Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0306.Seq
         (598 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic hor...    23   2.0  
DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic hor...    23   2.0  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    23   2.6  
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    22   4.5  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      22   4.5  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      22   4.5  
AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    21   6.0  

>EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = +2

Query: 26  LFPNYNHEIYIFFFLFVISYSI 91
           +FP Y HE+    F  V+ Y++
Sbjct: 209 VFPTYAHELTYLLFGMVMMYAL 230


>DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = +2

Query: 26  LFPNYNHEIYIFFFLFVISYSI 91
           +FP Y HE+    F  V+ Y++
Sbjct: 209 VFPTYAHELTYLLFGMVMMYAL 230


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = +3

Query: 174 MVLGLGVYHRSISFLVA 224
           +VLGLGVY RS +   A
Sbjct: 260 LVLGLGVYGRSFTLASA 276


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 9/14 (64%), Positives = 11/14 (78%)
 Frame = +3

Query: 543 LDL*SFIXSFKDQY 584
           +DL SFI SF D+Y
Sbjct: 140 IDLPSFIESFPDKY 153


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = -1

Query: 463 TNIEKNLLKHREQWKE 416
           TN+EK+ L H EQ ++
Sbjct: 318 TNLEKSNLNHNEQLRK 333


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = -1

Query: 463 TNIEKNLLKHREQWKE 416
           TN+EK+ L H EQ ++
Sbjct: 210 TNLEKSNLNHNEQLRK 225


>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 21.4 bits (43), Expect = 6.0
 Identities = 7/16 (43%), Positives = 13/16 (81%)
 Frame = -1

Query: 88  TIRNNKQKKKNVNFMV 41
           T+RNN+Q ++ V F++
Sbjct: 126 TVRNNRQIRRMVVFLI 141


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 147,365
Number of Sequences: 336
Number of extensions: 3368
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15039504
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)