Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0306.Seq
         (598 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT003497-1|AAO39501.1|  254|Drosophila melanogaster RE46560p pro...    31   1.6  
AE014297-4555|AAF57017.2|  254|Drosophila melanogaster CG1983-PA...    31   1.6  
BT029283-1|ABK30920.1|  361|Drosophila melanogaster IP16005p pro...    30   2.7  

>BT003497-1|AAO39501.1|  254|Drosophila melanogaster RE46560p
           protein.
          Length = 254

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 11/33 (33%), Positives = 20/33 (60%)
 Frame = -3

Query: 374 EIRRKTKVTDIITRIENLKWSWTGHMLRCKTNK 276
           E+  K++  DI+ +  +++W + GHM   K NK
Sbjct: 70  ELEEKSRHPDILAKCPDIRWHFIGHMQSNKINK 102


>AE014297-4555|AAF57017.2|  254|Drosophila melanogaster CG1983-PA
           protein.
          Length = 254

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 11/33 (33%), Positives = 20/33 (60%)
 Frame = -3

Query: 374 EIRRKTKVTDIITRIENLKWSWTGHMLRCKTNK 276
           E+  K++  DI+ +  +++W + GHM   K NK
Sbjct: 70  ELEEKSRHPDILAKCPDIRWHFIGHMQSNKINK 102


>BT029283-1|ABK30920.1|  361|Drosophila melanogaster IP16005p
           protein.
          Length = 361

 Score = 29.9 bits (64), Expect = 2.7
 Identities = 16/40 (40%), Positives = 19/40 (47%)
 Frame = +3

Query: 309 PTPFKIFYTSYYIRYFCLPSYFPISNSVTKSDTQHASFHC 428
           PT F I+   Y I YF   S    S   T+ +T H S HC
Sbjct: 321 PTQFIIYIYIYSILYFWNDSPNSFSVFTTQPNTPHLSIHC 360


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,827,289
Number of Sequences: 53049
Number of extensions: 584246
Number of successful extensions: 1415
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1368
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1415
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2420893683
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)