Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0300.Seq
         (595 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z69978-1|CAA93818.1|  268|Anopheles gambiae serine protease prot...    25   1.8  
AY333999-1|AAR01124.1|  268|Anopheles gambiae FBN23 protein.           24   4.3  
AF387862-2|AAL56548.1|  942|Anopheles gambiae pol polyprotein pr...    23   7.4  

>Z69978-1|CAA93818.1|  268|Anopheles gambiae serine protease
           protein.
          Length = 268

 Score = 25.0 bits (52), Expect = 1.8
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = -2

Query: 219 VAEVFTGHAGKLVPLEETIKGFSKILAGDYD 127
           +AE F   AG  VP   +  GF + +AG++D
Sbjct: 64  IAEKFVLTAGHCVPSAISPDGFPEAVAGEHD 94


>AY333999-1|AAR01124.1|  268|Anopheles gambiae FBN23 protein.
          Length = 268

 Score = 23.8 bits (49), Expect = 4.3
 Identities = 12/36 (33%), Positives = 18/36 (50%)
 Frame = -3

Query: 326 LQDIIAILGMDELSEEDKLTVARAVKFRGSSHNLSK 219
           +  +I +   D+L +   LTV+RAV  R      SK
Sbjct: 111 MPQVIHVSREDQLKDSSGLTVSRAVLVRSCKEEPSK 146


>AF387862-2|AAL56548.1|  942|Anopheles gambiae pol polyprotein
           protein.
          Length = 942

 Score = 23.0 bits (47), Expect = 7.4
 Identities = 10/26 (38%), Positives = 16/26 (61%), Gaps = 2/26 (7%)
 Frame = -2

Query: 192 GKLVPLEETI--KGFSKILAGDYDHL 121
           GK+V  +  +  KGFS++   DYD +
Sbjct: 487 GKIVQYKARLVAKGFSQVYGADYDEV 512


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 633,164
Number of Sequences: 2352
Number of extensions: 12565
Number of successful extensions: 15
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 57188952
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)