503.1| 66|Homo sapiens SERP1 protein. Length = 66 Score = 89.8 bits (213), Expect = 6e-18 Identities = 44/64 (68%), Positives = 52/64 (81%), Gaps = 1/64 (1%) Frame = +1 Query: 67 MAPKQRMRIANEIASKNITMRGNVPKTTKEK-EDQYPVAPWLLALFIFVVCGSAVFQIIQ 243 M KQR+R+ANE SKNIT RGNV KT++ E++ V PWLLALFIFVVCGSA+FQIIQ Sbjct: 1 MVAKQRIRMANEKHSKNITQRGNVAKTSRNAPEEKASVGPWLLALFIFVVCGSAIFQIIQ 60 Query: 244 SIRL 255 SIR+ Sbjct: 61 SIRM 64 >BC112365-1|AAI12366.1| 66|Homo sapiens stress-associated endoplasmic reticulum protein 1 protein. Length = 66 Score = 89.8 bits (213), Expect = 6e-18 Identities = 44/64 (68%), Positives = 52/64 (81%), Gaps = 1/64 (1%) Frame = +1 Query: 67 MAPKQRMRIANEIASKNITMRGNVPKTTKEK-EDQYPVAPWLLALFIFVVCGSAVFQIIQ 243 M KQR+R+ANE SKNIT RGNV KT++ E++ V PWLLALFIFVVCGSA+FQIIQ Sbjct: 1 MVAKQRIRMANEKHSKNITQRGNVAKTSRNAPEEKASVGPWLLALFIFVVCGSAIFQIIQ 60 Query: 244 SIRL 255 SIR+ Sbjct: 61 SIRM 64 >BC112364-1|AAI12365.1| 66|Homo sapiens stress-associated endoplasmic reticulum protein 1 protein. Length = 66 Score = 89.8 bits (213), Expect = 6e-18 Identities = 44/64 (68%), Positives = 52/64 (81%), Gaps = 1/64 (1%) Frame = +1 Query: 67 MAPKQRMRIANEIASKNITMRGNVPKTTKEK-EDQYPVAPWLLALFIFVVCGSAVFQIIQ 243 M KQR+R+ANE SKNIT RGNV KT++ E++ V PWLLALFIFVVCGSA+FQIIQ Sbjct: 1 MVAKQRIRMANEKHSKNITQRGNVAKTSRNAPEEKASVGPWLLALFIFVVCGSAIFQIIQ 60 Query: 244 SIRL 255 SIR+ Sbjct: 61 SIRM 64 >BC108314-1|AAI08315.1| 66|Homo sapiens stress-associated endoplasmic reticulum protein 1 protein. Length = 66 Score = 89.8 bits (213), Expect = 6e-18 Identities = 44/64 (68%), Positives = 52/64 (81%), Gaps = 1/64 (1%) Frame = +1 Query: 67 MAPKQRMRIANEIASKNITMRGNVPKTTKEK-EDQYPVAPWLLALFIFVVCGSAVFQIIQ 243 M KQR+R+ANE SKNIT RGNV KT++ E++ V PWLLALFIFVVCGSA+FQIIQ Sbjct: 1 MVAKQRIRMANEKHSKNITQRGNVAKTSRNAPEEKASVGPWLLALFIFVVCGSAIFQIIQ 60 Query: 244 SIRL 255 SIR+ Sbjct: 61 SIRM 64 >AF136975-1|AAG49436.1| 66|Homo sapiens ribosome attached membrane protein 4 protein. Length = 66 Score = 89.8 bits (213), Expect = 6e-18 Identities = 44/64 (68%), Positives = 52/64 (81%), Gaps = 1/64 (1%) Frame = +1 Query: 67 MAPKQRMRIANEIASKNITMRGNVPKTTKEK-EDQYPVAPWLLALFIFVVCGSAVFQIIQ 243 M KQR+R+ANE SKNIT RGNV KT++ E++ V PWLLALFIFVVCGSA+FQIIQ Sbjct: 1 MVAKQRIRMANEKHSKNITQRGNVAKTSRNAPEEKASVGPWLLALFIFVVCGSAIFQIIQ 60 Query: 244 SIRL 255 SIR+ Sbjct: 61 SIRM 64 >AB022427-1|BAA81895.1| 66|Homo sapiens SERP1 protein. Length = 66 Score = 89.8 bits (213), Expect = 6e-18 Identities = 44/64 (68%), Positives = 52/64 (81%), Gaps = 1/64 (1%) Frame = +1 Query: 67 MAPKQRMRIANEIASKNITMRGNVPKTTKEK-EDQYPVAPWLLALFIFVVCGSAVFQIIQ 243 M KQR+R+ANE SKNIT RGNV KT++ E++ V PWLLALFIFVVCGSA+FQIIQ Sbjct: 1 MVAKQRIRMANEKHSKNITQRGNVAKTSRNAPEEKASVGPWLLALFIFVVCGSAIFQIIQ 60 Query: 244 SIRL 255 SIR+ Sbjct: 61 SIRM 64 >BC029488-1|AAH29488.1| 294|Homo sapiens sperm acrosome associated 1 protein. Length = 294 Score = 33.1 bits (72), Expect = 0.77 Identities = 15/42 (35%), Positives = 21/42 (50%) Frame = +3 Query: 126 EGECTQNYQGKRRPISCGTLAPCSLHLRSVWLCCVPDNPINK 251 E +C + R P CG P S L SV L C+ +P+N+ Sbjct: 105 ESKCVVRVEECRGPTDCGWGKPISESLESVRLACIHTSPLNR 146 >AL136096-1|CAI19915.1| 294|Homo sapiens sperm acrosome associated 1 protein. Length = 294 Score = 33.1 bits (72), Expect = 0.77 Identities = 15/42 (35%), Positives = 21/42 (50%) Frame = +3 Query: 126 EGECTQNYQGKRRPISCGTLAPCSLHLRSVWLCCVPDNPINK 251 E +C + R P CG P S L SV L C+ +P+N+ Sbjct: 105 ESKCVVRVEECRGPTDCGWGKPISESLESVRLACIHTSPLNR 146 >AF203447-1|AAG31422.1| 294|Homo sapiens sperm acrosome membrane protein SAMP32 protein. Length = 294 Score = 33.1 bits (72), Expect = 0.77 Identities = 15/42 (35%), Positives = 21/42 (50%) Frame = +3 Query: 126 EGECTQNYQGKRRPISCGTLAPCSLHLRSVWLCCVPDNPINK 251 E +C + R P CG P S L SV L C+ +P+N+ Sbjct: 105 ESKCVVRVEECRGPTDCGWGKPISESLESVRLACIHTSPLNR 146 >BC128392-1|AAI28393.1| 782|Homo sapiens zinc finger protein 786 protein. Length = 782 Score = 29.5 bits (63), Expect = 9.5 Identities = 13/41 (31%), Positives = 23/41 (56%), Gaps = 1/41 (2%) Frame = +3 Query: 84 NAYRQRDRQ*KHHN-EGECTQNYQGKRRPISCGTLAPCSLH 203 N++++ D + H EG C+ + G+R P+S +PC H Sbjct: 351 NSHQEGDTEALQHGAEGPCSCSECGERSPMSARLASPCRAH 391 >BC109245-1|AAI09246.1| 753|Homo sapiens ZNF786 protein protein. Length = 753 Score = 29.5 bits (63), Expect = 9.5 Identities = 13/41 (31%), Positives = 23/41 (56%), Gaps = 1/41 (2%) Frame = +3 Query: 84 NAYRQRDRQ*KHHN-EGECTQNYQGKRRPISCGTLAPCSLH 203 N++++ D + H EG C+ + G+R P+S +PC H Sbjct: 322 NSHQEGDTEALQHGAEGPCSCSECGERSPMSARLASPCRAH 362 Database: human Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 76,859,062 Number of sequences in database: 237,096 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 83,463,929 Number of Sequences: 237096 Number of extensions: 1670710 Number of successful extensions: 3536 Number of sequences better than 10.0: 13 Number of HSP's better than 10.0 without gapping: 3387 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3530 length of database: 76,859,062 effective HSP length: 86 effective length of database: 56,468,806 effective search space used: 6324506272 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -