Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0306.Seq
         (598 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    24   3.2  
DQ383732-1|ABD47743.1|  201|Anopheles gambiae IAP-antagonist mic...    24   4.3  
DQ314781-1|ABC54566.1|  407|Anopheles gambiae OSKAR protein.           23   9.9  
AY344832-1|AAR05803.1|  333|Anopheles gambiae ICHIT protein.           23   9.9  
AY344831-1|AAR05802.1|  333|Anopheles gambiae ICHIT protein.           23   9.9  

>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 24.2 bits (50), Expect = 3.2
 Identities = 17/52 (32%), Positives = 23/52 (44%), Gaps = 6/52 (11%)
 Frame = -3

Query: 245 EGTPEDRGDQKRDGAMIYA*P------*DHTGPELLRTEPNGESWRRPMPRG 108
           EG P D+GD+   G++    P          GPE LR EP    +  P  +G
Sbjct: 458 EGMPGDKGDKGESGSVGMPGPQGPRGYPGQPGPEGLRGEPGQPGYGIPGQKG 509


>DQ383732-1|ABD47743.1|  201|Anopheles gambiae IAP-antagonist
           michelob_x protein.
          Length = 201

 Score = 23.8 bits (49), Expect = 4.3
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = +3

Query: 309 PTPFKIFYTSYYIRYFC 359
           P P +I+  +YY  Y+C
Sbjct: 153 PKPPRIYNNNYYYNYYC 169


>DQ314781-1|ABC54566.1|  407|Anopheles gambiae OSKAR protein.
          Length = 407

 Score = 22.6 bits (46), Expect = 9.9
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -3

Query: 155 RTEPNGESWRRPMPRGT 105
           R  P G ++RR MPR T
Sbjct: 103 RGGPGGSNYRRYMPRAT 119


>AY344832-1|AAR05803.1|  333|Anopheles gambiae ICHIT protein.
          Length = 333

 Score = 22.6 bits (46), Expect = 9.9
 Identities = 9/30 (30%), Positives = 13/30 (43%)
 Frame = -2

Query: 255 RYPRGDTRRQGRPKTRWSDDIRLTLGPYWT 166
           R+P   T       ++W+D    T  P WT
Sbjct: 130 RFPTTTTTSAPTTPSQWTDPTITTTTPVWT 159


>AY344831-1|AAR05802.1|  333|Anopheles gambiae ICHIT protein.
          Length = 333

 Score = 22.6 bits (46), Expect = 9.9
 Identities = 9/30 (30%), Positives = 13/30 (43%)
 Frame = -2

Query: 255 RYPRGDTRRQGRPKTRWSDDIRLTLGPYWT 166
           R+P   T       ++W+D    T  P WT
Sbjct: 130 RFPTTTTTSAPTTPSQWTDPTITTTTPVWT 159


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 634,949
Number of Sequences: 2352
Number of extensions: 13964
Number of successful extensions: 28
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 57609459
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)