BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0305.Seq
(499 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P07856 Cluster: Sericin 1 precursor; n=4; Bombyx mori|R... 42 0.010
UniRef50_UPI00001D0B82 Cluster: PREDICTED: hypothetical protein;... 40 0.031
UniRef50_Q4T3U5 Cluster: Chromosome undetermined SCAF9919, whole... 38 0.17
UniRef50_A7S7N0 Cluster: Predicted protein; n=3; Nematostella ve... 36 0.67
UniRef50_Q02910 Cluster: Calphotin; n=2; Drosophila melanogaster... 35 1.2
UniRef50_UPI0000D9E378 Cluster: PREDICTED: hypothetical protein;... 34 1.5
UniRef50_Q3MKM9 Cluster: Slit-like 2 protein; n=3; Danio rerio|R... 34 1.5
UniRef50_A7SB40 Cluster: Predicted protein; n=3; Fungi/Metazoa g... 34 1.5
UniRef50_UPI0000D56375 Cluster: PREDICTED: hypothetical protein;... 34 2.0
UniRef50_A4JWH2 Cluster: Putative uncharacterized protein; n=1; ... 33 2.7
UniRef50_Q9VMV9 Cluster: CG33113-PF, isoform F; n=11; Endopteryg... 33 2.7
UniRef50_Q69NX2 Cluster: Putative fanconi anemia, complementatio... 33 3.6
UniRef50_Q0D8J4 Cluster: Os07g0154400 protein; n=3; Oryza sativa... 33 3.6
UniRef50_A7ME55 Cluster: Putative uncharacterized protein; n=1; ... 32 6.2
UniRef50_UPI0000E47703 Cluster: PREDICTED: similar to ankyrin 2,... 32 8.2
UniRef50_Q8DKQ0 Cluster: Tlr0809 protein; n=5; Cyanobacteria|Rep... 32 8.2
UniRef50_A1AMH9 Cluster: Radical SAM domain protein; n=1; Peloba... 32 8.2
>UniRef50_P07856 Cluster: Sericin 1 precursor; n=4; Bombyx mori|Rep:
Sericin 1 precursor - Bombyx mori (Silk moth)
Length = 1186
Score = 41.5 bits (93), Expect = 0.010
Identities = 18/21 (85%), Positives = 19/21 (90%)
Frame = +2
Query: 302 ASTYGYSSRHXGGRVXSTGSS 364
+STYGYSSRH GGRV STGSS
Sbjct: 692 SSTYGYSSRHRGGRVSSTGSS 712
Score = 36.7 bits (81), Expect = 0.29
Identities = 16/21 (76%), Positives = 17/21 (80%)
Frame = +2
Query: 302 ASTYGYSSRHXGGRVXSTGSS 364
+STYGYSS H GG V STGSS
Sbjct: 616 SSTYGYSSSHRGGSVSSTGSS 636
Score = 36.7 bits (81), Expect = 0.29
Identities = 16/21 (76%), Positives = 17/21 (80%)
Frame = +2
Query: 302 ASTYGYSSRHXGGRVXSTGSS 364
+STYGYSS H GG V STGSS
Sbjct: 654 SSTYGYSSSHRGGSVSSTGSS 674
>UniRef50_UPI00001D0B82 Cluster: PREDICTED: hypothetical protein;
n=1; Rattus norvegicus|Rep: PREDICTED: hypothetical
protein - Rattus norvegicus
Length = 221
Score = 39.9 bits (89), Expect = 0.031
Identities = 27/83 (32%), Positives = 42/83 (50%), Gaps = 2/83 (2%)
Frame = +3
Query: 9 PLAVPVTPIQAQKVQDPVHPAVAALMDIAPAIVVEAYHPPAVPATLIQAQRMQDP--VHL 182
P+AVP+T + A + P+ +A M + A+++ P AVP ++ A M P V +
Sbjct: 8 PIAVPMTVLMAVPIAVPIAAPIAVPMAVPIAVLMAV--PIAVPMAVLMAVPMAVPMAVPI 65
Query: 183 AVAALMDIALAIVVEVYHPPAVP 251
AV + IA I + P AVP
Sbjct: 66 AVPMAVPIAAPIAAPIAVPMAVP 88
Score = 35.1 bits (77), Expect = 0.88
Identities = 29/89 (32%), Positives = 42/89 (47%), Gaps = 8/89 (8%)
Frame = +3
Query: 9 PLAVPVTPIQAQKVQDPVHPAVAALM------DIAPAIVVEAYHPPAVPATLIQAQRMQD 170
P+AVP+T A + P+ +A M IA I V P AVP T+ A M
Sbjct: 88 PIAVPMTVPMAVPMAVPIAVPIAVPMTVLMAVPIAVPIAVPMAVPIAVPMTVPMAVPMAV 147
Query: 171 PVHLAVAALMDIALAI--VVEVYHPPAVP 251
P+ + + LM + +A+ V + P AVP
Sbjct: 148 PIAVPMTVLMAVPIAVPMAVSMAMPIAVP 176
Score = 33.1 bits (72), Expect = 3.6
Identities = 23/81 (28%), Positives = 40/81 (49%)
Frame = +3
Query: 9 PLAVPVTPIQAQKVQDPVHPAVAALMDIAPAIVVEAYHPPAVPATLIQAQRMQDPVHLAV 188
P+AVP+ + A + P+ +A M + A+ + P AVP A + P+ + +
Sbjct: 32 PMAVPIAVLMAVPIAVPMAVLMAVPMAVPMAVPIAV--PMAVPIAAPIAAPIAVPMAVPI 89
Query: 189 AALMDIALAIVVEVYHPPAVP 251
A M + +A+ + V P AVP
Sbjct: 90 AVPMTVPMAVPMAV--PIAVP 108
>UniRef50_Q4T3U5 Cluster: Chromosome undetermined SCAF9919, whole
genome shotgun sequence; n=1; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF9919,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 930
Score = 37.5 bits (83), Expect = 0.17
Identities = 35/117 (29%), Positives = 42/117 (35%), Gaps = 1/117 (0%)
Frame = +3
Query: 15 AVPVTPIQAQKV-QDPVHPAVAALMDIAPAIVVEAYHPPAVPATLIQAQRMQDPVHLAVA 191
AVP T Q V Q PA + PA+ Y P AVP T Q Q H AV
Sbjct: 540 AVPQTNYQPAAVPQTNYQPAAVPQTNYQPAVPQTNYQPAAVPQTNYQPAVPQTNYHPAVP 599
Query: 192 ALMDIALAIVVEVYHPPAVPAH*FKHKECXIQYIRR*QALTDIAPGIXVDAYXPPAV 362
A+ Y P AVP ++ Y T+ P + Y P AV
Sbjct: 600 KTNYQPSAVPQTNYQPSAVPQTNYQPAVPQTNYQPSAVPQTNYHPAVPKTNYQPSAV 656
Score = 35.5 bits (78), Expect = 0.67
Identities = 26/83 (31%), Positives = 32/83 (38%)
Frame = +3
Query: 3 FRPLAVPVTPIQAQKVQDPVHPAVAALMDIAPAIVVEAYHPPAVPATLIQAQRMQDPVHL 182
++P AVP T Q Q HPAV A+ Y P AVP T Q Q
Sbjct: 575 YQPAAVPQTNYQPAVPQTNYHPAVPKTNYQPSAVPQTNYQPSAVPQTNYQPAVPQTNYQP 634
Query: 183 AVAALMDIALAIVVEVYHPPAVP 251
+ + A+ Y P AVP
Sbjct: 635 SAVPQTNYHPAVPKTNYQPSAVP 657
Score = 35.1 bits (77), Expect = 0.88
Identities = 31/116 (26%), Positives = 42/116 (36%)
Frame = +3
Query: 15 AVPVTPIQAQKVQDPVHPAVAALMDIAPAIVVEAYHPPAVPATLIQAQRMQDPVHLAVAA 194
AVP T Q Q PA + PA V + + PAVP T Q Q A
Sbjct: 493 AVPQTNYQPAVPQTNYQPAAVPQTNYQPAAVPQTNYQPAVPQTNYQPAVPQTNYQPAAVP 552
Query: 195 LMDIALAIVVEVYHPPAVPAH*FKHKECXIQYIRR*QALTDIAPGIXVDAYXPPAV 362
+ A V + + PAVP ++ + T+ P + Y P AV
Sbjct: 553 QTNYQPAAVPQTNYQPAVPQTNYQPAAVPQTNYQPAVPQTNYHPAVPKTNYQPSAV 608
Score = 33.9 bits (74), Expect = 2.0
Identities = 23/83 (27%), Positives = 33/83 (39%)
Frame = +3
Query: 3 FRPLAVPVTPIQAQKVQDPVHPAVAALMDIAPAIVVEAYHPPAVPATLIQAQRMQDPVHL 182
++P AVP T Q Q P+ + PA+ Y P AVP T Q Q
Sbjct: 613 YQPSAVPQTNYQPAVPQTNYQPSAVPQTNYHPAVPKTNYQPSAVPQTNYQPAVPQTNYQP 672
Query: 183 AVAALMDIALAIVVEVYHPPAVP 251
+ + + V + + PAVP
Sbjct: 673 SAVPQTNYQPSAVPQTNYHPAVP 695
Score = 33.5 bits (73), Expect = 2.7
Identities = 22/83 (26%), Positives = 32/83 (38%)
Frame = +3
Query: 3 FRPLAVPVTPIQAQKVQDPVHPAVAALMDIAPAIVVEAYHPPAVPATLIQAQRMQDPVHL 182
++P AVP T Q V + + PA+ Y P AVP T Q + +
Sbjct: 508 YQPAAVPQTNYQPAAVPQTNYQPAVPQTNYQPAVPQTNYQPAAVPQTNYQPAAVPQTNYQ 567
Query: 183 AVAALMDIALAIVVEVYHPPAVP 251
+ A V + + PAVP
Sbjct: 568 PAVPQTNYQPAAVPQTNYQPAVP 590
Score = 33.5 bits (73), Expect = 2.7
Identities = 29/84 (34%), Positives = 35/84 (41%), Gaps = 1/84 (1%)
Frame = +3
Query: 3 FRPLAVPVTPIQAQKVQDPVHPAVAALMDIAPAIVVEA-YHPPAVPATLIQAQRMQDPVH 179
++P AVP T Q Q PAV + PA V + Y P AVP T Q Q
Sbjct: 518 YQPAAVPQTNYQPAVPQTNYQPAVPQT-NYQPAAVPQTNYQPAAVPQTNYQPAVPQTNYQ 576
Query: 180 LAVAALMDIALAIVVEVYHPPAVP 251
A + A+ YH PAVP
Sbjct: 577 PAAVPQTNYQPAVPQTNYH-PAVP 599
Score = 33.5 bits (73), Expect = 2.7
Identities = 22/81 (27%), Positives = 33/81 (40%), Gaps = 1/81 (1%)
Frame = +3
Query: 3 FRPLAVPVTPIQAQKVQDPVHPAVAALMDIAPAIVVEAYHPPAVPATLIQAQRMQDPVHL 182
++P AVP T Q Q P+ + P+ V + + PAVP T Q + +
Sbjct: 651 YQPSAVPQTNYQPAVPQTNYQPSAVPQTNYQPSAVPQTNYHPAVPKTNYQPSAVPQTNYQ 710
Query: 183 AVAALMDIALAIVVEV-YHPP 242
+ A V + YHPP
Sbjct: 711 PAVPQTNYQPAAVPQTNYHPP 731
>UniRef50_A7S7N0 Cluster: Predicted protein; n=3; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 161
Score = 35.5 bits (78), Expect = 0.67
Identities = 16/62 (25%), Positives = 30/62 (48%), Gaps = 3/62 (4%)
Frame = -3
Query: 200 HKCCYRQMYWILHSLCLNQCCWNCRWMIRF---HHDGWSYIHKCCYRRMYGILHFLSLNR 30
H+ CY+ Y I + L + C+ + I + + + H+ CY+ +Y I + L+
Sbjct: 57 HRICYKLTYRICYKLTYDLICYKLTYRICYKLTYRICYKLTHRICYKLIYRICYKLTYRI 116
Query: 29 CY 24
CY
Sbjct: 117 CY 118
>UniRef50_Q02910 Cluster: Calphotin; n=2; Drosophila
melanogaster|Rep: Calphotin - Drosophila melanogaster
(Fruit fly)
Length = 864
Score = 34.7 bits (76), Expect = 1.2
Identities = 23/82 (28%), Positives = 33/82 (40%)
Frame = +3
Query: 9 PLAVPVTPIQAQKVQDPVHPAVAALMDIAPAIVVEAYHPPAVPATLIQAQRMQDPVHLAV 188
P+A PVTP V PA A AP V PP + + + P +A
Sbjct: 13 PVAAPVTPSAVAAPVQVVSPAAVAPAPAAPIAVTPVAPPPTLASVQPATVTIPAPAPIAA 72
Query: 189 AALMDIALAIVVEVYHPPAVPA 254
A++ +A ++ V P PA
Sbjct: 73 ASVAPVA-SVAPPVVAAPTPPA 93
>UniRef50_UPI0000D9E378 Cluster: PREDICTED: hypothetical protein;
n=1; Macaca mulatta|Rep: PREDICTED: hypothetical protein
- Macaca mulatta
Length = 218
Score = 34.3 bits (75), Expect = 1.5
Identities = 26/79 (32%), Positives = 32/79 (40%), Gaps = 1/79 (1%)
Frame = +3
Query: 6 RPLAVPVTPIQAQKVQDPVHPAVAALMDIAPAIVVE-AYHPPAVPATLIQAQRMQDPVHL 182
RPLAV V+ P PAV + PA + A PPA PA + A V L
Sbjct: 119 RPLAVAPAAAAQSAVRPPATPAV-----VCPAAAAQSAVRPPAAPAVVCPAAAAHSAVRL 173
Query: 183 AVAALMDIALAIVVEVYHP 239
A + A A V + P
Sbjct: 174 PAAVQLAAAPAAVDPLIEP 192
>UniRef50_Q3MKM9 Cluster: Slit-like 2 protein; n=3; Danio rerio|Rep:
Slit-like 2 protein - Danio rerio (Zebrafish)
(Brachydanio rerio)
Length = 688
Score = 34.3 bits (75), Expect = 1.5
Identities = 20/64 (31%), Positives = 34/64 (53%)
Frame = +3
Query: 39 AQKVQDPVHPAVAALMDIAPAIVVEAYHPPAVPATLIQAQRMQDPVHLAVAALMDIALAI 218
A + +PVH +V+A M+ A + + H P+V T + P+ +AVA +M +A+
Sbjct: 547 ASPLGEPVHASVSACMEARTAGIPPSSHEPSVDRT--EPSSSLTPIVVAVAVVMVVAIIA 604
Query: 219 VVEV 230
V V
Sbjct: 605 TVVV 608
>UniRef50_A7SB40 Cluster: Predicted protein; n=3; Fungi/Metazoa
group|Rep: Predicted protein - Nematostella vectensis
Length = 655
Score = 34.3 bits (75), Expect = 1.5
Identities = 25/79 (31%), Positives = 38/79 (48%)
Frame = +3
Query: 12 LAVPVTPIQAQKVQDPVHPAVAALMDIAPAIVVEAYHPPAVPATLIQAQRMQDPVHLAVA 191
+AV V V V AVA +D+ A+ V+ AV T+ A + V +AVA
Sbjct: 468 VAVAVAVAVTVAVAVAVAVAVAVAVDVVVAVAVDVVVAVAVAVTVAVAVAVAVDVVVAVA 527
Query: 192 ALMDIALAIVVEVYHPPAV 248
++ +A+A+ V P AV
Sbjct: 528 VVVAVAVAVAAAVAVPVAV 546
>UniRef50_UPI0000D56375 Cluster: PREDICTED: hypothetical protein;
n=1; Tribolium castaneum|Rep: PREDICTED: hypothetical
protein - Tribolium castaneum
Length = 469
Score = 33.9 bits (74), Expect = 2.0
Identities = 23/80 (28%), Positives = 37/80 (46%), Gaps = 3/80 (3%)
Frame = +3
Query: 21 PVTPIQAQKVQDPVHPAVAALMDIAPAIVVEAYHPPAVPATLIQAQRMQDPVHLAV-AAL 197
P T +Q Q V++ P V + APA+ + +PPA P ++Q + AA+
Sbjct: 84 PATIVQPQIVEEIKTPVVTEIHYNAPAVDIVKPYPPAAPVEVVQPVVHEQVAQFPYPAAV 143
Query: 198 MDIALAIVVEVYH--PPAVP 251
++ IV E + PP P
Sbjct: 144 VEEIQPIVTEYNYNFPPVAP 163
>UniRef50_A4JWH2 Cluster: Putative uncharacterized protein; n=1;
Burkholderia vietnamiensis G4|Rep: Putative
uncharacterized protein - Burkholderia vietnamiensis
(strain G4 / LMG 22486) (Burkholderiacepacia (strain
R1808))
Length = 890
Score = 33.5 bits (73), Expect = 2.7
Identities = 20/57 (35%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = +3
Query: 9 PLAVPVTPIQ-AQKVQDPVHPAVAALMDIAPAIVVEAYHPPAVPATLIQAQRMQDPV 176
P A PV P++ A V+ P + +APAI EA P PA + Q +PV
Sbjct: 406 PAAAPVEPVEPAAVVETQPKPVIDPETPVAPAIDPEAPAEPEAPAVVAQEAPAANPV 462
>UniRef50_Q9VMV9 Cluster: CG33113-PF, isoform F; n=11;
Endopterygota|Rep: CG33113-PF, isoform F - Drosophila
melanogaster (Fruit fly)
Length = 595
Score = 33.5 bits (73), Expect = 2.7
Identities = 20/48 (41%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = +3
Query: 6 RPLAVPVTPIQAQKVQDPVHPAVA-ALMDIAPAIVVEAYHPPAVPATL 146
R + P+ P Q PV PA A A+ D APA+ PAVPA L
Sbjct: 122 RGFSAPLAPFSETVAQAPVIPAQAPAVPDHAPAVPAPVAPAPAVPAPL 169
>UniRef50_Q69NX2 Cluster: Putative fanconi anemia, complementation
group D2; n=1; Oryza sativa (japonica
cultivar-group)|Rep: Putative fanconi anemia,
complementation group D2 - Oryza sativa subsp. japonica
(Rice)
Length = 1211
Score = 33.1 bits (72), Expect = 3.6
Identities = 24/73 (32%), Positives = 33/73 (45%)
Frame = +3
Query: 27 TPIQAQKVQDPVHPAVAALMDIAPAIVVEAYHPPAVPATLIQAQRMQDPVHLAVAALMDI 206
TP A V A A L + ++V + PPA+P+ L A R+ + A AAL D
Sbjct: 33 TPDDASS-SSAVDDAAALLAEAGCTLLVPLHQPPALPSPLSFAPRLARALAAADAALRDR 91
Query: 207 ALAIVVEVYHPPA 245
LA + PA
Sbjct: 92 LLAGLAAFAESPA 104
>UniRef50_Q0D8J4 Cluster: Os07g0154400 protein; n=3; Oryza
sativa|Rep: Os07g0154400 protein - Oryza sativa subsp.
japonica (Rice)
Length = 1549
Score = 33.1 bits (72), Expect = 3.6
Identities = 24/73 (32%), Positives = 33/73 (45%)
Frame = +3
Query: 27 TPIQAQKVQDPVHPAVAALMDIAPAIVVEAYHPPAVPATLIQAQRMQDPVHLAVAALMDI 206
TP A V A A L + ++V + PPA+P+ L A R+ + A AAL D
Sbjct: 126 TPDDASS-SSAVDDAAALLAEAGCTLLVPLHQPPALPSPLSFAPRLARALAAADAALRDR 184
Query: 207 ALAIVVEVYHPPA 245
LA + PA
Sbjct: 185 LLAGLAAFAESPA 197
>UniRef50_A7ME55 Cluster: Putative uncharacterized protein; n=1;
Enterobacter sakazakii ATCC BAA-894|Rep: Putative
uncharacterized protein - Enterobacter sakazakii ATCC
BAA-894
Length = 846
Score = 32.3 bits (70), Expect = 6.2
Identities = 26/79 (32%), Positives = 36/79 (45%), Gaps = 2/79 (2%)
Frame = +3
Query: 24 VTP--IQAQKVQDPVHPAVAALMDIAPAIVVEAYHPPAVPATLIQAQRMQDPVHLAVAAL 197
+TP +Q V+ +PA+AAL +AP + A P A + + RM V + AAL
Sbjct: 104 ITPALLQELNVKTDAYPALAALAPLAPIEDIGALIPAA--SVRLNTHRMALEVSIPQAAL 161
Query: 198 MDIALAIVVEVYHPPAVPA 254
A V Y VPA
Sbjct: 162 RHTARGYVDPQYWDDGVPA 180
>UniRef50_UPI0000E47703 Cluster: PREDICTED: similar to ankyrin
2,3/unc44; n=1; Strongylocentrotus purpuratus|Rep:
PREDICTED: similar to ankyrin 2,3/unc44 -
Strongylocentrotus purpuratus
Length = 2818
Score = 31.9 bits (69), Expect = 8.2
Identities = 19/67 (28%), Positives = 30/67 (44%)
Frame = -3
Query: 224 HHDG*SYIHKCCYRQMYWILHSLCLNQCCWNCRWMIRFHHDGWSYIHKCCYRRMYGILHF 45
+ DG S +H CY I+ L + N + +HDGW+ +H I+ F
Sbjct: 2441 NEDGKSPLHAACYNGNIDIMKFLVHHNANVNEQ-----NHDGWTPLHAAAQEEHQDIVDF 2495
Query: 44 LSLNRCY 24
L+LN +
Sbjct: 2496 LTLNEAH 2502
>UniRef50_Q8DKQ0 Cluster: Tlr0809 protein; n=5; Cyanobacteria|Rep:
Tlr0809 protein - Synechococcus elongatus
(Thermosynechococcus elongatus)
Length = 361
Score = 31.9 bits (69), Expect = 8.2
Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = +3
Query: 9 PLAVPVTPIQAQKVQDPVHPAVAALMDIAPA-IVVEAYHPPAVPATLIQAQRMQDPV 176
PL P+T I AQ P+ + L ++ A ++ Y PP +P L Q QR+ D V
Sbjct: 47 PLETPLTLIDAQYQSIPL--TLGELAELTDANCPLQLYVPPPLPEALTQFQRLMDVV 101
>UniRef50_A1AMH9 Cluster: Radical SAM domain protein; n=1;
Pelobacter propionicus DSM 2379|Rep: Radical SAM domain
protein - Pelobacter propionicus (strain DSM 2379)
Length = 451
Score = 31.9 bits (69), Expect = 8.2
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -3
Query: 353 WXIRVHXDAWSYIRKCLLPPDVLDXALFVLESV 255
W R +A++ +R CL PPD +D L VL +
Sbjct: 395 WLERTLTEAFAGVRHCLFPPDCMDNCLNVLHKL 427
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 408,837,427
Number of Sequences: 1657284
Number of extensions: 7611938
Number of successful extensions: 17050
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 15325
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16979
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 29273652170
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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