Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0303.Seq
         (612 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            25   1.9  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            25   1.9  
CR954257-9|CAJ14160.1|  573|Anopheles gambiae putative esterase ...    23   5.9  
U03849-1|AAA53488.1|  388|Anopheles gambiae putative nucleic aci...    23   7.8  
AY578803-1|AAT07308.1|  474|Anopheles gambiae mothers against Dp...    23   7.8  

>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 25.0 bits (52), Expect = 1.9
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = -1

Query: 408 PFPNSL*VSLSSIFRHFDRP 349
           PFP +L  S SS+F  FD P
Sbjct: 884 PFPANLIKSSSSLFDRFDHP 903


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 25.0 bits (52), Expect = 1.9
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = -1

Query: 408 PFPNSL*VSLSSIFRHFDRP 349
           PFP +L  S SS+F  FD P
Sbjct: 885 PFPANLIKSSSSLFDRFDHP 904


>CR954257-9|CAJ14160.1|  573|Anopheles gambiae putative esterase
           protein.
          Length = 573

 Score = 23.4 bits (48), Expect = 5.9
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = -2

Query: 416 SSGHFQTLYKFLYLPYFDISIGRRFFRH 333
           S G F T Y F  +PY +  +G   FR+
Sbjct: 52  SCGLFCTYYSFKGIPYAEPPVGSLRFRN 79


>U03849-1|AAA53488.1|  388|Anopheles gambiae putative nucleic acid
           binding protein protein.
          Length = 388

 Score = 23.0 bits (47), Expect = 7.8
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = +2

Query: 47  TCLGVTEIRKNPRIPAQEEKSEQ 115
           +C+G T + KNPR  + +E   Q
Sbjct: 63  SCIGCTNMLKNPRCRSVKEIGAQ 85


>AY578803-1|AAT07308.1|  474|Anopheles gambiae mothers against Dpp
           protein.
          Length = 474

 Score = 23.0 bits (47), Expect = 7.8
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = +1

Query: 394 RVWKWPEEMEH 426
           RVW+WP+   H
Sbjct: 104 RVWRWPDLQSH 114


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 616,487
Number of Sequences: 2352
Number of extensions: 11402
Number of successful extensions: 28
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 59711994
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)