Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0300.Seq
(595 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P06576 Cluster: ATP synthase subunit beta, mitochondria... 156 4e-37
UniRef50_Q9C5A9 Cluster: ATP synthase subunit beta-3, mitochondr... 141 1e-32
UniRef50_O50341 Cluster: ATP synthase subunit beta; n=23; cellul... 133 3e-30
UniRef50_Q92LK8 Cluster: ATP synthase subunit beta; n=32; cellul... 131 1e-29
UniRef50_P00830 Cluster: ATP synthase subunit beta, mitochondria... 126 3e-28
UniRef50_Q5FRC5 Cluster: ATP synthase subunit beta; n=266; cellu... 126 4e-28
UniRef50_Q5NQY9 Cluster: ATP synthase subunit beta; n=169; cellu... 124 2e-27
UniRef50_P13356 Cluster: ATP synthase subunit beta; n=5; Bactero... 117 2e-25
UniRef50_A1ZPD5 Cluster: ATP synthase F1, beta subunit; n=4; Bac... 112 5e-24
UniRef50_Q9MTQ2 Cluster: ATP synthase subunit beta; n=2; Amphidi... 101 1e-20
UniRef50_Q2I6N8 Cluster: ATP synthase beta chain; n=2; Gonyaulax... 93 3e-18
UniRef50_Q4IW70 Cluster: ATP synthase F1, beta subunit; n=1; Azo... 92 8e-18
UniRef50_A5IFJ3 Cluster: ATP synthase F1, beta chain; n=3; Legio... 87 2e-16
UniRef50_Q62EB7 Cluster: ATP synthase F1, beta subunit; n=27; Ba... 87 3e-16
UniRef50_Q98QX4 Cluster: ATP SYNTHASE BETA CHAIN; n=1; Mycoplasm... 77 2e-13
UniRef50_A5AGS0 Cluster: Putative uncharacterized protein; n=1; ... 77 4e-13
UniRef50_Q6KIC3 Cluster: ATP synthase beta chain; n=1; Mycoplasm... 75 1e-12
UniRef50_Q98PM3 Cluster: ATP SYNTHASE BETA CHAIN; n=9; Mycoplasm... 73 4e-12
UniRef50_Q4PJ51 Cluster: Predicted F0F1-type ATP synthase beta s... 73 4e-12
UniRef50_Q98QB6 Cluster: ATP synthase subunit beta 2; n=5; Mycop... 69 8e-11
UniRef50_A0HLA3 Cluster: Putative uncharacterized protein; n=1; ... 66 6e-10
UniRef50_A3TUV5 Cluster: Putative uncharacterized protein; n=3; ... 57 4e-07
UniRef50_A0U258 Cluster: Putative uncharacterized protein; n=16;... 53 6e-06
UniRef50_Q67K17 Cluster: Flagellar-specific ATP synthase; n=1; S... 51 2e-05
UniRef50_A4M4Z6 Cluster: Putative uncharacterized protein; n=1; ... 47 3e-04
UniRef50_Q6D5F7 Cluster: Type III secretion protein; n=10; Enter... 47 4e-04
UniRef50_O67531 Cluster: Flagellum-specific ATP synthase; n=2; A... 46 9e-04
UniRef50_Q8TUT0 Cluster: V-type ATP synthase beta chain (EC 3.6.... 45 0.001
UniRef50_Q81SH1 Cluster: Flagellum-specific ATP synthase, putati... 45 0.002
UniRef50_A7DHD2 Cluster: Putative uncharacterized protein; n=1; ... 45 0.002
UniRef50_P23445 Cluster: Flagellum-specific ATP synthase; n=18; ... 42 0.008
UniRef50_A1T0I0 Cluster: ATPase, FliI/YscN family protein; n=1; ... 42 0.011
UniRef50_O83417 Cluster: Flagellum-specific ATP synthase; n=42; ... 42 0.014
UniRef50_Q2BEX7 Cluster: ATP synthase subunit B; n=2; Bacillus|R... 41 0.019
UniRef50_A5D0F3 Cluster: Flagellar biosynthesis/type III secreto... 41 0.019
UniRef50_Q52371 Cluster: Type III secretion ATP synthase hrcN; n... 41 0.019
UniRef50_Q8R9Z1 Cluster: Flagellar biosynthesis/type III secreto... 40 0.058
UniRef50_Q8VNS1 Cluster: EscN protein; n=11; Enterobacteriaceae|... 40 0.058
UniRef50_A3SFS3 Cluster: Flagellum-specific ATP synthase; n=2; S... 39 0.077
UniRef50_O05528 Cluster: Flagellum-specific ATP synthase; n=26; ... 39 0.077
UniRef50_A7CYE2 Cluster: Flagellar protein export ATPase FliI; n... 39 0.10
UniRef50_P26465 Cluster: Flagellum-specific ATP synthase; n=258;... 39 0.10
UniRef50_P74857 Cluster: Probable secretion system apparatus ATP... 38 0.13
UniRef50_Q7Z601 Cluster: Probable G-protein coupled receptor 142... 38 0.18
UniRef50_Q7UIJ0 Cluster: Flagellum-specific ATP synthase; n=3; P... 38 0.23
UniRef50_Q2IQ94 Cluster: Sodium-transporting two-sector ATPase; ... 38 0.23
UniRef50_Q2CGJ3 Cluster: Flagellum-specific ATP synthase; n=1; O... 37 0.41
UniRef50_Q1GNY4 Cluster: ATPase FliI/YscN; n=6; Bacteria|Rep: AT... 37 0.41
UniRef50_Q058C4 Cluster: Flagellum-specific ATP synthase; n=1; B... 37 0.41
UniRef50_A4EBH3 Cluster: Putative uncharacterized protein; n=1; ... 36 0.54
UniRef50_P55717 Cluster: Probable ATP synthase y4yI; n=27; Bacte... 36 0.72
UniRef50_Q0VLP7 Cluster: Acyl-CoA dehydrogenase, putative; n=1; ... 36 0.95
UniRef50_A6Q2N1 Cluster: Flagellar-specific ATP synthase FliI; n... 36 0.95
UniRef50_Q53153 Cluster: FliI protein; n=7; Rhodobacteraceae|Rep... 35 1.3
UniRef50_A3WGS0 Cluster: FliI, Flagellum-specific ATPase; n=2; E... 35 1.3
UniRef50_P0A1B9 Cluster: Probable ATP synthase spaL; n=32; Prote... 35 1.3
UniRef50_Q54TM7 Cluster: Leucine-rich repeat-containing protein;... 35 1.7
UniRef50_P52607 Cluster: Flagellum-specific ATP synthase; n=3; B... 35 1.7
UniRef50_Q2SEY6 Cluster: Flagellum-specific ATP synthase; n=1; H... 34 2.2
UniRef50_A0DJD2 Cluster: Chromosome undetermined scaffold_53, wh... 34 2.2
UniRef50_Q08637 Cluster: V-type sodium ATP synthase subunit B (E... 34 2.2
UniRef50_Q74G36 Cluster: Flagellum-specific ATP synthase FliI; n... 33 3.8
UniRef50_Q02C61 Cluster: ATPase, FliI/YscN family; n=2; Bacteria... 33 3.8
UniRef50_A6C8U5 Cluster: Transcriptional regulator; n=1; Plancto... 33 3.8
UniRef50_Q85X22 Cluster: ORF50f; n=1; Pinus koraiensis|Rep: ORF5... 33 3.8
UniRef50_Q6BKD0 Cluster: Similar to CA5636|IPF473 Candida albica... 33 3.8
UniRef50_Q3J9F4 Cluster: Sodium-transporting two-sector ATPase; ... 33 5.0
UniRef50_A0Z379 Cluster: ATPase FliI/YscN; n=1; marine gamma pro... 33 5.0
UniRef50_Q23Q29 Cluster: Putative uncharacterized protein; n=1; ... 33 5.0
UniRef50_Q8F319 Cluster: Flagellum-specific ATP synthase fliI; n... 33 6.7
UniRef50_A0EB18 Cluster: Chromosome undetermined scaffold_87, wh... 33 6.7
UniRef50_O83541 Cluster: V-type ATP synthase alpha chain 2; n=7;... 33 6.7
UniRef50_A1SEP6 Cluster: ATPase, FliI/YscN family; n=10; Bacteri... 32 8.8
UniRef50_A1EBU5 Cluster: SctN; n=1; Lysobacter enzymogenes|Rep: ... 32 8.8
UniRef50_A0BC74 Cluster: Chromosome undetermined scaffold_10, wh... 32 8.8
>UniRef50_P06576 Cluster: ATP synthase subunit beta, mitochondrial
precursor; n=3027; cellular organisms|Rep: ATP synthase
subunit beta, mitochondrial precursor - Homo sapiens
(Human)
Length = 529
Score = 156 bits (378), Expect = 4e-37
Identities = 82/104 (78%), Positives = 87/104 (83%), Gaps = 1/104 (0%)
Frame = -3
Query: 551 QAIYVPADDL-QILLRYHFCSLGCYH*LSRAIAELGIYPAVDPLDSTSRIMDPNIIGAEH 375
QAIYVPADDL F L LSRAIAELGIYPAVDPLDSTSRIMDPNI+G+EH
Sbjct: 358 QAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVGSEH 417
Query: 374 YNVARGVQKILQDYKSLQDIIAILGMDELSEEDKLTVARAVKFR 243
Y+VARGVQKILQDYKSLQDIIAILGMDELSEEDKLTV+RA K +
Sbjct: 418 YDVARGVQKILQDYKSLQDIIAILGMDELSEEDKLTVSRARKIQ 461
Score = 124 bits (299), Expect = 2e-27
Identities = 58/67 (86%), Positives = 62/67 (92%)
Frame = -2
Query: 252 KIQRFLSQPFQVAEVFTGHAGKLVPLEETIKGFSKILAGDYDHLPEVAFYMVGPIEEVVA 73
KIQRFLSQPFQVAEVFTGH GKLVPL+ETIKGF +ILAG+YDHLPE AFYMVGPIEE VA
Sbjct: 459 KIQRFLSQPFQVAEVFTGHMGKLVPLKETIKGFQQILAGEYDHLPEQAFYMVGPIEEAVA 518
Query: 72 KADTLAK 52
KAD LA+
Sbjct: 519 KADKLAE 525
>UniRef50_Q9C5A9 Cluster: ATP synthase subunit beta-3, mitochondrial
precursor; n=1793; root|Rep: ATP synthase subunit
beta-3, mitochondrial precursor - Arabidopsis thaliana
(Mouse-ear cress)
Length = 559
Score = 141 bits (342), Expect = 1e-32
Identities = 73/104 (70%), Positives = 83/104 (79%), Gaps = 1/104 (0%)
Frame = -3
Query: 551 QAIYVPADDL-QILLRYHFCSLGCYH*LSRAIAELGIYPAVDPLDSTSRIMDPNIIGAEH 375
QAIYVPADDL F L LSR I+ELGIYPAVDPLDSTSR++ P+I+G EH
Sbjct: 388 QAIYVPADDLTDPAPATTFAHLDATTVLSRQISELGIYPAVDPLDSTSRMLSPHILGEEH 447
Query: 374 YNVARGVQKILQDYKSLQDIIAILGMDELSEEDKLTVARAVKFR 243
YN ARGVQK+LQ+YK+LQDIIAILGMDELSE+DKLTVARA K +
Sbjct: 448 YNTARGVQKVLQNYKNLQDIIAILGMDELSEDDKLTVARARKIQ 491
Score = 89.0 bits (211), Expect = 7e-17
Identities = 43/69 (62%), Positives = 51/69 (73%)
Frame = -2
Query: 252 KIQRFLSQPFQVAEVFTGHAGKLVPLEETIKGFSKILAGDYDHLPEVAFYMVGPIEEVVA 73
KIQRFLSQPF VAE+FTG GK V L+E I F +L G YD L E +FYMVG I+EVVA
Sbjct: 489 KIQRFLSQPFHVAEIFTGAPGKYVDLKENINSFQGLLDGKYDDLSEQSFYMVGGIDEVVA 548
Query: 72 KADTLAKNA 46
KA+ +AK +
Sbjct: 549 KAEKIAKES 557
>UniRef50_O50341 Cluster: ATP synthase subunit beta; n=23; cellular
organisms|Rep: ATP synthase subunit beta -
Fervidobacterium islandicum
Length = 472
Score = 133 bits (321), Expect = 3e-30
Identities = 69/104 (66%), Positives = 79/104 (75%), Gaps = 1/104 (0%)
Frame = -3
Query: 551 QAIYVPADDL-QILLRYHFCSLGCYH*LSRAIAELGIYPAVDPLDSTSRIMDPNIIGAEH 375
QAIYVPADD+ F L LSR +A LG+YPAVDPLDSTS+I+DPNI+G EH
Sbjct: 301 QAIYVPADDITDPAPATTFTHLDATIVLSRQLAALGLYPAVDPLDSTSKILDPNIVGKEH 360
Query: 374 YNVARGVQKILQDYKSLQDIIAILGMDELSEEDKLTVARAVKFR 243
Y VARGVQ++LQ YK LQDIIAILGM+ELSEEDKL V RA K +
Sbjct: 361 YEVARGVQEVLQRYKDLQDIIAILGMEELSEEDKLIVQRARKIQ 404
Score = 88.2 bits (209), Expect = 1e-16
Identities = 43/69 (62%), Positives = 51/69 (73%)
Frame = -2
Query: 252 KIQRFLSQPFQVAEVFTGHAGKLVPLEETIKGFSKILAGDYDHLPEVAFYMVGPIEEVVA 73
KIQRFL+QP VAE F+G G VP++ETI+GF +IL G YD LPE AFYMVG I+E V
Sbjct: 402 KIQRFLTQPTHVAERFSGIPGVYVPIKETIRGFKEILEGRYDDLPEAAFYMVGTIDEAVE 461
Query: 72 KADTLAKNA 46
KA L K+A
Sbjct: 462 KAKKLMKSA 470
>UniRef50_Q92LK8 Cluster: ATP synthase subunit beta; n=32; cellular
organisms|Rep: ATP synthase subunit beta - Rhizobium
meliloti (Sinorhizobium meliloti)
Length = 504
Score = 131 bits (316), Expect = 1e-29
Identities = 70/102 (68%), Positives = 77/102 (75%), Gaps = 1/102 (0%)
Frame = -3
Query: 551 QAIYVPADDL-QILLRYHFCSLGCYH*LSRAIAELGIYPAVDPLDSTSRIMDPNIIGAEH 375
QAIYVPADDL F L LSR+IAE GIYPAVDPLDSTSR++DP I+G EH
Sbjct: 334 QAIYVPADDLTDPAPATSFAHLDATTVLSRSIAEKGIYPAVDPLDSTSRMLDPMIVGEEH 393
Query: 374 YNVARGVQKILQDYKSLQDIIAILGMDELSEEDKLTVARAVK 249
Y V+R VQ LQ YK+LQDIIAILGMDELSEEDK+ VARA K
Sbjct: 394 YEVSRKVQSTLQRYKALQDIIAILGMDELSEEDKIAVARARK 435
Score = 101 bits (242), Expect = 1e-20
Identities = 49/69 (71%), Positives = 54/69 (78%)
Frame = -2
Query: 252 KIQRFLSQPFQVAEVFTGHAGKLVPLEETIKGFSKILAGDYDHLPEVAFYMVGPIEEVVA 73
KI+RFLSQPF VAEVFTG GKLV LE+TIKGF ++ G+YDHLPE AFYMVG IEE V
Sbjct: 435 KIERFLSQPFFVAEVFTGSPGKLVALEDTIKGFKGLVNGEYDHLPEAAFYMVGSIEEAVE 494
Query: 72 KADTLAKNA 46
KA LA A
Sbjct: 495 KAKKLAAEA 503
>UniRef50_P00830 Cluster: ATP synthase subunit beta, mitochondrial
precursor; n=14; cellular organisms|Rep: ATP synthase
subunit beta, mitochondrial precursor - Saccharomyces
cerevisiae (Baker's yeast)
Length = 511
Score = 126 bits (305), Expect = 3e-28
Identities = 67/104 (64%), Positives = 77/104 (74%), Gaps = 1/104 (0%)
Frame = -3
Query: 551 QAIYVPADDL-QILLRYHFCSLGCYH*LSRAIAELGIYPAVDPLDSTSRIMDPNIIGAEH 375
QA+YVPADDL F L LSR I+ELGIYPAVDPLDS SR++D ++G EH
Sbjct: 341 QAVYVPADDLTDPAPATTFAHLDATTVLSRGISELGIYPAVDPLDSKSRLLDAAVVGQEH 400
Query: 374 YNVARGVQKILQDYKSLQDIIAILGMDELSEEDKLTVARAVKFR 243
Y+VA VQ+ LQ YKSLQDIIAILGMDELSE+DKLTV RA K +
Sbjct: 401 YDVASKVQETLQTYKSLQDIIAILGMDELSEQDKLTVERARKIQ 444
Score = 95.1 bits (226), Expect = 1e-18
Identities = 46/69 (66%), Positives = 54/69 (78%)
Frame = -2
Query: 252 KIQRFLSQPFQVAEVFTGHAGKLVPLEETIKGFSKILAGDYDHLPEVAFYMVGPIEEVVA 73
KIQRFLSQPF VAEVFTG GKLV L++T+ F +L G YD++PE AFYMVG IE+VVA
Sbjct: 442 KIQRFLSQPFAVAEVFTGIPGKLVRLKDTVASFKAVLEGKYDNIPEHAFYMVGGIEDVVA 501
Query: 72 KADTLAKNA 46
KA+ LA A
Sbjct: 502 KAEKLAAEA 510
>UniRef50_Q5FRC5 Cluster: ATP synthase subunit beta; n=266; cellular
organisms|Rep: ATP synthase subunit beta - Gluconobacter
oxydans (Gluconobacter suboxydans)
Length = 487
Score = 126 bits (304), Expect = 4e-28
Identities = 66/100 (66%), Positives = 74/100 (74%), Gaps = 1/100 (1%)
Frame = -3
Query: 551 QAIYVPADDL-QILLRYHFCSLGCYH*LSRAIAELGIYPAVDPLDSTSRIMDPNIIGAEH 375
QA+YVPADDL F L L+R+IAE+GIYPAVDPLDSTSR +DP I+G EH
Sbjct: 318 QAVYVPADDLTDPAPAATFAHLDATTVLNRSIAEMGIYPAVDPLDSTSRSLDPKIVGEEH 377
Query: 374 YNVARGVQKILQDYKSLQDIIAILGMDELSEEDKLTVARA 255
Y VAR VQ+ LQ YK LQDIIAILGMDELSE+DK V RA
Sbjct: 378 YQVARQVQQTLQTYKGLQDIIAILGMDELSEDDKKIVGRA 417
Score = 101 bits (243), Expect = 1e-20
Identities = 46/73 (63%), Positives = 57/73 (78%)
Frame = -2
Query: 264 GTCSKIQRFLSQPFQVAEVFTGHAGKLVPLEETIKGFSKILAGDYDHLPEVAFYMVGPIE 85
G +IQRFLSQPF VAEVFTG GKLV LE+TI+ F ++AG+YDHLPE AFYMVG I+
Sbjct: 415 GRARRIQRFLSQPFHVAEVFTGAPGKLVSLEDTIRSFKAVVAGEYDHLPEGAFYMVGDID 474
Query: 84 EVVAKADTLAKNA 46
E +AKA+ + + A
Sbjct: 475 EAIAKAEKMKQEA 487
>UniRef50_Q5NQY9 Cluster: ATP synthase subunit beta; n=169; cellular
organisms|Rep: ATP synthase subunit beta - Zymomonas
mobilis
Length = 484
Score = 124 bits (299), Expect = 2e-27
Identities = 65/100 (65%), Positives = 75/100 (75%), Gaps = 1/100 (1%)
Frame = -3
Query: 551 QAIYVPADDL-QILLRYHFCSLGCYH*LSRAIAELGIYPAVDPLDSTSRIMDPNIIGAEH 375
QAIYVPADDL F L LSRAI+E+GIYPAVDPLDS+SR ++P I+G EH
Sbjct: 314 QAIYVPADDLTDPAPAASFAHLDATTVLSRAISEMGIYPAVDPLDSSSRNLEPRIVGDEH 373
Query: 374 YNVARGVQKILQDYKSLQDIIAILGMDELSEEDKLTVARA 255
Y AR VQ+ILQ YK+LQDIIAILGMDELSE+D+ V RA
Sbjct: 374 YQTARDVQEILQRYKNLQDIIAILGMDELSEDDRKVVGRA 413
Score = 94.3 bits (224), Expect = 2e-18
Identities = 44/73 (60%), Positives = 54/73 (73%)
Frame = -2
Query: 264 GTCSKIQRFLSQPFQVAEVFTGHAGKLVPLEETIKGFSKILAGDYDHLPEVAFYMVGPIE 85
G +IQRFLSQPF VAEVFTG GK V +E+T++ F +I+ G YD LPE AFYMVG I+
Sbjct: 411 GRARRIQRFLSQPFHVAEVFTGMPGKFVQVEDTVRSFREIIDGKYDDLPENAFYMVGSID 470
Query: 84 EVVAKADTLAKNA 46
E VAKA+ +A A
Sbjct: 471 EAVAKAEKMAAEA 483
>UniRef50_P13356 Cluster: ATP synthase subunit beta; n=5;
Bacteroides|Rep: ATP synthase subunit beta - Bacteroides
fragilis
Length = 505
Score = 117 bits (282), Expect = 2e-25
Identities = 62/100 (62%), Positives = 75/100 (75%), Gaps = 1/100 (1%)
Frame = -3
Query: 551 QAIYVPADDL-QILLRYHFCSLGCYH*LSRAIAELGIYPAVDPLDSTSRIMDPNIIGAEH 375
QA+YVPADDL F L LSR I ELGIYPAVDPL+STSRI+DP+I+G EH
Sbjct: 334 QAVYVPADDLTDPAPATTFTHLDATTVLSRKITELGIYPAVDPLESTSRILDPHIVGQEH 393
Query: 374 YNVARGVQKILQDYKSLQDIIAILGMDELSEEDKLTVARA 255
Y+VA+ V++ILQ K LQDII+ILGM+ELS+ D+L V RA
Sbjct: 394 YDVAQRVKQILQRNKELQDIISILGMEELSDADRLVVNRA 433
Score = 81.8 bits (193), Expect = 1e-14
Identities = 40/71 (56%), Positives = 49/71 (69%)
Frame = -2
Query: 252 KIQRFLSQPFQVAEVFTGHAGKLVPLEETIKGFSKILAGDYDHLPEVAFYMVGPIEEVVA 73
++QRFLSQPF VAE FTG G +V +E+TIKGF IL G+ D+LPE AF VG IEE +
Sbjct: 435 RVQRFLSQPFTVAEQFTGVPGAMVAIEDTIKGFKMILDGEVDYLPEPAFLNVGTIEEAIE 494
Query: 72 KADTLAKNA*K 40
K L + A K
Sbjct: 495 KGKKLLEQANK 505
>UniRef50_A1ZPD5 Cluster: ATP synthase F1, beta subunit; n=4;
Bacteroidetes|Rep: ATP synthase F1, beta subunit -
Microscilla marina ATCC 23134
Length = 505
Score = 112 bits (270), Expect = 5e-24
Identities = 59/100 (59%), Positives = 72/100 (72%), Gaps = 1/100 (1%)
Frame = -3
Query: 551 QAIYVPADDL-QILLRYHFCSLGCYH*LSRAIAELGIYPAVDPLDSTSRIMDPNIIGAEH 375
QAIYVPADDL F L LSR +A LGIYPAVDPLDSTSRI+ +I+G EH
Sbjct: 331 QAIYVPADDLTDPAPATTFAHLDATTVLSRKLASLGIYPAVDPLDSTSRILTADILGEEH 390
Query: 374 YNVARGVQKILQDYKSLQDIIAILGMDELSEEDKLTVARA 255
YN+A+ V++ LQ Y LQDIIAILG+DELS++D+ V +A
Sbjct: 391 YNIAQRVKETLQRYNELQDIIAILGLDELSDDDRKVVNKA 430
Score = 66.5 bits (155), Expect = 4e-10
Identities = 35/70 (50%), Positives = 44/70 (62%), Gaps = 1/70 (1%)
Frame = -2
Query: 252 KIQRFLSQPFQVAEVFTGHAGKLVPLEETIKGFSKILAGD-YDHLPEVAFYMVGPIEEVV 76
+IQRFLSQPF VAE FTG G LV +++TIKGF +L D PE AF + G IEE +
Sbjct: 432 RIQRFLSQPFHVAEQFTGLTGALVDIKDTIKGFKMLLDDDSLLKYPEPAFNLKGTIEEAI 491
Query: 75 AKADTLAKNA 46
+ + K A
Sbjct: 492 EAGEQMLKEA 501
>UniRef50_Q9MTQ2 Cluster: ATP synthase subunit beta; n=2;
Amphidinium|Rep: ATP synthase subunit beta - Amphidinium
operculatum (Dinoflagellate)
Length = 548
Score = 101 bits (242), Expect = 1e-20
Identities = 53/102 (51%), Positives = 67/102 (65%), Gaps = 1/102 (0%)
Frame = -3
Query: 551 QAIYVPADDLQILLRYH-FCSLGCYH*LSRAIAELGIYPAVDPLDSTSRIMDPNIIGAEH 375
QA+YVPADD+ F L LSR +A GIYPAVDPL STS+ + + +G H
Sbjct: 391 QAVYVPADDITDPAPVAIFTHLDAITVLSRGLAAKGIYPAVDPLASTSKALTASFVGERH 450
Query: 374 YNVARGVQKILQDYKSLQDIIAILGMDELSEEDKLTVARAVK 249
YNVA+ + + L YK LQD+IAILG+DELSE D+L+V R K
Sbjct: 451 YNVAQSIIQCLNRYKELQDLIAILGLDELSESDRLSVLRGRK 492
Score = 62.1 bits (144), Expect = 1e-08
Identities = 30/57 (52%), Positives = 37/57 (64%)
Frame = -2
Query: 252 KIQRFLSQPFQVAEVFTGHAGKLVPLEETIKGFSKILAGDYDHLPEVAFYMVGPIEE 82
KI+RFLSQPF VAEVF+ GK V +EE + GF IL G YD E FY+ G + +
Sbjct: 492 KIERFLSQPFFVAEVFSRTPGKYVKVEEALDGFDGILTGRYDDRAEADFYLQGAMSD 548
>UniRef50_Q2I6N8 Cluster: ATP synthase beta chain; n=2; Gonyaulax
polyedra|Rep: ATP synthase beta chain - Gonyaulax
polyedra (Dinoflagellate)
Length = 253
Score = 93.5 bits (222), Expect = 3e-18
Identities = 42/75 (56%), Positives = 60/75 (80%)
Frame = -3
Query: 473 LSRAIAELGIYPAVDPLDSTSRIMDPNIIGAEHYNVARGVQKILQDYKSLQDIIAILGMD 294
LSR +A GIYPAVDP +STS+++DP + EH+ VA+ V++I+Q YK LQD+IAILG++
Sbjct: 78 LSRVLAAKGIYPAVDPFNSTSKLLDPYYVEQEHFCVAQDVKQIMQRYKELQDVIAILGLE 137
Query: 293 ELSEEDKLTVARAVK 249
ELS++D++ V RA K
Sbjct: 138 ELSDQDRIIVDRARK 152
Score = 66.1 bits (154), Expect = 6e-10
Identities = 31/58 (53%), Positives = 41/58 (70%)
Frame = -2
Query: 252 KIQRFLSQPFQVAEVFTGHAGKLVPLEETIKGFSKILAGDYDHLPEVAFYMVGPIEEV 79
K++RFLSQPF VAE+FT G+ V L TI GFSKI+ GD D E +FY+ G I+++
Sbjct: 152 KVERFLSQPFFVAEIFTRIQGRYVSLGNTIFGFSKIIKGDLDTFMEGSFYLKGAIDDI 209
>UniRef50_Q4IW70 Cluster: ATP synthase F1, beta subunit; n=1;
Azotobacter vinelandii AvOP|Rep: ATP synthase F1, beta
subunit - Azotobacter vinelandii AvOP
Length = 473
Score = 92.3 bits (219), Expect = 8e-18
Identities = 47/103 (45%), Positives = 71/103 (68%), Gaps = 4/103 (3%)
Frame = -3
Query: 551 QAIYVPADDLQ----ILLRYHFCSLGCYH*LSRAIAELGIYPAVDPLDSTSRIMDPNIIG 384
+A+YVPADD L H S+ LSRA+A G+YPAVDP+ S+S ++DP ++G
Sbjct: 301 EAVYVPADDFTDPAVTALAAHVDSMVV---LSRAMAAQGMYPAVDPIASSSLLLDPLVVG 357
Query: 383 AEHYNVARGVQKILQDYKSLQDIIAILGMDELSEEDKLTVARA 255
AEH +A ++I++ Y+SLQD+I++LG++EL+ ED+ V RA
Sbjct: 358 AEHVAIATEARRIIEHYRSLQDVISLLGIEELAVEDRRIVGRA 400
Score = 64.9 bits (151), Expect = 1e-09
Identities = 31/67 (46%), Positives = 42/67 (62%)
Frame = -2
Query: 264 GTCSKIQRFLSQPFQVAEVFTGHAGKLVPLEETIKGFSKILAGDYDHLPEVAFYMVGPIE 85
G ++QRFL+QPF V E FTG G+ V L +T+ G ILAG+ D E + YMVG +E
Sbjct: 398 GRARRLQRFLTQPFAVTEAFTGMPGRSVALADTLAGCRAILAGECDDWQERSLYMVGTLE 457
Query: 84 EVVAKAD 64
E A+ +
Sbjct: 458 EARAREE 464
>UniRef50_A5IFJ3 Cluster: ATP synthase F1, beta chain; n=3;
Legionella pneumophila|Rep: ATP synthase F1, beta chain
- Legionella pneumophila (strain Corby)
Length = 474
Score = 87.4 bits (207), Expect = 2e-16
Identities = 46/104 (44%), Positives = 69/104 (66%), Gaps = 1/104 (0%)
Frame = -3
Query: 551 QAIYVPADDLQI-LLRYHFCSLGCYH*LSRAIAELGIYPAVDPLDSTSRIMDPNIIGAEH 375
QA+YVPADD+ + L LSRA A GIYPAVDPL S S+ MD ++G H
Sbjct: 315 QAVYVPADDMSDPAVTGIITHLDSIIVLSRAQAGKGIYPAVDPLASKSQFMDKILLGERH 374
Query: 374 YNVARGVQKILQDYKSLQDIIAILGMDELSEEDKLTVARAVKFR 243
Y++A+ V++ L+ Y+ L+D+I+++G++ELS +D+ V RA K +
Sbjct: 375 YSIAQAVREHLERYQELEDMISMMGIEELSPKDRAIVLRARKLQ 418
Score = 56.8 bits (131), Expect = 4e-07
Identities = 27/57 (47%), Positives = 35/57 (61%)
Frame = -2
Query: 252 KIQRFLSQPFQVAEVFTGHAGKLVPLEETIKGFSKILAGDYDHLPEVAFYMVGPIEE 82
K+QR+LSQPF V ++ TG GK V LE T+ L GDYD E A YM G +++
Sbjct: 416 KLQRYLSQPFHVTKLQTGMEGKSVSLEHTLTDCESFLRGDYDEFSEEACYMRGAMDK 472
>UniRef50_Q62EB7 Cluster: ATP synthase F1, beta subunit; n=27;
Bacteria|Rep: ATP synthase F1, beta subunit -
Burkholderia mallei (Pseudomonas mallei)
Length = 534
Score = 87.0 bits (206), Expect = 3e-16
Identities = 44/103 (42%), Positives = 68/103 (66%), Gaps = 4/103 (3%)
Frame = -3
Query: 551 QAIYVPADDLQ----ILLRYHFCSLGCYH*LSRAIAELGIYPAVDPLDSTSRIMDPNIIG 384
+A+YVPADD + H S+ LSRA+A G+YPA+DP+ S+S ++DP ++G
Sbjct: 331 EAVYVPADDFTDPAVTAIAAHVDSMVV---LSRAMAAEGMYPAIDPVASSSILLDPLVVG 387
Query: 383 AEHYNVARGVQKILQDYKSLQDIIAILGMDELSEEDKLTVARA 255
H VA V+++++ Y+ LQD+IA+LG+DEL +D+ V RA
Sbjct: 388 EAHVEVAIEVRRVIEHYRELQDVIALLGIDELGADDRRLVGRA 430
Score = 62.5 bits (145), Expect = 7e-09
Identities = 30/65 (46%), Positives = 39/65 (60%)
Frame = -2
Query: 264 GTCSKIQRFLSQPFQVAEVFTGHAGKLVPLEETIKGFSKILAGDYDHLPEVAFYMVGPIE 85
G ++QRFL+QPF V E FTG AG V + +TI G IL GD D E + YMVG ++
Sbjct: 428 GRARRLQRFLTQPFAVTEAFTGQAGASVEIADTIAGCRAILRGDCDDWRESSLYMVGTLD 487
Query: 84 EVVAK 70
+ K
Sbjct: 488 DARRK 492
>UniRef50_Q98QX4 Cluster: ATP SYNTHASE BETA CHAIN; n=1; Mycoplasma
pulmonis|Rep: ATP SYNTHASE BETA CHAIN - Mycoplasma
pulmonis
Length = 698
Score = 77.4 bits (182), Expect = 2e-13
Identities = 43/97 (44%), Positives = 56/97 (57%), Gaps = 1/97 (1%)
Frame = -3
Query: 551 QAIYVPADDLQILLRYH-FCSLGCYH*LSRAIAELGIYPAVDPLDSTSRIMDPNIIGAEH 375
QA+Y+PADD F LSR +A G+YPAVDPL S+S+++ H
Sbjct: 510 QAMYIPADDFTDPAAVAAFAHFDATIILSRQLAAEGLYPAVDPLVSSSKLLSTKFTSTRH 569
Query: 374 YNVARGVQKILQDYKSLQDIIAILGMDELSEEDKLTV 264
N+A+ IL+ KSL+DII ILG D LSE D+ TV
Sbjct: 570 INIAKETIAILEKSKSLEDIINILGFDALSEADRKTV 606
Score = 66.1 bits (154), Expect = 6e-10
Identities = 28/60 (46%), Positives = 41/60 (68%)
Frame = -2
Query: 249 IQRFLSQPFQVAEVFTGHAGKLVPLEETIKGFSKILAGDYDHLPEVAFYMVGPIEEVVAK 70
I++FL+QPF V+E FTG G V L + ++G +IL G+++H+PE F VG IEE + K
Sbjct: 612 IRKFLTQPFVVSEKFTGQKGVFVTLNDALRGMERILTGEFNHIPETYFAYVGTIEEALEK 671
>UniRef50_A5AGS0 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 316
Score = 76.6 bits (180), Expect = 4e-13
Identities = 36/50 (72%), Positives = 41/50 (82%)
Frame = -3
Query: 398 PNIIGAEHYNVARGVQKILQDYKSLQDIIAILGMDELSEEDKLTVARAVK 249
P+I+G EHYN A GVQK+LQ+YK+LQD IA L MDELSE DKL VARA K
Sbjct: 137 PHILGEEHYNTAYGVQKVLQNYKNLQDCIATLRMDELSENDKLIVARACK 186
>UniRef50_Q6KIC3 Cluster: ATP synthase beta chain; n=1; Mycoplasma
mobile|Rep: ATP synthase beta chain - Mycoplasma mobile
Length = 784
Score = 75.4 bits (177), Expect = 1e-12
Identities = 42/100 (42%), Positives = 60/100 (60%), Gaps = 4/100 (4%)
Frame = -3
Query: 551 QAIYVPADDLQ----ILLRYHFCSLGCYH*LSRAIAELGIYPAVDPLDSTSRIMDPNIIG 384
QA+Y+PADD + HF S LSR +A G+YPA+DPL+S S+++
Sbjct: 598 QAMYIPADDFTDPAAVAAFAHFDSTII---LSRQLAAEGVYPAIDPLESNSKMLSIKYTS 654
Query: 383 AEHYNVARGVQKILQDYKSLQDIIAILGMDELSEEDKLTV 264
EH ++A+ + L+ K+L+DII ILG D LSE+DK V
Sbjct: 655 REHLDIAKKTVQTLEKTKTLEDIINILGFDALSEDDKKVV 694
Score = 64.1 bits (149), Expect = 2e-09
Identities = 30/67 (44%), Positives = 45/67 (67%)
Frame = -2
Query: 252 KIQRFLSQPFQVAEVFTGHAGKLVPLEETIKGFSKILAGDYDHLPEVAFYMVGPIEEVVA 73
+++ FL+QPF VAE F+G GK V L++++KG IL GD +H+P F VG +EE++
Sbjct: 699 RLKWFLTQPFVVAEKFSGVPGKFVRLKDSLKGIKTILDGDLNHIPVSYFSFVGVVEEIIE 758
Query: 72 KADTLAK 52
K + AK
Sbjct: 759 KFNLDAK 765
>UniRef50_Q98PM3 Cluster: ATP SYNTHASE BETA CHAIN; n=9;
Mycoplasmataceae|Rep: ATP SYNTHASE BETA CHAIN -
Mycoplasma pulmonis
Length = 468
Score = 73.3 bits (172), Expect = 4e-12
Identities = 41/104 (39%), Positives = 58/104 (55%), Gaps = 1/104 (0%)
Frame = -3
Query: 551 QAIYVPADDLQILLRYH-FCSLGCYH*LSRAIAELGIYPAVDPLDSTSRIMDPNIIGAEH 375
+ +++P DDL F L LSR A IYPA DPL S+S ++ IIG H
Sbjct: 302 ETVFLPMDDLTDPSAVSIFSHLDSSMVLSRDQAAKNIYPAFDPLASSSSSVNEKIIGTRH 361
Query: 374 YNVARGVQKILQDYKSLQDIIAILGMDELSEEDKLTVARAVKFR 243
+ + ILQ Y+ L+DII+ILG DEL E+ K+ V +A + +
Sbjct: 362 FQAILETKNILQKYQELEDIISILGFDELEEDSKIIVKKAFQLQ 405
Score = 40.3 bits (90), Expect = 0.033
Identities = 24/54 (44%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Frame = -2
Query: 252 KIQRFLSQPFQVAEVFTGHAGKLVPLEETIKGFSKILAGDY-DHLPEVAFYMVG 94
++Q F +Q F AE FT G VPL ETI+ +IL G Y PE+ F VG
Sbjct: 403 QLQNFFTQRFFTAENFTKEKGVYVPLNETIESVIRILEGKYLKQSPEI-FSFVG 455
>UniRef50_Q4PJ51 Cluster: Predicted F0F1-type ATP synthase beta
subunit; n=1; uncultured bacterium eBACred22E04|Rep:
Predicted F0F1-type ATP synthase beta subunit -
uncultured bacterium eBACred22E04
Length = 198
Score = 73.3 bits (172), Expect = 4e-12
Identities = 39/77 (50%), Positives = 49/77 (63%)
Frame = -3
Query: 473 LSRAIAELGIYPAVDPLDSTSRIMDPNIIGAEHYNVARGVQKILQDYKSLQDIIAILGMD 294
LSR A LGI P+VD LDS+S++++P IIG EHY+ R Q +LQ YK GMD
Sbjct: 90 LSRNNAGLGISPSVDTLDSSSQLLEPLIIGQEHYDTTRAQQGVLQKYKEYYIYSRKSGMD 149
Query: 293 ELSEEDKLTVARAVKFR 243
ELSE+DK RA K +
Sbjct: 150 ELSEDDKRASNRARKIQ 166
Score = 39.9 bits (89), Expect = 0.044
Identities = 19/34 (55%), Positives = 22/34 (64%)
Frame = -2
Query: 267 SGTCSKIQRFLSQPFQVAEVFTGHAGKLVPLEET 166
S KIQR+LSQ F VAE TG GK V L++T
Sbjct: 159 SNRARKIQRYLSQTFYVAETITGRPGKYVSLKDT 192
>UniRef50_Q98QB6 Cluster: ATP synthase subunit beta 2; n=5;
Mycoplasma|Rep: ATP synthase subunit beta 2 - Mycoplasma
pulmonis
Length = 468
Score = 68.9 bits (161), Expect = 8e-11
Identities = 40/111 (36%), Positives = 62/111 (55%), Gaps = 2/111 (1%)
Frame = -3
Query: 551 QAIYVPADDLQILLRYHFCS-LGCYH*LSRAIAELGIYPAVDPLDSTSRIMDPNIIGAEH 375
Q +++P DDL + L LSR I G++PA+DPL S S ++ I+G H
Sbjct: 294 QTVFLPMDDLNDPASVAILNHLDSSLVLSREIFAEGLFPAIDPLLSNSSLLQEKIVGKRH 353
Query: 374 YNVARGVQKILQDYKSLQDIIAILGMDELSEEDKLTVARAVKFRG-SSHNL 225
+ + V+KIL YK L+++I ILG+ EL ++L V +A + + S NL
Sbjct: 354 ILLVKRVKKILHKYKQLEEMIMILGVQELEPNNRLIVKKAQQLKNYFSQNL 404
>UniRef50_A0HLA3 Cluster: Putative uncharacterized protein; n=1;
Comamonas testosteroni KF-1|Rep: Putative
uncharacterized protein - Comamonas testosteroni KF-1
Length = 534
Score = 66.1 bits (154), Expect = 6e-10
Identities = 37/97 (38%), Positives = 54/97 (55%), Gaps = 1/97 (1%)
Frame = +3
Query: 264 HCQLVFFRQLVHTQNSNNVLQGFVVLKNFLNSTCNIVVLSSNNIGVHDTGS*VKRIHSWV 443
H QLVF QLVHTQN ++V Q V L+ L+ ++VVL +N++G+ T V+R+H V
Sbjct: 111 HDQLVFGSQLVHTQNRDDVAQFLVALQRTLHLASHLVVLFANHLGIQLTAGGVQRVHGGV 170
Query: 444 DTQFSNXXXXXXXXXXXXXXXXXQDL-QVISWYINSL 551
DTQ S+ + + QVI W++N L
Sbjct: 171 DTQRSDVTGQHHGGIQVSKGRGWRGVGQVIGWHVNGL 207
>UniRef50_A3TUV5 Cluster: Putative uncharacterized protein; n=3;
Alphaproteobacteria|Rep: Putative uncharacterized
protein - Oceanicola batsensis HTCC2597
Length = 620
Score = 56.8 bits (131), Expect = 4e-07
Identities = 27/63 (42%), Positives = 43/63 (68%)
Frame = +3
Query: 264 HCQLVFFRQLVHTQNSNNVLQGFVVLKNFLNSTCNIVVLSSNNIGVHDTGS*VKRIHSWV 443
H QLV FRQ VH ++ ++VLQ V LK+ L+ T ++VV ++++ VH+T V+R+H V
Sbjct: 82 HGQLVLFRQFVHPEDRDDVLQRLVALKDTLHVTGHLVVFLADDLRVHETRGRVERVHGRV 141
Query: 444 DTQ 452
D +
Sbjct: 142 DAK 144
>UniRef50_A0U258 Cluster: Putative uncharacterized protein; n=16;
Proteobacteria|Rep: Putative uncharacterized protein -
Burkholderia cenocepacia MC0-3
Length = 1630
Score = 52.8 bits (121), Expect = 6e-06
Identities = 30/68 (44%), Positives = 42/68 (61%)
Frame = +3
Query: 258 TCHCQLVFFRQLVHTQNSNNVLQGFVVLKNFLNSTCNIVVLSSNNIGVHDTGS*VKRIHS 437
TC QLVF RQ VH QN ++V Q V L+ LN+T + VVL ++++ V V+R+
Sbjct: 275 TCDRQLVFRRQFVHAQNRDDVAQFLVALQRLLNATGDRVVLFTDHVRVDLARRRVERVDR 334
Query: 438 WVDTQFSN 461
VDTQ S+
Sbjct: 335 RVDTQRSD 342
Score = 37.9 bits (84), Expect = 0.18
Identities = 20/57 (35%), Positives = 35/57 (61%)
Frame = +1
Query: 85 LNRSNHVECYFWQMIIVPC*NFGESFDSFLKWY*FTRMSSEHLSYLERL*EEPLNFT 255
++R++HVE F Q++ + + E+ D FL+ + R + EH S +ERL +E L+ T
Sbjct: 217 VDRADHVERLFRQVVALAVDDHLEATDRFLQRHVLARRAREHFSDVERLRQETLDLT 273
>UniRef50_Q67K17 Cluster: Flagellar-specific ATP synthase; n=1;
Symbiobacterium thermophilum|Rep: Flagellar-specific ATP
synthase - Symbiobacterium thermophilum
Length = 436
Score = 50.8 bits (116), Expect = 2e-05
Identities = 24/56 (42%), Positives = 36/56 (64%)
Frame = -3
Query: 473 LSRAIAELGIYPAVDPLDSTSRIMDPNIIGAEHYNVARGVQKILQDYKSLQDIIAI 306
LSR +A G YPA+DPL S SR+M P++ EH A+ ++ +L Y+ +D+I I
Sbjct: 332 LSRKLANAGHYPAIDPLQSVSRVM-PDVTTPEHRKQAQRLRALLSAYQEAEDLIQI 386
>UniRef50_A4M4Z6 Cluster: Putative uncharacterized protein; n=1;
Geobacter bemidjiensis Bem|Rep: Putative uncharacterized
protein - Geobacter bemidjiensis Bem
Length = 458
Score = 47.2 bits (107), Expect = 3e-04
Identities = 23/64 (35%), Positives = 40/64 (62%)
Frame = +3
Query: 270 QLVFFRQLVHTQNSNNVLQGFVVLKNFLNSTCNIVVLSSNNIGVHDTGS*VKRIHSWVDT 449
Q V +LVH +N ++VL+ V+L++ LN T + VVL ++ + + D G V+R+H VD
Sbjct: 48 QFVLLGELVHAENRDDVLEILVLLQHVLNLTRDGVVLVADYLRIEDPGGGVERVHCRVDA 107
Query: 450 QFSN 461
+ +
Sbjct: 108 ELGD 111
>UniRef50_Q6D5F7 Cluster: Type III secretion protein; n=10;
Enterobacteriaceae|Rep: Type III secretion protein -
Erwinia carotovora subsp. atroseptica (Pectobacterium
atrosepticum)
Length = 456
Score = 46.8 bits (106), Expect = 4e-04
Identities = 26/68 (38%), Positives = 42/68 (61%), Gaps = 4/68 (5%)
Frame = -3
Query: 473 LSRAIAELGIYPAVDPLDSTSRIMDPNIIGAEHYNVARGVQKILQDYKSLQDIIAI---- 306
L+R +AE G YPA+D L S SR M N++ +H A GV++++ YK ++ +I +
Sbjct: 352 LARRLAEQGHYPAIDVLASLSRTMS-NVVDTDHTRNAGGVRRLMAAYKQVEMLIRLGEYQ 410
Query: 305 LGMDELSE 282
G DEL++
Sbjct: 411 PGHDELTD 418
>UniRef50_O67531 Cluster: Flagellum-specific ATP synthase; n=2;
Aquifex aeolicus|Rep: Flagellum-specific ATP synthase -
Aquifex aeolicus
Length = 443
Score = 45.6 bits (103), Expect = 9e-04
Identities = 20/56 (35%), Positives = 37/56 (66%)
Frame = -3
Query: 473 LSRAIAELGIYPAVDPLDSTSRIMDPNIIGAEHYNVARGVQKILQDYKSLQDIIAI 306
LSR A G++PAVDP+ S SR+M P ++ EH+ A +++L ++ +++++ I
Sbjct: 339 LSRKRAVRGLFPAVDPVRSLSRLM-PKLVSEEHFMKANFFKEVLSKFEDVEELVRI 393
>UniRef50_Q8TUT0 Cluster: V-type ATP synthase beta chain (EC 3.6.3.14)
(V-type ATPase subunit B) [Contains: Mka atpB intein];
n=8; cellular organisms|Rep: V-type ATP synthase beta
chain (EC 3.6.3.14) (V-type ATPase subunit B) [Contains:
Mka atpB intein] - Methanopyrus kandleri
Length = 990
Score = 45.2 bits (102), Expect = 0.001
Identities = 25/80 (31%), Positives = 45/80 (56%), Gaps = 4/80 (5%)
Frame = -3
Query: 473 LSRAIAELGIYPAVDPLDSTSRIMDPNI----IGAEHYNVARGVQKILQDYKSLQDIIAI 306
LSR + GIYP +D L S SR+MD I +H +++ + + + L+D++A+
Sbjct: 853 LSRDLHRRGIYPPIDVLPSLSRLMDEGIGKGKTREDHPDLSNQLYAAYAEGRDLRDLVAV 912
Query: 305 LGMDELSEEDKLTVARAVKF 246
+G + L+E D+ + A +F
Sbjct: 913 VGEEALTERDRKFLKFADEF 932
>UniRef50_Q81SH1 Cluster: Flagellum-specific ATP synthase, putative;
n=20; Bacillales|Rep: Flagellum-specific ATP synthase,
putative - Bacillus anthracis
Length = 434
Score = 44.8 bits (101), Expect = 0.002
Identities = 22/48 (45%), Positives = 31/48 (64%)
Frame = -3
Query: 473 LSRAIAELGIYPAVDPLDSTSRIMDPNIIGAEHYNVARGVQKILQDYK 330
L R +A L YPA+ LDS SRIM+ I+ + H+ +A ++KIL YK
Sbjct: 333 LKRELATLSHYPAISVLDSVSRIME-EIVSSNHWQLANEMRKILSVYK 379
>UniRef50_A7DHD2 Cluster: Putative uncharacterized protein; n=1;
Methylobacterium extorquens PA1|Rep: Putative
uncharacterized protein - Methylobacterium extorquens
PA1
Length = 945
Score = 44.8 bits (101), Expect = 0.002
Identities = 25/66 (37%), Positives = 37/66 (56%)
Frame = +3
Query: 264 HCQLVFFRQLVHTQNSNNVLQGFVVLKNFLNSTCNIVVLSSNNIGVHDTGS*VKRIHSWV 443
H QLV FRQLVH ++ ++VL+ V L+ L+ T + V+L + + G V+RI V
Sbjct: 166 HRQLVLFRQLVHPEDGDDVLKRLVALQRLLDLTGDFVMLFAEDGGRQHARGRVERIDGRV 225
Query: 444 DTQFSN 461
D N
Sbjct: 226 DALLGN 231
>UniRef50_P23445 Cluster: Flagellum-specific ATP synthase; n=18;
Bacteria|Rep: Flagellum-specific ATP synthase - Bacillus
subtilis
Length = 440
Score = 42.3 bits (95), Expect = 0.008
Identities = 22/56 (39%), Positives = 35/56 (62%)
Frame = -3
Query: 473 LSRAIAELGIYPAVDPLDSTSRIMDPNIIGAEHYNVARGVQKILQDYKSLQDIIAI 306
L RA+A G +PAV+ L S SR+M NI +H + A +++L Y++ +D+I I
Sbjct: 336 LDRALANKGQFPAVNVLKSISRVMS-NISTKQHLDAANKFRELLSTYQNSEDLINI 390
>UniRef50_A1T0I0 Cluster: ATPase, FliI/YscN family protein; n=1;
Psychromonas ingrahamii 37|Rep: ATPase, FliI/YscN family
protein - Psychromonas ingrahamii (strain 37)
Length = 436
Score = 41.9 bits (94), Expect = 0.011
Identities = 21/61 (34%), Positives = 35/61 (57%)
Frame = -3
Query: 473 LSRAIAELGIYPAVDPLDSTSRIMDPNIIGAEHYNVARGVQKILQDYKSLQDIIAILGMD 294
LS+ +A+ G +PAVD S SR MD ++ H +AR +++ Y +D+IA+ G
Sbjct: 333 LSKELAQRGQFPAVDIEKSISRCMDA-VVSEPHLQIARQCKRLYSMYNKAKDLIALGGYQ 391
Query: 293 E 291
+
Sbjct: 392 Q 392
>UniRef50_O83417 Cluster: Flagellum-specific ATP synthase; n=42;
Bacteria|Rep: Flagellum-specific ATP synthase -
Treponema pallidum
Length = 447
Score = 41.5 bits (93), Expect = 0.014
Identities = 20/56 (35%), Positives = 34/56 (60%)
Frame = -3
Query: 473 LSRAIAELGIYPAVDPLDSTSRIMDPNIIGAEHYNVARGVQKILQDYKSLQDIIAI 306
LSRA+A+ YPA+D L S SR+ ++GA+ R V++ L Y ++D++ +
Sbjct: 336 LSRALAQRNHYPAIDVLQSVSRLAH-RVLGADMKEAVRIVRRALAVYAEVEDLVRV 390
>UniRef50_Q2BEX7 Cluster: ATP synthase subunit B; n=2; Bacillus|Rep:
ATP synthase subunit B - Bacillus sp. NRRL B-14911
Length = 371
Score = 41.1 bits (92), Expect = 0.019
Identities = 19/68 (27%), Positives = 36/68 (52%)
Frame = -3
Query: 461 IAELGIYPAVDPLDSTSRIMDPNIIGAEHYNVARGVQKILQDYKSLQDIIAILGMDELSE 282
+A +YPAV+P+ S S +++ + H + + QK+L+ YK L+ ++ G+ L
Sbjct: 239 LAARHLYPAVNPIYSASSVLEGAYLDQAHLTIQQKAQKLLRRYKELKALVQAGGIKRLPS 298
Query: 281 EDKLTVAR 258
+ L R
Sbjct: 299 SETLGYQR 306
Score = 40.7 bits (91), Expect = 0.025
Identities = 18/41 (43%), Positives = 25/41 (60%)
Frame = -2
Query: 249 IQRFLSQPFQVAEVFTGHAGKLVPLEETIKGFSKILAGDYD 127
++ +L+QPF AE FTG G+ V L+E + KIL G D
Sbjct: 310 LEAYLTQPFYTAEAFTGQKGQSVSLQENLSDVRKILDGGAD 350
>UniRef50_A5D0F3 Cluster: Flagellar biosynthesis/type III secretory
pathway ATPase; n=4; Bacteria|Rep: Flagellar
biosynthesis/type III secretory pathway ATPase -
Pelotomaculum thermopropionicum SI
Length = 446
Score = 41.1 bits (92), Expect = 0.019
Identities = 23/56 (41%), Positives = 35/56 (62%)
Frame = -3
Query: 473 LSRAIAELGIYPAVDPLDSTSRIMDPNIIGAEHYNVARGVQKILQDYKSLQDIIAI 306
LSR++A +PAVD L+S SR+M P+I EH A ++ +L Y+ +D+I I
Sbjct: 339 LSRSLAASNHFPAVDVLNSVSRLM-PDITTEEHRAWAGRLRDLLAAYRQAEDLINI 393
>UniRef50_Q52371 Cluster: Type III secretion ATP synthase hrcN;
n=18; Pseudomonas|Rep: Type III secretion ATP synthase
hrcN - Pseudomonas syringae pv. syringae
Length = 449
Score = 41.1 bits (92), Expect = 0.019
Identities = 20/56 (35%), Positives = 34/56 (60%)
Frame = -3
Query: 473 LSRAIAELGIYPAVDPLDSTSRIMDPNIIGAEHYNVARGVQKILQDYKSLQDIIAI 306
LSR +AE G YPA+D S SRI+ N+ G +H ++++L YK ++ ++ +
Sbjct: 344 LSRKLAERGHYPAIDVSASISRILS-NVTGRKHQRANNRLRQLLAAYKQVEMLLRL 398
>UniRef50_Q8R9Z1 Cluster: Flagellar biosynthesis/type III secretory
pathway ATPase; n=10; Bacteria|Rep: Flagellar
biosynthesis/type III secretory pathway ATPase -
Thermoanaerobacter tengcongensis
Length = 437
Score = 39.5 bits (88), Expect = 0.058
Identities = 22/56 (39%), Positives = 32/56 (57%)
Frame = -3
Query: 473 LSRAIAELGIYPAVDPLDSTSRIMDPNIIGAEHYNVARGVQKILQDYKSLQDIIAI 306
LSR +A YPA+D L S SR+++ +II EH + + IL Y +D+I I
Sbjct: 335 LSRKLANKNHYPAIDVLASVSRVIN-DIITDEHKELVAKFKNILATYAEAEDLINI 389
>UniRef50_Q8VNS1 Cluster: EscN protein; n=11;
Enterobacteriaceae|Rep: EscN protein - Escherichia coli
Length = 446
Score = 39.5 bits (88), Expect = 0.058
Identities = 20/56 (35%), Positives = 35/56 (62%)
Frame = -3
Query: 473 LSRAIAELGIYPAVDPLDSTSRIMDPNIIGAEHYNVARGVQKILQDYKSLQDIIAI 306
L+R +AE +PA+D S SR+M N++ +EH A +K++ YK+++ +I I
Sbjct: 345 LTRELAEENHFPAIDIGLSASRVMH-NVVKSEHLRAAAECKKLIATYKNIELLIRI 399
>UniRef50_A3SFS3 Cluster: Flagellum-specific ATP synthase; n=2;
Sulfitobacter|Rep: Flagellum-specific ATP synthase -
Sulfitobacter sp. EE-36
Length = 463
Score = 39.1 bits (87), Expect = 0.077
Identities = 20/56 (35%), Positives = 31/56 (55%)
Frame = -3
Query: 473 LSRAIAELGIYPAVDPLDSTSRIMDPNIIGAEHYNVARGVQKILQDYKSLQDIIAI 306
L R IAE G +PA+D S SR++ P E Y + + +K L Y ++D+I +
Sbjct: 338 LDRRIAEQGRFPAIDLQKSLSRML-PGCHSPEEYEITKVARKALGRYADMEDLIRL 392
>UniRef50_O05528 Cluster: Flagellum-specific ATP synthase; n=26;
Alphaproteobacteria|Rep: Flagellum-specific ATP synthase
- Caulobacter crescentus (Caulobacter vibrioides)
Length = 444
Score = 39.1 bits (87), Expect = 0.077
Identities = 18/56 (32%), Positives = 34/56 (60%)
Frame = -3
Query: 473 LSRAIAELGIYPAVDPLDSTSRIMDPNIIGAEHYNVARGVQKILQDYKSLQDIIAI 306
+ RAIAE G +PA++ L S SR M P ++ +G ++++ Y +++++I I
Sbjct: 340 MERAIAERGRFPAINVLKSISRTM-PGCQHPHERDIVKGARQVMSAYSNMEELIRI 394
>UniRef50_A7CYE2 Cluster: Flagellar protein export ATPase FliI; n=1;
Opitutaceae bacterium TAV2|Rep: Flagellar protein export
ATPase FliI - Opitutaceae bacterium TAV2
Length = 461
Score = 38.7 bits (86), Expect = 0.10
Identities = 22/56 (39%), Positives = 32/56 (57%)
Frame = -3
Query: 473 LSRAIAELGIYPAVDPLDSTSRIMDPNIIGAEHYNVARGVQKILQDYKSLQDIIAI 306
LSRA+A YPA+D L+S SR + +I A A +++L YK +D+I I
Sbjct: 351 LSRALAHANHYPAIDVLESVSR-LTRDICSATEVESAARARELLAIYKRNEDLITI 405
>UniRef50_P26465 Cluster: Flagellum-specific ATP synthase; n=258;
cellular organisms|Rep: Flagellum-specific ATP synthase
- Salmonella typhimurium
Length = 456
Score = 38.7 bits (86), Expect = 0.10
Identities = 20/56 (35%), Positives = 34/56 (60%)
Frame = -3
Query: 473 LSRAIAELGIYPAVDPLDSTSRIMDPNIIGAEHYNVARGVQKILQDYKSLQDIIAI 306
LSR +AE G YPA+D S SR M +I +HY R +++L ++ +D++++
Sbjct: 353 LSRRLAEAGHYPAIDIEASISRAMTA-LITEQHYARVRLFKQLLSSFQRNRDLVSV 407
>UniRef50_P74857 Cluster: Probable secretion system apparatus ATP
synthase ssaN; n=17; Gammaproteobacteria|Rep: Probable
secretion system apparatus ATP synthase ssaN -
Salmonella typhimurium
Length = 433
Score = 38.3 bits (85), Expect = 0.13
Identities = 21/56 (37%), Positives = 34/56 (60%)
Frame = -3
Query: 473 LSRAIAELGIYPAVDPLDSTSRIMDPNIIGAEHYNVARGVQKILQDYKSLQDIIAI 306
LSR +AE G YPA+D L + SR+ P + EH +A +++ L Y+ ++ +I I
Sbjct: 331 LSRRLAERGHYPAIDVLATLSRVF-PVVTSHEHRQLAAILRRCLALYQEVELLIRI 385
>UniRef50_Q7Z601 Cluster: Probable G-protein coupled receptor 142;
n=18; Amniota|Rep: Probable G-protein coupled receptor
142 - Homo sapiens (Human)
Length = 462
Score = 37.9 bits (84), Expect = 0.18
Identities = 31/73 (42%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Frame = -3
Query: 353 QKILQDYKSLQDIIAILGMDELSEEDKLTVARAVKFRGSSHNLSK*LRCSLDMRVN*YHL 174
QKI SLQDI A+LG + +EEDK V+ A K + S + S+ LR S + + L
Sbjct: 10 QKIQWVPTSLQDITAVLGTEAYTEEDKSMVSHAQKSQHSCLSHSRWLR-SPQVTGGSWDL 68
Query: 173 R-KLSKDSPKF*Q 138
R + SKDS F Q
Sbjct: 69 RIRPSKDSSSFRQ 81
>UniRef50_Q7UIJ0 Cluster: Flagellum-specific ATP synthase; n=3;
Planctomycetaceae|Rep: Flagellum-specific ATP synthase -
Rhodopirellula baltica
Length = 467
Score = 37.5 bits (83), Expect = 0.23
Identities = 17/56 (30%), Positives = 35/56 (62%)
Frame = -3
Query: 473 LSRAIAELGIYPAVDPLDSTSRIMDPNIIGAEHYNVARGVQKILQDYKSLQDIIAI 306
L+R +A G YP +D +S SR+ + +++ E Y G+++ + Y++ +D+I+I
Sbjct: 346 LNRKLAHRGHYPPIDIPESISRVAN-HLVTPETYQATLGIREHMVQYQTSEDLISI 400
>UniRef50_Q2IQ94 Cluster: Sodium-transporting two-sector ATPase;
n=3; Bacteria|Rep: Sodium-transporting two-sector ATPase
- Anaeromyxobacter dehalogenans (strain 2CP-C)
Length = 475
Score = 37.5 bits (83), Expect = 0.23
Identities = 26/80 (32%), Positives = 39/80 (48%), Gaps = 4/80 (5%)
Frame = -3
Query: 473 LSRAIAELGIYPAVDPLDSTSRIM----DPNIIGAEHYNVARGVQKILQDYKSLQDIIAI 306
LSR + G+YP +D L S SR+M P +H VA + + ++ + AI
Sbjct: 337 LSRDLDRRGVYPPIDVLPSLSRLMGLGAGPGKTRDDHRPVADQLYAFYARGRDVRRMAAI 396
Query: 305 LGMDELSEEDKLTVARAVKF 246
+G L EE+K +A A F
Sbjct: 397 VGAANLGEEEKRLLAFADAF 416
>UniRef50_Q2CGJ3 Cluster: Flagellum-specific ATP synthase; n=1;
Oceanicola granulosus HTCC2516|Rep: Flagellum-specific
ATP synthase - Oceanicola granulosus HTCC2516
Length = 438
Score = 36.7 bits (81), Expect = 0.41
Identities = 18/56 (32%), Positives = 32/56 (57%)
Frame = -3
Query: 473 LSRAIAELGIYPAVDPLDSTSRIMDPNIIGAEHYNVARGVQKILQDYKSLQDIIAI 306
L R IAE G YPA+D S SR++ P+ G + + + ++ L Y +++++ I
Sbjct: 324 LDRRIAERGRYPAIDLQRSVSRML-PDCHGPDEFAILSAARRALGRYGDMEELVRI 378
>UniRef50_Q1GNY4 Cluster: ATPase FliI/YscN; n=6; Bacteria|Rep:
ATPase FliI/YscN - Sphingopyxis alaskensis (Sphingomonas
alaskensis)
Length = 443
Score = 36.7 bits (81), Expect = 0.41
Identities = 22/69 (31%), Positives = 38/69 (55%), Gaps = 4/69 (5%)
Frame = -3
Query: 473 LSRAIAELGIYPAVDPLDSTSRIMDPNIIGAEHYNVARGVQKILQDYKSLQDIIA----I 306
LSR +AE G+YPA+D S SR M + + A+H A +++ Y+ +D++ +
Sbjct: 341 LSRQLAEQGVYPAIDVARSLSRTM-ADSVDADHAAAAARFRQLWSLYEENRDLMLMGAYV 399
Query: 305 LGMDELSEE 279
G D + +E
Sbjct: 400 AGADPILDE 408
>UniRef50_Q058C4 Cluster: Flagellum-specific ATP synthase; n=1;
Buchnera aphidicola str. Cc (Cinara cedri)|Rep:
Flagellum-specific ATP synthase - Buchnera aphidicola
subsp. Cinara cedri
Length = 457
Score = 36.7 bits (81), Expect = 0.41
Identities = 19/54 (35%), Positives = 32/54 (59%)
Frame = -3
Query: 473 LSRAIAELGIYPAVDPLDSTSRIMDPNIIGAEHYNVARGVQKILQDYKSLQDII 312
LS ++E G YPA++ S SR+M +I+ +HY + ++K++ Y DII
Sbjct: 354 LSNVLSESGHYPAINIEKSISRLMS-SIVDHDHYQYSIYIKKLISCYYKNYDII 406
>UniRef50_A4EBH3 Cluster: Putative uncharacterized protein; n=1;
Collinsella aerofaciens ATCC 25986|Rep: Putative
uncharacterized protein - Collinsella aerofaciens ATCC
25986
Length = 678
Score = 36.3 bits (80), Expect = 0.54
Identities = 19/50 (38%), Positives = 32/50 (64%)
Frame = +3
Query: 288 QLVHTQNSNNVLQGFVVLKNFLNSTCNIVVLSSNNIGVHDTGS*VKRIHS 437
QLVHTQN ++VL+ V+L+ L+ + VVL +++ G+ G +R+ S
Sbjct: 213 QLVHTQNCDDVLKVGVLLQELLDLDGDTVVLLADDRGIESVGGRRERVDS 262
>UniRef50_P55717 Cluster: Probable ATP synthase y4yI; n=27;
Bacteria|Rep: Probable ATP synthase y4yI - Rhizobium sp.
(strain NGR234)
Length = 451
Score = 35.9 bits (79), Expect = 0.72
Identities = 19/56 (33%), Positives = 30/56 (53%)
Frame = -3
Query: 473 LSRAIAELGIYPAVDPLDSTSRIMDPNIIGAEHYNVARGVQKILQDYKSLQDIIAI 306
LSRA+A +PA+D L S SR+MD ++ H A + +L Y + +I +
Sbjct: 350 LSRALAARSHFPAIDVLQSRSRVMDA-VVSETHRKAASFFRDLLARYAECEFLINV 404
>UniRef50_Q0VLP7 Cluster: Acyl-CoA dehydrogenase, putative; n=1;
Alcanivorax borkumensis SK2|Rep: Acyl-CoA dehydrogenase,
putative - Alcanivorax borkumensis (strain SK2 / ATCC
700651 / DSM 11573)
Length = 764
Score = 35.5 bits (78), Expect = 0.95
Identities = 18/35 (51%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
Frame = -2
Query: 156 FSKILAGDYDHLPE-VAFYMVGPIEEVVAKADTLA 55
F KILA +YD LPE Y+ GP+EE++ AD+ A
Sbjct: 44 FEKILAENYDTLPEHEQAYIDGPVEELLRMADSYA 78
>UniRef50_A6Q2N1 Cluster: Flagellar-specific ATP synthase FliI; n=1;
Nitratiruptor sp. SB155-2|Rep: Flagellar-specific ATP
synthase FliI - Nitratiruptor sp. (strain SB155-2)
Length = 431
Score = 35.5 bits (78), Expect = 0.95
Identities = 22/71 (30%), Positives = 39/71 (54%)
Frame = -3
Query: 473 LSRAIAELGIYPAVDPLDSTSRIMDPNIIGAEHYNVARGVQKILQDYKSLQDIIAILGMD 294
LS+ +A+ ++PAVDPL S SR+ P ++ +E +I YK +D+I +G+
Sbjct: 320 LSKEMAQKRVFPAVDPLKSISRLA-PQLVPSEILEFQAQFIQIYALYKENEDMIN-MGLY 377
Query: 293 ELSEEDKLTVA 261
+ K+ +A
Sbjct: 378 KPGSSQKIDLA 388
>UniRef50_Q53153 Cluster: FliI protein; n=7; Rhodobacteraceae|Rep:
FliI protein - Rhodobacter sphaeroides (Rhodopseudomonas
sphaeroides)
Length = 442
Score = 35.1 bits (77), Expect = 1.3
Identities = 17/58 (29%), Positives = 34/58 (58%)
Frame = -3
Query: 473 LSRAIAELGIYPAVDPLDSTSRIMDPNIIGAEHYNVARGVQKILQDYKSLQDIIAILG 300
LSR ++G+YPA+D S SR M+ +++ H A +++++ Y +D++ + G
Sbjct: 340 LSRRQTQMGLYPAIDIPHSVSRTMN-DVVDDRHRRAAARLRQLIALYSDNRDLMLMGG 396
>UniRef50_A3WGS0 Cluster: FliI, Flagellum-specific ATPase; n=2;
Erythrobacter|Rep: FliI, Flagellum-specific ATPase -
Erythrobacter sp. NAP1
Length = 450
Score = 35.1 bits (77), Expect = 1.3
Identities = 23/73 (31%), Positives = 39/73 (53%)
Frame = -3
Query: 473 LSRAIAELGIYPAVDPLDSTSRIMDPNIIGAEHYNVARGVQKILQDYKSLQDIIAILGMD 294
LSR +A+ G YPA+D S SR+M +I AE AR ++ ++ + +D++ ++G
Sbjct: 339 LSRELAQRGHYPAIDIPASLSRVMH-DIASAEQLEAARRLRALIAAREHNRDLV-MMGAY 396
Query: 293 ELSEEDKLTVARA 255
+ L A A
Sbjct: 397 RAGSDPDLDCALA 409
>UniRef50_P0A1B9 Cluster: Probable ATP synthase spaL; n=32;
Proteobacteria|Rep: Probable ATP synthase spaL -
Salmonella typhimurium
Length = 431
Score = 35.1 bits (77), Expect = 1.3
Identities = 24/79 (30%), Positives = 38/79 (48%)
Frame = -3
Query: 473 LSRAIAELGIYPAVDPLDSTSRIMDPNIIGAEHYNVARGVQKILQDYKSLQDIIAILGMD 294
LSR +A G YPA+D L S SR+ + H A V+K++ + LQ + +
Sbjct: 328 LSRKLAGQGHYPAIDVLKSVSRVFG-QVTTPTHAEQASAVRKLMTRLEELQ---LFIDLG 383
Query: 293 ELSEEDKLTVARAVKFRGS 237
E + + RA++ R S
Sbjct: 384 EYRPGENIDNDRAMQMRDS 402
>UniRef50_Q54TM7 Cluster: Leucine-rich repeat-containing protein;
n=2; Dictyostelium discoideum|Rep: Leucine-rich
repeat-containing protein - Dictyostelium discoideum AX4
Length = 1288
Score = 34.7 bits (76), Expect = 1.7
Identities = 20/74 (27%), Positives = 38/74 (51%)
Frame = -3
Query: 467 RAIAELGIYPAVDPLDSTSRIMDPNIIGAEHYNVARGVQKILQDYKSLQDIIAILGMDEL 288
+ I + + PA+ P+D+ S I + + + + ++ L D+K Q I L + +L
Sbjct: 582 KVINKAHVNPALPPIDTASTIAVAQVFAQKELDTKKRKKENLDDFKK-QHIETELKLKQL 640
Query: 287 SEEDKLTVARAVKF 246
EE ++ A+A KF
Sbjct: 641 EEELQIANAKATKF 654
>UniRef50_P52607 Cluster: Flagellum-specific ATP synthase; n=3;
Borrelia burgdorferi group|Rep: Flagellum-specific ATP
synthase - Borrelia burgdorferi (Lyme disease
spirochete)
Length = 436
Score = 34.7 bits (76), Expect = 1.7
Identities = 18/54 (33%), Positives = 30/54 (55%)
Frame = -3
Query: 473 LSRAIAELGIYPAVDPLDSTSRIMDPNIIGAEHYNVARGVQKILQDYKSLQDII 312
L R + + GIYP+++ L STSR + I+ E + + +L YK +D+I
Sbjct: 335 LDRDLFDRGIYPSINVLSSTSRSIH-RIMSLEKQKLIMKARNLLSIYKDYEDLI 387
>UniRef50_Q2SEY6 Cluster: Flagellum-specific ATP synthase; n=1;
Hahella chejuensis KCTC 2396|Rep: Flagellum-specific ATP
synthase - Hahella chejuensis (strain KCTC 2396)
Length = 416
Score = 34.3 bits (75), Expect = 2.2
Identities = 17/56 (30%), Positives = 31/56 (55%)
Frame = -3
Query: 473 LSRAIAELGIYPAVDPLDSTSRIMDPNIIGAEHYNVARGVQKILQDYKSLQDIIAI 306
L R +A GI+PA+D +S SR+ P + G E R + ++ Y+ +++I +
Sbjct: 313 LKRQLAHQGIFPAIDIRESMSRLF-PRVTGKEQQMAVRELIRLESLYQESKELIEL 367
>UniRef50_A0DJD2 Cluster: Chromosome undetermined scaffold_53, whole
genome shotgun sequence; n=4; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_53,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 591
Score = 34.3 bits (75), Expect = 2.2
Identities = 19/49 (38%), Positives = 27/49 (55%)
Frame = -3
Query: 251 KFRGSSHNLSK*LRCSLDMRVN*YHLRKLSKDSPKF*QGTMIICQK*HS 105
K++ S HN S L+ S + RVN +HL L DS + ++ QK HS
Sbjct: 11 KYKDSFHNHSSCLKSSQEERVNSFHLMTLFLDSEHYLMAKVMNTQKMHS 59
>UniRef50_Q08637 Cluster: V-type sodium ATP synthase subunit B (EC
3.6.3.15) (Na(+)- translocating ATPase subunit B); n=14;
cellular organisms|Rep: V-type sodium ATP synthase
subunit B (EC 3.6.3.15) (Na(+)- translocating ATPase
subunit B) - Enterococcus hirae
Length = 458
Score = 34.3 bits (75), Expect = 2.2
Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 4/86 (4%)
Frame = -3
Query: 473 LSRAIAELGIYPAVDPLDSTSRIMDPNI-IGAEHYNVARGVQKILQDY---KSLQDIIAI 306
L+R + + GI P +D L S SR+ D G + A + ++ Y K +++ +
Sbjct: 329 LTRELYKSGIQPPIDVLPSLSRLKDKGTGAGKTREDHAATMNQLFAAYAQGKQAKELAVV 388
Query: 305 LGMDELSEEDKLTVARAVKFRGSSHN 228
LG LS+ DK+ A +F N
Sbjct: 389 LGESALSDIDKIYAKFAERFENEYVN 414
>UniRef50_Q74G36 Cluster: Flagellum-specific ATP synthase FliI;
n=15; Bacteria|Rep: Flagellum-specific ATP synthase FliI
- Geobacter sulfurreducens
Length = 441
Score = 33.5 bits (73), Expect = 3.8
Identities = 18/56 (32%), Positives = 31/56 (55%)
Frame = -3
Query: 473 LSRAIAELGIYPAVDPLDSTSRIMDPNIIGAEHYNVARGVQKILQDYKSLQDIIAI 306
L+R +A IYP +D L S SR+M+ ++ A +++L Y+ +D+I I
Sbjct: 335 LNRELAARAIYPPLDILASASRVMN-DVTERSQQQFASRFKELLAAYRQAEDLINI 389
>UniRef50_Q02C61 Cluster: ATPase, FliI/YscN family; n=2;
Bacteria|Rep: ATPase, FliI/YscN family - Solibacter
usitatus (strain Ellin6076)
Length = 449
Score = 33.5 bits (73), Expect = 3.8
Identities = 19/56 (33%), Positives = 29/56 (51%)
Frame = -3
Query: 473 LSRAIAELGIYPAVDPLDSTSRIMDPNIIGAEHYNVARGVQKILQDYKSLQDIIAI 306
LSR + G YPA+D L S SR+ A+ AR ++ L Y+ +D+I +
Sbjct: 334 LSRDLGAQGHYPAIDILHSVSRLTSAIATPAQK-EAARKIRAALAAYRDAEDLIQL 388
>UniRef50_A6C8U5 Cluster: Transcriptional regulator; n=1;
Planctomyces maris DSM 8797|Rep: Transcriptional
regulator - Planctomyces maris DSM 8797
Length = 405
Score = 33.5 bits (73), Expect = 3.8
Identities = 15/44 (34%), Positives = 27/44 (61%)
Frame = -2
Query: 333 QIPAGHYCYFGYGRVV*RRQVDSGTCSKIQRFLSQPFQVAEVFT 202
++PA H CYFG + +++D+ + ++R LSQP + +FT
Sbjct: 251 ELPADH-CYFGTDGTIDMQELDNEIEAALKRILSQPDRPTAIFT 293
>UniRef50_Q85X22 Cluster: ORF50f; n=1; Pinus koraiensis|Rep: ORF50f
- Pinus koraiensis (Korean pine)
Length = 50
Score = 33.5 bits (73), Expect = 3.8
Identities = 17/24 (70%), Positives = 18/24 (75%)
Frame = +1
Query: 250 FTARATVNLSSSDNSSIPKIAIMS 321
F A AT+ SSSDNSS P IAIMS
Sbjct: 27 FLALATIKRSSSDNSSSPGIAIMS 50
Score = 32.7 bits (71), Expect = 6.7
Identities = 16/25 (64%), Positives = 17/25 (68%)
Frame = +2
Query: 182 TSLPACPVNTSATWKGCERNL*ILL 256
T LP PVNTSAT KGC+R I L
Sbjct: 4 TYLPGEPVNTSATKKGCDRKRSIFL 28
>UniRef50_Q6BKD0 Cluster: Similar to CA5636|IPF473 Candida albicans
IPF473; n=2; Saccharomycetaceae|Rep: Similar to
CA5636|IPF473 Candida albicans IPF473 - Debaryomyces
hansenii (Yeast) (Torulaspora hansenii)
Length = 455
Score = 33.5 bits (73), Expect = 3.8
Identities = 29/86 (33%), Positives = 41/86 (47%)
Frame = -3
Query: 407 IMDPNIIGAEHYNVARGVQKILQDYKSLQDIIAILGMDELSEEDKLTVARAVKFRGSSHN 228
++D N I H NV G+Q++ DY+ LQ II I M EL D L + + SS
Sbjct: 120 VVDTNFI-LSHLNVVNGLQEVADDYR-LQIIIPITVMKEL---DGLKNSNRIANEESSDK 174
Query: 227 LSK*LRCSLDMRVN*YHLRKLSKDSP 150
+S L N + L+K+SP
Sbjct: 175 ISNQSVGHLARWANDWIYSALAKNSP 200
>UniRef50_Q3J9F4 Cluster: Sodium-transporting two-sector ATPase;
n=5; cellular organisms|Rep: Sodium-transporting
two-sector ATPase - Nitrosococcus oceani (strain ATCC
19707 / NCIMB 11848)
Length = 479
Score = 33.1 bits (72), Expect = 5.0
Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 4/71 (5%)
Frame = -3
Query: 473 LSRAIAELGIYPAVDPLDSTSRIM----DPNIIGAEHYNVARGVQKILQDYKSLQDIIAI 306
LSR + GIYP V+ S SR+M N +H VA + ++++ +I
Sbjct: 330 LSRELHHQGIYPPVNIPPSLSRLMKDGIGKNSTREDHPRVASQLYAAYAKALEVRNLASI 389
Query: 305 LGMDELSEEDK 273
+G +ELS D+
Sbjct: 390 IGAEELSPSDR 400
>UniRef50_A0Z379 Cluster: ATPase FliI/YscN; n=1; marine gamma
proteobacterium HTCC2080|Rep: ATPase FliI/YscN - marine
gamma proteobacterium HTCC2080
Length = 477
Score = 33.1 bits (72), Expect = 5.0
Identities = 20/56 (35%), Positives = 34/56 (60%)
Frame = -3
Query: 473 LSRAIAELGIYPAVDPLDSTSRIMDPNIIGAEHYNVARGVQKILQDYKSLQDIIAI 306
LSR +A+ G++PA+D S SR M A+ + AR V+ + Y++ +D+IA+
Sbjct: 345 LSRKMADSGLFPAIDIEASISRAMLQITDDAQQAH-ARKVRDVYATYQANRDLIAM 399
>UniRef50_Q23Q29 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 2761
Score = 33.1 bits (72), Expect = 5.0
Identities = 16/46 (34%), Positives = 27/46 (58%)
Frame = -1
Query: 589 KNYHHQEGSITSDRLFMYQLMTCRSCSATTFAHLDATTDSPEPLLN 452
KNY +Q SI+ + Q++TC+ CS T++ +D T+ + LN
Sbjct: 2057 KNYVNQNNSIS-----LIQMITCQECSYGTYSFIDPMTEYSQEALN 2097
>UniRef50_Q8F319 Cluster: Flagellum-specific ATP synthase fliI; n=4;
Leptospira|Rep: Flagellum-specific ATP synthase fliI -
Leptospira interrogans
Length = 454
Score = 32.7 bits (71), Expect = 6.7
Identities = 19/57 (33%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Frame = -3
Query: 473 LSRAIAELGIYPAVDPLDSTSRIMDPNIIGAEHYNVARG-VQKILQDYKSLQDIIAI 306
L+R +AE YPA+D S SR+M I E N+ G +++++ Y S +++I +
Sbjct: 345 LNRKLAEKNHYPAIDVPASLSRVMAR--IAPEDQNLRAGMIRELISVYNSAEELIRL 399
>UniRef50_A0EB18 Cluster: Chromosome undetermined scaffold_87, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_87,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 162
Score = 32.7 bits (71), Expect = 6.7
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = -1
Query: 349 KFFRTTNPCRTLLLFWVWTSCLK 281
K + TN + LLFWVW +CLK
Sbjct: 10 KHYTVTNHSKISLLFWVWMNCLK 32
>UniRef50_O83541 Cluster: V-type ATP synthase alpha chain 2; n=7;
Bacteria|Rep: V-type ATP synthase alpha chain 2 -
Treponema pallidum
Length = 605
Score = 32.7 bits (71), Expect = 6.7
Identities = 23/87 (26%), Positives = 38/87 (43%), Gaps = 5/87 (5%)
Frame = -3
Query: 485 CYH*LSRAIAELGIYPAVDPLDSTSRIMDPNIIGAEHYNVARGVQK-----ILQDYKSLQ 321
C+ L R +A YPA+ +DS S Y+ G + +L+ + LQ
Sbjct: 419 CFWALDRELAHARHYPAIGWIDSYSEYAQEVSAWWSKYDPRAGALRAAALDLLRKEQRLQ 478
Query: 320 DIIAILGMDELSEEDKLTVARAVKFRG 240
I+ ++G D L ED+L + +G
Sbjct: 479 QIVRLVGPDALPGEDRLVLMVCEMIKG 505
>UniRef50_A1SEP6 Cluster: ATPase, FliI/YscN family; n=10;
Bacteria|Rep: ATPase, FliI/YscN family - Nocardioides
sp. (strain BAA-499 / JS614)
Length = 435
Score = 32.3 bits (70), Expect = 8.8
Identities = 17/56 (30%), Positives = 35/56 (62%)
Frame = -3
Query: 473 LSRAIAELGIYPAVDPLDSTSRIMDPNIIGAEHYNVARGVQKILQDYKSLQDIIAI 306
LSR +A G +P++D L+S SR+ I + + R ++++L Y+S+++++ I
Sbjct: 333 LSRDLATSGHFPSIDVLESISRVASAIIEPSGRADGIR-LRRLLAAYRSVRELVEI 387
>UniRef50_A1EBU5 Cluster: SctN; n=1; Lysobacter enzymogenes|Rep:
SctN - Lysobacter enzymogenes
Length = 450
Score = 32.3 bits (70), Expect = 8.8
Identities = 18/56 (32%), Positives = 30/56 (53%)
Frame = -3
Query: 473 LSRAIAELGIYPAVDPLDSTSRIMDPNIIGAEHYNVARGVQKILQDYKSLQDIIAI 306
LSR +A YPA+D L S SR M P + H A ++K L ++ ++ ++ +
Sbjct: 349 LSRKLAAAYHYPAIDVLVSLSRTM-PRVADEAHQRAAGQLRKYLAKHQDIELLLQL 403
>UniRef50_A0BC74 Cluster: Chromosome undetermined scaffold_10, whole
genome shotgun sequence; n=6; cellular organisms|Rep:
Chromosome undetermined scaffold_10, whole genome shotgun
sequence - Paramecium tetraurelia
Length = 3807
Score = 32.3 bits (70), Expect = 8.8
Identities = 25/94 (26%), Positives = 46/94 (48%), Gaps = 12/94 (12%)
Frame = -2
Query: 315 YCYFGYGRVV*RRQV--------DSGTCSKIQRFLSQPFQV----AEVFTGHAGKLVPLE 172
Y Y+GY R + + QV D+ T ++ +L+ F V + + GH+GK+ ++
Sbjct: 2749 YVYYGYSRTISKAQVYVKWASSDDALTYDNVRHYLTPEFYVYVGRDKQYPGHSGKMGYVK 2808
Query: 171 ETIKGFSKILAGDYDHLPEVAFYMVGPIEEVVAK 70
+ S + ++DH P+ AF I+ +V K
Sbjct: 2809 FNLGDGSFLKDPNFDH-PQDAFGFKSGIDNLVKK 2841
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 601,550,165
Number of Sequences: 1657284
Number of extensions: 12053728
Number of successful extensions: 29433
Number of sequences better than 10.0: 75
Number of HSP's better than 10.0 without gapping: 28434
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29391
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 41488046300
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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