Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0305.Seq
(499 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_8550| Best HMM Match : MASE1 (HMM E-Value=1.5) 31 0.40
SB_42244| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.53
SB_32904| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.53
SB_49209| Best HMM Match : Vicilin_N (HMM E-Value=0.23) 30 1.2
SB_55174| Best HMM Match : AP_endonuc_2 (HMM E-Value=2.4e-36) 29 1.6
SB_21842| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.8
SB_17419| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.7
>SB_8550| Best HMM Match : MASE1 (HMM E-Value=1.5)
Length = 317
Score = 31.5 bits (68), Expect = 0.40
Identities = 25/73 (34%), Positives = 35/73 (47%)
Frame = +3
Query: 12 LAVPVTPIQAQKVQDPVHPAVAALMDIAPAIVVEAYHPPAVPATLIQAQRMQDPVHLAVA 191
+AV V A V V AVA + +A AI V AV T+ A + V +AVA
Sbjct: 67 VAVAVAVAVAVAVAVAVAGAVAIAITVAIAIAVAVAGAVAVAVTVAVAVAVAVAVAVAVA 126
Query: 192 ALMDIALAIVVEV 230
+ +A+A+ V V
Sbjct: 127 VAVAVAIAVAVAV 139
Score = 27.1 bits (57), Expect = 8.6
Identities = 24/79 (30%), Positives = 35/79 (44%)
Frame = +3
Query: 12 LAVPVTPIQAQKVQDPVHPAVAALMDIAPAIVVEAYHPPAVPATLIQAQRMQDPVHLAVA 191
+AV V A + + AVA + +A AI + AV + A + V AVA
Sbjct: 29 IAVAVAVAVAVAIAIAIAVAVAVAVAVAVAIAIAIAIAVAVAVAVAVAVAVAVAVAGAVA 88
Query: 192 ALMDIALAIVVEVYHPPAV 248
+ +A+AI V V AV
Sbjct: 89 IAITVAIAIAVAVAGAVAV 107
>SB_42244| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 870
Score = 31.1 bits (67), Expect = 0.53
Identities = 14/44 (31%), Positives = 20/44 (45%)
Frame = +3
Query: 63 HPAVAALMDIAPAIVVEAYHPPAVPATLIQAQRMQDPVHLAVAA 194
HP A + P+ V A H PA P L + P+H+ +A
Sbjct: 275 HPIPVATSKVPPSGVSSAPHKPAQPGLLAHFSQTHSPLHMPTSA 318
>SB_32904| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 477
Score = 31.1 bits (67), Expect = 0.53
Identities = 25/73 (34%), Positives = 35/73 (47%)
Frame = +3
Query: 12 LAVPVTPIQAQKVQDPVHPAVAALMDIAPAIVVEAYHPPAVPATLIQAQRMQDPVHLAVA 191
+AV V A V V AVAA + +A AI V AV + A + V +AVA
Sbjct: 242 VAVAVAVAVAVAVAIAVAVAVAAAVAVAVAIAVAVAVAVAVAVAVAVAVAVAIAVAVAVA 301
Query: 192 ALMDIALAIVVEV 230
+ IA+AI + +
Sbjct: 302 VAVAIAIAIAIAI 314
Score = 29.1 bits (62), Expect = 2.1
Identities = 25/72 (34%), Positives = 34/72 (47%)
Frame = +3
Query: 15 AVPVTPIQAQKVQDPVHPAVAALMDIAPAIVVEAYHPPAVPATLIQAQRMQDPVHLAVAA 194
+V V A V V AVA + IA A+ V A AV + A + V +AVA
Sbjct: 231 SVAVAVAVAVAVAVAVAVAVAVAVAIAVAVAVAAAVAVAVAIAVAVAVAVAVAVAVAVAV 290
Query: 195 LMDIALAIVVEV 230
+ IA+A+ V V
Sbjct: 291 AVAIAVAVAVAV 302
Score = 29.1 bits (62), Expect = 2.1
Identities = 25/73 (34%), Positives = 34/73 (46%)
Frame = +3
Query: 12 LAVPVTPIQAQKVQDPVHPAVAALMDIAPAIVVEAYHPPAVPATLIQAQRMQDPVHLAVA 191
+AV V A V V AVA + IA A+ V AV + A + V +AVA
Sbjct: 246 VAVAVAVAVAIAVAVAVAAAVAVAVAIAVAVAVAVAVAVAVAVAVAVAIAVAVAVAVAVA 305
Query: 192 ALMDIALAIVVEV 230
+ IA+AI + V
Sbjct: 306 IAIAIAIAIAIAV 318
Score = 29.1 bits (62), Expect = 2.1
Identities = 23/73 (31%), Positives = 34/73 (46%)
Frame = +3
Query: 12 LAVPVTPIQAQKVQDPVHPAVAALMDIAPAIVVEAYHPPAVPATLIQAQRMQDPVHLAVA 191
+AV V A V V AVA + +A A+ V AV + A + V +AVA
Sbjct: 322 VAVAVAVAVAVAVAIAVAVAVAVAVAVAVAVAVAVAVAVAVAVAVAVAVAVAVAVAIAVA 381
Query: 192 ALMDIALAIVVEV 230
+ +A+AI + V
Sbjct: 382 VAVAVAVAIAIAV 394
Score = 29.1 bits (62), Expect = 2.1
Identities = 24/73 (32%), Positives = 34/73 (46%)
Frame = +3
Query: 12 LAVPVTPIQAQKVQDPVHPAVAALMDIAPAIVVEAYHPPAVPATLIQAQRMQDPVHLAVA 191
+AV V A V V AVA + +A A+ V AV + A + V +AVA
Sbjct: 326 VAVAVAVAVAIAVAVAVAVAVAVAVAVAVAVAVAVAVAVAVAVAVAVAVAVAIAVAVAVA 385
Query: 192 ALMDIALAIVVEV 230
+ IA+A+ V V
Sbjct: 386 VAVAIAIAVAVAV 398
Score = 29.1 bits (62), Expect = 2.1
Identities = 24/73 (32%), Positives = 34/73 (46%)
Frame = +3
Query: 12 LAVPVTPIQAQKVQDPVHPAVAALMDIAPAIVVEAYHPPAVPATLIQAQRMQDPVHLAVA 191
+AV V A V V AVA + +A AI V AV + A + V +AVA
Sbjct: 348 VAVAVAVAVAVAVAVAVAVAVAVAVAVAVAIAVAVAVAVAVAIAIAVAVAVAVAVAVAVA 407
Query: 192 ALMDIALAIVVEV 230
+ +A+A+ V V
Sbjct: 408 VAVAVAVAVAVAV 420
Score = 29.1 bits (62), Expect = 2.1
Identities = 25/81 (30%), Positives = 37/81 (45%)
Frame = +3
Query: 12 LAVPVTPIQAQKVQDPVHPAVAALMDIAPAIVVEAYHPPAVPATLIQAQRMQDPVHLAVA 191
+AV V A V + AVA + +A AI V AV + A + V +AVA
Sbjct: 362 VAVAVAVAVAVAVAVAIAVAVAVAVAVAIAIAVAVAVAVAVAVAVAVAVAVAVAVAVAVA 421
Query: 192 ALMDIALAIVVEVYHPPAVPA 254
+ IA+A+ + + AV A
Sbjct: 422 VAIAIAVAVAIAIAIAVAVAA 442
Score = 28.7 bits (61), Expect = 2.8
Identities = 24/73 (32%), Positives = 34/73 (46%)
Frame = +3
Query: 12 LAVPVTPIQAQKVQDPVHPAVAALMDIAPAIVVEAYHPPAVPATLIQAQRMQDPVHLAVA 191
+AV V A V V AVA + IA AI + AV + A + V +AVA
Sbjct: 280 VAVAVAVAVAVAVAIAVAVAVAVAVAIAIAIAIAIAIAVAVAVAVAVAVAVAVAVAIAVA 339
Query: 192 ALMDIALAIVVEV 230
+ +A+A+ V V
Sbjct: 340 VAVAVAVAVAVAV 352
Score = 28.7 bits (61), Expect = 2.8
Identities = 23/73 (31%), Positives = 34/73 (46%)
Frame = +3
Query: 12 LAVPVTPIQAQKVQDPVHPAVAALMDIAPAIVVEAYHPPAVPATLIQAQRMQDPVHLAVA 191
+A+ + A V V AVA + IA A+ V AV + A + V +AVA
Sbjct: 310 IAIAIAIAVAVAVAVAVAVAVAVAVAIAVAVAVAVAVAVAVAVAVAVAVAVAVAVAVAVA 369
Query: 192 ALMDIALAIVVEV 230
+ +A+AI V V
Sbjct: 370 VAVAVAVAIAVAV 382
Score = 28.7 bits (61), Expect = 2.8
Identities = 21/73 (28%), Positives = 34/73 (46%)
Frame = +3
Query: 12 LAVPVTPIQAQKVQDPVHPAVAALMDIAPAIVVEAYHPPAVPATLIQAQRMQDPVHLAVA 191
+A+ + A V V AVA + +A A+ V AV + A + V +AVA
Sbjct: 312 IAIAIAVAVAVAVAVAVAVAVAVAIAVAVAVAVAVAVAVAVAVAVAVAVAVAVAVAVAVA 371
Query: 192 ALMDIALAIVVEV 230
+ +A+A+ V V
Sbjct: 372 VAVAVAIAVAVAV 384
Score = 28.7 bits (61), Expect = 2.8
Identities = 23/73 (31%), Positives = 34/73 (46%)
Frame = +3
Query: 12 LAVPVTPIQAQKVQDPVHPAVAALMDIAPAIVVEAYHPPAVPATLIQAQRMQDPVHLAVA 191
+A+ V A V V AVA + +A A+ V AV + A + V +AVA
Sbjct: 314 IAIAVAVAVAVAVAVAVAVAVAIAVAVAVAVAVAVAVAVAVAVAVAVAVAVAVAVAVAVA 373
Query: 192 ALMDIALAIVVEV 230
+ IA+A+ V V
Sbjct: 374 VAVAIAVAVAVAV 386
Score = 28.7 bits (61), Expect = 2.8
Identities = 22/73 (30%), Positives = 34/73 (46%)
Frame = +3
Query: 12 LAVPVTPIQAQKVQDPVHPAVAALMDIAPAIVVEAYHPPAVPATLIQAQRMQDPVHLAVA 191
+AV V A + V AVA + +A A+ V AV + A + + +AVA
Sbjct: 324 VAVAVAVAVAVAIAVAVAVAVAVAVAVAVAVAVAVAVAVAVAVAVAVAVAVAVAIAVAVA 383
Query: 192 ALMDIALAIVVEV 230
+ +A+AI V V
Sbjct: 384 VAVAVAIAIAVAV 396
Score = 28.7 bits (61), Expect = 2.8
Identities = 24/73 (32%), Positives = 34/73 (46%)
Frame = +3
Query: 12 LAVPVTPIQAQKVQDPVHPAVAALMDIAPAIVVEAYHPPAVPATLIQAQRMQDPVHLAVA 191
+AV V A V V AVA + +A A+ V AV + A + V +AVA
Sbjct: 328 VAVAVAVAIAVAVAVAVAVAVAVAVAVAVAVAVAVAVAVAVAVAVAVAVAIAVAVAVAVA 387
Query: 192 ALMDIALAIVVEV 230
+ IA+A+ V V
Sbjct: 388 VAIAIAVAVAVAV 400
Score = 28.7 bits (61), Expect = 2.8
Identities = 22/73 (30%), Positives = 34/73 (46%)
Frame = +3
Query: 12 LAVPVTPIQAQKVQDPVHPAVAALMDIAPAIVVEAYHPPAVPATLIQAQRMQDPVHLAVA 191
+AV V A V V AVA + +A A+ V AV + A + + +AVA
Sbjct: 336 IAVAVAVAVAVAVAVAVAVAVAVAVAVAVAVAVAVAVAVAVAIAVAVAVAVAVAIAIAVA 395
Query: 192 ALMDIALAIVVEV 230
+ +A+A+ V V
Sbjct: 396 VAVAVAVAVAVAV 408
Score = 28.7 bits (61), Expect = 2.8
Identities = 23/73 (31%), Positives = 34/73 (46%)
Frame = +3
Query: 12 LAVPVTPIQAQKVQDPVHPAVAALMDIAPAIVVEAYHPPAVPATLIQAQRMQDPVHLAVA 191
+AV V A V V AVA + +A AI + AV + A + V +AVA
Sbjct: 360 VAVAVAVAVAVAVAVAVAIAVAVAVAVAVAIAIAVAVAVAVAVAVAVAVAVAVAVAVAVA 419
Query: 192 ALMDIALAIVVEV 230
+ IA+A+ V +
Sbjct: 420 VAVAIAIAVAVAI 432
Score = 28.3 bits (60), Expect = 3.7
Identities = 23/73 (31%), Positives = 34/73 (46%)
Frame = +3
Query: 12 LAVPVTPIQAQKVQDPVHPAVAALMDIAPAIVVEAYHPPAVPATLIQAQRMQDPVHLAVA 191
+AV V A V V AVA + +A A+ V AV + A + V +AVA
Sbjct: 340 VAVAVAVAVAVAVAVAVAVAVAVAVAVAVAVAVAVAVAIAVAVAVAVAVAIAIAVAVAVA 399
Query: 192 ALMDIALAIVVEV 230
+ +A+A+ V V
Sbjct: 400 VAVAVAVAVAVAV 412
Score = 28.3 bits (60), Expect = 3.7
Identities = 23/73 (31%), Positives = 34/73 (46%)
Frame = +3
Query: 12 LAVPVTPIQAQKVQDPVHPAVAALMDIAPAIVVEAYHPPAVPATLIQAQRMQDPVHLAVA 191
+AV V A V V AVA + +A A+ V AV + A + V +AVA
Sbjct: 342 VAVAVAVAVAVAVAVAVAVAVAVAVAVAVAVAVAVAIAVAVAVAVAVAIAIAVAVAVAVA 401
Query: 192 ALMDIALAIVVEV 230
+ +A+A+ V V
Sbjct: 402 VAVAVAVAVAVAV 414
Score = 28.3 bits (60), Expect = 3.7
Identities = 22/73 (30%), Positives = 34/73 (46%)
Frame = +3
Query: 12 LAVPVTPIQAQKVQDPVHPAVAALMDIAPAIVVEAYHPPAVPATLIQAQRMQDPVHLAVA 191
+AV V A V V AVA + +A A+ + AV + A + V +AVA
Sbjct: 346 VAVAVAVAVAVAVAVAVAVAVAVAVAVAVAVAIAVAVAVAVAVAIAIAVAVAVAVAVAVA 405
Query: 192 ALMDIALAIVVEV 230
+ +A+A+ V V
Sbjct: 406 VAVAVAVAVAVAV 418
Score = 27.9 bits (59), Expect = 4.9
Identities = 23/73 (31%), Positives = 34/73 (46%)
Frame = +3
Query: 12 LAVPVTPIQAQKVQDPVHPAVAALMDIAPAIVVEAYHPPAVPATLIQAQRMQDPVHLAVA 191
+AV V A V V AVA + +A A+ V A+ + A + V +AVA
Sbjct: 272 IAVAVAVAVAVAVAVAVAVAVAIAVAVAVAVAVAIAIAIAIAIAIAVAVAVAVAVAVAVA 331
Query: 192 ALMDIALAIVVEV 230
+ IA+A+ V V
Sbjct: 332 VAVAIAVAVAVAV 344
Score = 27.9 bits (59), Expect = 4.9
Identities = 24/73 (32%), Positives = 34/73 (46%)
Frame = +3
Query: 12 LAVPVTPIQAQKVQDPVHPAVAALMDIAPAIVVEAYHPPAVPATLIQAQRMQDPVHLAVA 191
+AV V A V V AVA + IA AI + AV + A + V +AVA
Sbjct: 284 VAVAVAVAVAIAVAVAVAVAVAIAIAIAIAIAIAVAVAVAVAVAVAVAVAVAIAVAVAVA 343
Query: 192 ALMDIALAIVVEV 230
+ +A+A+ V V
Sbjct: 344 VAVAVAVAVAVAV 356
Score = 27.9 bits (59), Expect = 4.9
Identities = 21/73 (28%), Positives = 34/73 (46%)
Frame = +3
Query: 12 LAVPVTPIQAQKVQDPVHPAVAALMDIAPAIVVEAYHPPAVPATLIQAQRMQDPVHLAVA 191
+AV V A V V AVA + +A A+ V A+ + A + + +AVA
Sbjct: 338 VAVAVAVAVAVAVAVAVAVAVAVAVAVAVAVAVAVAVAVAIAVAVAVAVAVAIAIAVAVA 397
Query: 192 ALMDIALAIVVEV 230
+ +A+A+ V V
Sbjct: 398 VAVAVAVAVAVAV 410
Score = 27.9 bits (59), Expect = 4.9
Identities = 22/73 (30%), Positives = 34/73 (46%)
Frame = +3
Query: 12 LAVPVTPIQAQKVQDPVHPAVAALMDIAPAIVVEAYHPPAVPATLIQAQRMQDPVHLAVA 191
+AV V A V V AVA + IA A+ V A+ + A + V +AVA
Sbjct: 352 VAVAVAVAVAVAVAVAVAVAVAVAVAIAVAVAVAVAVAIAIAVAVAVAVAVAVAVAVAVA 411
Query: 192 ALMDIALAIVVEV 230
+ +A+A+ V +
Sbjct: 412 VAVAVAVAVAVAI 424
Score = 27.9 bits (59), Expect = 4.9
Identities = 23/73 (31%), Positives = 34/73 (46%)
Frame = +3
Query: 12 LAVPVTPIQAQKVQDPVHPAVAALMDIAPAIVVEAYHPPAVPATLIQAQRMQDPVHLAVA 191
+AV V A V V AVA + +A A+ V AV + A + V +AVA
Sbjct: 356 VAVAVAVAVAVAVAVAVAVAVAIAVAVAVAVAVAIAIAVAVAVAVAVAVAVAVAVAVAVA 415
Query: 192 ALMDIALAIVVEV 230
+ +A+AI + V
Sbjct: 416 VAVAVAVAIAIAV 428
Score = 27.5 bits (58), Expect = 6.5
Identities = 23/73 (31%), Positives = 34/73 (46%)
Frame = +3
Query: 12 LAVPVTPIQAQKVQDPVHPAVAALMDIAPAIVVEAYHPPAVPATLIQAQRMQDPVHLAVA 191
+AV + A V V AVA + IA A+ V A+ + A + V +AVA
Sbjct: 268 VAVAIAVAVAVAVAVAVAVAVAVAVAIAVAVAVAVAVAIAIAIAIAIAIAVAVAVAVAVA 327
Query: 192 ALMDIALAIVVEV 230
+ +A+AI V V
Sbjct: 328 VAVAVAVAIAVAV 340
Score = 27.5 bits (58), Expect = 6.5
Identities = 21/73 (28%), Positives = 34/73 (46%)
Frame = +3
Query: 12 LAVPVTPIQAQKVQDPVHPAVAALMDIAPAIVVEAYHPPAVPATLIQAQRMQDPVHLAVA 191
+A+ V A V V AVA + +A A+ V A+ + A + V +AVA
Sbjct: 270 VAIAVAVAVAVAVAVAVAVAVAVAIAVAVAVAVAVAIAIAIAIAIAIAVAVAVAVAVAVA 329
Query: 192 ALMDIALAIVVEV 230
+ +A+A+ V V
Sbjct: 330 VAVAVAIAVAVAV 342
Score = 27.5 bits (58), Expect = 6.5
Identities = 22/73 (30%), Positives = 34/73 (46%)
Frame = +3
Query: 12 LAVPVTPIQAQKVQDPVHPAVAALMDIAPAIVVEAYHPPAVPATLIQAQRMQDPVHLAVA 191
+AV V A + V AVA + IA AI + AV + A + + +AVA
Sbjct: 282 VAVAVAVAVAVAIAVAVAVAVAVAIAIAIAIAIAIAVAVAVAVAVAVAVAVAVAIAVAVA 341
Query: 192 ALMDIALAIVVEV 230
+ +A+A+ V V
Sbjct: 342 VAVAVAVAVAVAV 354
Score = 27.5 bits (58), Expect = 6.5
Identities = 22/73 (30%), Positives = 34/73 (46%)
Frame = +3
Query: 12 LAVPVTPIQAQKVQDPVHPAVAALMDIAPAIVVEAYHPPAVPATLIQAQRMQDPVHLAVA 191
+AV V A V V AVA + +A A+ V AV + A + V +AVA
Sbjct: 318 VAVAVAVAVAVAVAVAVAIAVAVAVAVAVAVAVAVAVAVAVAVAVAVAVAVAVAVAVAVA 377
Query: 192 ALMDIALAIVVEV 230
+ +A+A+ V +
Sbjct: 378 IAVAVAVAVAVAI 390
Score = 27.5 bits (58), Expect = 6.5
Identities = 23/73 (31%), Positives = 34/73 (46%)
Frame = +3
Query: 12 LAVPVTPIQAQKVQDPVHPAVAALMDIAPAIVVEAYHPPAVPATLIQAQRMQDPVHLAVA 191
+AV V A V V AVA + +A A+ V AV + A + V +AVA
Sbjct: 330 VAVAVAIAVAVAVAVAVAVAVAVAVAVAVAVAVAVAVAVAVAVAVAVAIAVAVAVAVAVA 389
Query: 192 ALMDIALAIVVEV 230
+ +A+A+ V V
Sbjct: 390 IAIAVAVAVAVAV 402
Score = 27.5 bits (58), Expect = 6.5
Identities = 23/73 (31%), Positives = 34/73 (46%)
Frame = +3
Query: 12 LAVPVTPIQAQKVQDPVHPAVAALMDIAPAIVVEAYHPPAVPATLIQAQRMQDPVHLAVA 191
+AV V A V V AVA + +A A+ V AV + A + V +AVA
Sbjct: 344 VAVAVAVAVAVAVAVAVAVAVAVAVAVAVAVAVAIAVAVAVAVAVAIAIAVAVAVAVAVA 403
Query: 192 ALMDIALAIVVEV 230
+ +A+A+ V V
Sbjct: 404 VAVAVAVAVAVAV 416
Score = 27.5 bits (58), Expect = 6.5
Identities = 22/73 (30%), Positives = 34/73 (46%)
Frame = +3
Query: 12 LAVPVTPIQAQKVQDPVHPAVAALMDIAPAIVVEAYHPPAVPATLIQAQRMQDPVHLAVA 191
+AV V A V V AVA + +A A+ V A+ + A + V +AVA
Sbjct: 350 VAVAVAVAVAVAVAVAVAVAVAVAVAVAIAVAVAVAVAVAIAIAVAVAVAVAVAVAVAVA 409
Query: 192 ALMDIALAIVVEV 230
+ +A+A+ V V
Sbjct: 410 VAVAVAVAVAVAV 422
Score = 27.5 bits (58), Expect = 6.5
Identities = 21/73 (28%), Positives = 34/73 (46%)
Frame = +3
Query: 12 LAVPVTPIQAQKVQDPVHPAVAALMDIAPAIVVEAYHPPAVPATLIQAQRMQDPVHLAVA 191
+AV V A V V AVA + +A A+ V AV + A + V +AVA
Sbjct: 354 VAVAVAVAVAVAVAVAVAVAVAVAIAVAVAVAVAVAIAIAVAVAVAVAVAVAVAVAVAVA 413
Query: 192 ALMDIALAIVVEV 230
+ +A+A+ + +
Sbjct: 414 VAVAVAVAVAIAI 426
Score = 27.1 bits (57), Expect = 8.6
Identities = 23/72 (31%), Positives = 33/72 (45%)
Frame = +3
Query: 15 AVPVTPIQAQKVQDPVHPAVAALMDIAPAIVVEAYHPPAVPATLIQAQRMQDPVHLAVAA 194
AV V A V V AVA + +A AI V AV + A + V +AVA
Sbjct: 265 AVAVAVAIAVAVAVAVAVAVAVAVAVAVAIAVAVAVAVAVAIAIAIAIAIAIAVAVAVAV 324
Query: 195 LMDIALAIVVEV 230
+ +A+A+ V +
Sbjct: 325 AVAVAVAVAVAI 336
Score = 27.1 bits (57), Expect = 8.6
Identities = 21/73 (28%), Positives = 34/73 (46%)
Frame = +3
Query: 12 LAVPVTPIQAQKVQDPVHPAVAALMDIAPAIVVEAYHPPAVPATLIQAQRMQDPVHLAVA 191
+A+ + A V V AVA + +A AI V AV + A + V +AVA
Sbjct: 306 IAIAIAIAIAIAVAVAVAVAVAVAVAVAVAIAVAVAVAVAVAVAVAVAVAVAVAVAVAVA 365
Query: 192 ALMDIALAIVVEV 230
+ +A+A+ V +
Sbjct: 366 VAVAVAVAVAVAI 378
>SB_49209| Best HMM Match : Vicilin_N (HMM E-Value=0.23)
Length = 197
Score = 29.9 bits (64), Expect = 1.2
Identities = 20/79 (25%), Positives = 31/79 (39%)
Frame = -3
Query: 245 CRWMIHFHHDG*SYIHKCCYRQMYWILHSLCLNQCCWNCRWMIRFHHDGWSYIHKCCYRR 66
CRW + D IH C + + ++ C CRW + D + IH C
Sbjct: 115 CRWRLDRQAD----IHTCKSTCRWRLDRQADIHTCKSTCRWRL----DRQADIHTCKSTC 166
Query: 65 MYGILHFLSLNRCYWYCQW 9
+ I ++RC C+W
Sbjct: 167 RWRINRQADIHRCKSTCRW 185
>SB_55174| Best HMM Match : AP_endonuc_2 (HMM E-Value=2.4e-36)
Length = 260
Score = 29.5 bits (63), Expect = 1.6
Identities = 25/76 (32%), Positives = 34/76 (44%), Gaps = 1/76 (1%)
Frame = +3
Query: 12 LAVPVTPIQAQK-VQDPVHPAVAALMDIAPAIVVEAYHPPAVPATLIQAQRMQDPVHLAV 188
LA V P QA + D +H A + +VVEA +P +P LI D + AV
Sbjct: 108 LADGVEPEQALACLVDNLHKTAEAFQLLGIGVVVEAINPLDIPGFLINTPEQLDALLKAV 167
Query: 189 AALMDIALAIVVEVYH 236
A LA ++YH
Sbjct: 168 A---HPNLAAQYDLYH 180
>SB_21842| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 176
Score = 28.7 bits (61), Expect = 2.8
Identities = 16/53 (30%), Positives = 27/53 (50%)
Frame = +3
Query: 9 PLAVPVTPIQAQKVQDPVHPAVAALMDIAPAIVVEAYHPPAVPATLIQAQRMQ 167
P+ + VT + QKV +HP A+ D P+ +V+ PA+ +Q +Q
Sbjct: 118 PVFLSVTEDRVQKVLSKLHPRKASGPDNVPSKIVKEEKQYDEPASATDSQEIQ 170
>SB_17419| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 679
Score = 28.3 bits (60), Expect = 3.7
Identities = 13/28 (46%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Frame = +2
Query: 263 QAQRVXDPVHPAVASTYGYSS-RHXGGR 343
Q +R +P PA++ T+ YSS RH GR
Sbjct: 646 QKERSSEPDGPAISGTFNYSSFRHTKGR 673
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,976,132
Number of Sequences: 59808
Number of extensions: 261842
Number of successful extensions: 523
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 388
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 504
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1075029208
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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