Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0308.Seq
(598 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY071239-1|AAL48861.1| 64|Drosophila melanogaster RE27904p pro... 110 1e-24
AE014296-593|AAN11541.1| 64|Drosophila melanogaster CG32276-PB... 110 1e-24
AE014296-592|AAN11540.1| 64|Drosophila melanogaster CG32276-PA... 110 1e-24
BT001439-1|AAN71194.1| 1040|Drosophila melanogaster GH25102p pro... 31 0.90
AY060725-1|AAL28273.1| 515|Drosophila melanogaster GH17414p pro... 31 0.90
AE013599-3262|AAF46757.2| 1040|Drosophila melanogaster CG17922-P... 31 0.90
BT025107-1|ABE73278.1| 501|Drosophila melanogaster IP10618p pro... 29 3.6
AL035632-1|CAB38469.1| 410|Drosophila melanogaster EG:BACN32G11... 29 6.3
AE014298-206|AAF45624.2| 414|Drosophila melanogaster CG18531-PA... 29 6.3
>AY071239-1|AAL48861.1| 64|Drosophila melanogaster RE27904p
protein.
Length = 64
Score = 110 bits (265), Expect = 1e-24
Identities = 50/62 (80%), Positives = 56/62 (90%)
Frame = +1
Query: 67 MAPKQRMRIANEIASKNITMRGNVPKTTKEKEDQYPVAPWLLALFIFVVCGSAVFQIIQS 246
MAP QRMR+ANE ASK +TMRGNVPK++K KE QYPV PWLLALFIFVVCGSA+FQI+QS
Sbjct: 1 MAPPQRMRVANEKASKYVTMRGNVPKSSKTKEGQYPVGPWLLALFIFVVCGSAIFQIVQS 60
Query: 247 IR 252
IR
Sbjct: 61 IR 62
>AE014296-593|AAN11541.1| 64|Drosophila melanogaster CG32276-PB,
isoform B protein.
Length = 64
Score = 110 bits (265), Expect = 1e-24
Identities = 50/62 (80%), Positives = 56/62 (90%)
Frame = +1
Query: 67 MAPKQRMRIANEIASKNITMRGNVPKTTKEKEDQYPVAPWLLALFIFVVCGSAVFQIIQS 246
MAP QRMR+ANE ASK +TMRGNVPK++K KE QYPV PWLLALFIFVVCGSA+FQI+QS
Sbjct: 1 MAPPQRMRVANEKASKYVTMRGNVPKSSKTKEGQYPVGPWLLALFIFVVCGSAIFQIVQS 60
Query: 247 IR 252
IR
Sbjct: 61 IR 62
>AE014296-592|AAN11540.1| 64|Drosophila melanogaster CG32276-PA,
isoform A protein.
Length = 64
Score = 110 bits (265), Expect = 1e-24
Identities = 50/62 (80%), Positives = 56/62 (90%)
Frame = +1
Query: 67 MAPKQRMRIANEIASKNITMRGNVPKTTKEKEDQYPVAPWLLALFIFVVCGSAVFQIIQS 246
MAP QRMR+ANE ASK +TMRGNVPK++K KE QYPV PWLLALFIFVVCGSA+FQI+QS
Sbjct: 1 MAPPQRMRVANEKASKYVTMRGNVPKSSKTKEGQYPVGPWLLALFIFVVCGSAIFQIVQS 60
Query: 247 IR 252
IR
Sbjct: 61 IR 62
>BT001439-1|AAN71194.1| 1040|Drosophila melanogaster GH25102p
protein.
Length = 1040
Score = 31.5 bits (68), Expect = 0.90
Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Frame = +1
Query: 106 ASKNITMRGNVPKTTKEKEDQYPVAPWLLALFIFVVCGSAVFQIIQSIRLLKSR-RQLEN 282
A+K T G PK ++ E + WL+ +F+F + + II + K RQLE+
Sbjct: 652 ATKTATSIGKNPKPERQGEYVFMTVAWLMGVFVFALLIGQIRDIISTATRNKHEYRQLED 711
>AY060725-1|AAL28273.1| 515|Drosophila melanogaster GH17414p
protein.
Length = 515
Score = 31.5 bits (68), Expect = 0.90
Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Frame = +1
Query: 106 ASKNITMRGNVPKTTKEKEDQYPVAPWLLALFIFVVCGSAVFQIIQSIRLLKSR-RQLEN 282
A+K T G PK ++ E + WL+ +F+F + + II + K RQLE+
Sbjct: 127 ATKTATSIGKNPKPERQGEYVFMTVAWLMGVFVFALLIGQIRDIISTATRNKHEYRQLED 186
>AE013599-3262|AAF46757.2| 1040|Drosophila melanogaster CG17922-PA
protein.
Length = 1040
Score = 31.5 bits (68), Expect = 0.90
Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Frame = +1
Query: 106 ASKNITMRGNVPKTTKEKEDQYPVAPWLLALFIFVVCGSAVFQIIQSIRLLKSR-RQLEN 282
A+K T G PK ++ E + WL+ +F+F + + II + K RQLE+
Sbjct: 652 ATKTATSIGKNPKPERQGEYVFMTVAWLMGVFVFALLIGQIRDIISTATRNKHEYRQLED 711
>BT025107-1|ABE73278.1| 501|Drosophila melanogaster IP10618p
protein.
Length = 501
Score = 29.5 bits (63), Expect = 3.6
Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 8/51 (15%)
Frame = +1
Query: 169 YPVAPWLLALFIFVVC------GSAVFQII--QSIRLLKSRRQLENCYRKH 297
Y + W+L LF+F VC V ++I SIR L R++EN Y +H
Sbjct: 5 YILLNWIL-LFLFTVCKAKKAENDVVQEVIYSNSIRALSELREIENSYMEH 54
>AL035632-1|CAB38469.1| 410|Drosophila melanogaster EG:BACN32G11.1
protein.
Length = 410
Score = 28.7 bits (61), Expect = 6.3
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = +1
Query: 163 DQYPVAPWLLALFIFVVCGSAVFQIIQSIRLLKSR 267
D++P+ W+ L +VCG FQI + +L++ R
Sbjct: 170 DRFPIY-WISYLLPLLVCGLRYFQIFNATQLVRQR 203
>AE014298-206|AAF45624.2| 414|Drosophila melanogaster CG18531-PA
protein.
Length = 414
Score = 28.7 bits (61), Expect = 6.3
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = +1
Query: 163 DQYPVAPWLLALFIFVVCGSAVFQIIQSIRLLKSR 267
D++P+ W+ L +VCG FQI + +L++ R
Sbjct: 174 DRFPIY-WISYLLPLLVCGLRYFQIFNATQLVRQR 207
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,557,452
Number of Sequences: 53049
Number of extensions: 519551
Number of successful extensions: 1337
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1297
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1337
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2420893683
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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