Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0300.Seq
(595 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X05606-1|CAA29095.1| 312|Homo sapiens beta-subunit (AA 1-312) p... 156 6e-38
X03559-1|CAA27246.1| 539|Homo sapiens protein ( Human mRNA for ... 156 6e-38
M27132-1|AAA51809.1| 529|Homo sapiens ATP synthase beta subunit... 156 6e-38
D00022-1|BAA00016.1| 539|Homo sapiens F1 beta subunit protein. 156 6e-38
DQ403107-1|ABD77240.1| 445|Homo sapiens mitochondrial ATP synth... 156 6e-38
BC016512-1|AAH16512.1| 529|Homo sapiens ATP synthase, H+ transp... 156 6e-38
M19483-1|AAA51808.1| 529|Homo sapiens ATPSB protein. 154 2e-37
AY288421-1|AAP72130.1| 462|Homo sapiens G protein-coupled recep... 38 0.027
AB196530-1|BAD97441.1| 462|Homo sapiens G protein-coupled recep... 38 0.027
L09234-1|AAA35578.1| 615|Homo sapiens ATPase protein. 32 1.8
M60346-1|AAA35610.1| 406|Homo sapiens H+-ATPase B subunit protein. 31 4.1
L09235-1|AAA83249.1| 617|Homo sapiens ATPase protein. 30 5.4
BT006672-1|AAP35318.1| 617|Homo sapiens ATPase, H+ transporting... 30 5.4
BC013138-1|AAH13138.1| 617|Homo sapiens ATPase, H+ transporting... 30 5.4
AF113129-1|AAF14870.1| 617|Homo sapiens vacuolar ATPase isoform... 30 5.4
M25809-1|AAA36498.1| 511|Homo sapiens protein ( Human endomembr... 29 9.4
BC063411-1|AAH63411.1| 513|Homo sapiens ATPase, H+ transporting... 29 9.4
AK223151-1|BAD96871.1| 513|Homo sapiens ATPase, H+ transporting... 29 9.4
AF107478-1|AAD11943.1| 426|Homo sapiens H+-ATPase beta 1 subuni... 29 9.4
>X05606-1|CAA29095.1| 312|Homo sapiens beta-subunit (AA 1-312)
protein.
Length = 312
Score = 156 bits (378), Expect = 6e-38
Identities = 82/104 (78%), Positives = 87/104 (83%), Gaps = 1/104 (0%)
Frame = -3
Query: 551 QAIYVPADDL-QILLRYHFCSLGCYH*LSRAIAELGIYPAVDPLDSTSRIMDPNIIGAEH 375
QAIYVPADDL F L LSRAIAELGIYPAVDPLDSTSRIMDPNI+G+EH
Sbjct: 141 QAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVGSEH 200
Query: 374 YNVARGVQKILQDYKSLQDIIAILGMDELSEEDKLTVARAVKFR 243
Y+VARGVQKILQDYKSLQDIIAILGMDELSEEDKLTV+RA K +
Sbjct: 201 YDVARGVQKILQDYKSLQDIIAILGMDELSEEDKLTVSRARKIQ 244
Score = 124 bits (299), Expect = 2e-28
Identities = 58/67 (86%), Positives = 62/67 (92%)
Frame = -2
Query: 252 KIQRFLSQPFQVAEVFTGHAGKLVPLEETIKGFSKILAGDYDHLPEVAFYMVGPIEEVVA 73
KIQRFLSQPFQVAEVFTGH GKLVPL+ETIKGF +ILAG+YDHLPE AFYMVGPIEE VA
Sbjct: 242 KIQRFLSQPFQVAEVFTGHMGKLVPLKETIKGFQQILAGEYDHLPEQAFYMVGPIEEAVA 301
Query: 72 KADTLAK 52
KAD LA+
Sbjct: 302 KADKLAE 308
>X03559-1|CAA27246.1| 539|Homo sapiens protein ( Human mRNA for
F1-ATPase beta subunit (F-1 beta). ).
Length = 539
Score = 156 bits (378), Expect = 6e-38
Identities = 82/104 (78%), Positives = 87/104 (83%), Gaps = 1/104 (0%)
Frame = -3
Query: 551 QAIYVPADDL-QILLRYHFCSLGCYH*LSRAIAELGIYPAVDPLDSTSRIMDPNIIGAEH 375
QAIYVPADDL F L LSRAIAELGIYPAVDPLDSTSRIMDPNI+G+EH
Sbjct: 368 QAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVGSEH 427
Query: 374 YNVARGVQKILQDYKSLQDIIAILGMDELSEEDKLTVARAVKFR 243
Y+VARGVQKILQDYKSLQDIIAILGMDELSEEDKLTV+RA K +
Sbjct: 428 YDVARGVQKILQDYKSLQDIIAILGMDELSEEDKLTVSRARKIQ 471
Score = 124 bits (299), Expect = 2e-28
Identities = 58/67 (86%), Positives = 62/67 (92%)
Frame = -2
Query: 252 KIQRFLSQPFQVAEVFTGHAGKLVPLEETIKGFSKILAGDYDHLPEVAFYMVGPIEEVVA 73
KIQRFLSQPFQVAEVFTGH GKLVPL+ETIKGF +ILAG+YDHLPE AFYMVGPIEE VA
Sbjct: 469 KIQRFLSQPFQVAEVFTGHMGKLVPLKETIKGFQQILAGEYDHLPEQAFYMVGPIEEAVA 528
Query: 72 KADTLAK 52
KAD LA+
Sbjct: 529 KADKLAE 535
>M27132-1|AAA51809.1| 529|Homo sapiens ATP synthase beta subunit
precursor protein.
Length = 529
Score = 156 bits (378), Expect = 6e-38
Identities = 82/104 (78%), Positives = 87/104 (83%), Gaps = 1/104 (0%)
Frame = -3
Query: 551 QAIYVPADDL-QILLRYHFCSLGCYH*LSRAIAELGIYPAVDPLDSTSRIMDPNIIGAEH 375
QAIYVPADDL F L LSRAIAELGIYPAVDPLDSTSRIMDPNI+G+EH
Sbjct: 358 QAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVGSEH 417
Query: 374 YNVARGVQKILQDYKSLQDIIAILGMDELSEEDKLTVARAVKFR 243
Y+VARGVQKILQDYKSLQDIIAILGMDELSEEDKLTV+RA K +
Sbjct: 418 YDVARGVQKILQDYKSLQDIIAILGMDELSEEDKLTVSRARKIQ 461
Score = 124 bits (299), Expect = 2e-28
Identities = 58/67 (86%), Positives = 62/67 (92%)
Frame = -2
Query: 252 KIQRFLSQPFQVAEVFTGHAGKLVPLEETIKGFSKILAGDYDHLPEVAFYMVGPIEEVVA 73
KIQRFLSQPFQVAEVFTGH GKLVPL+ETIKGF +ILAG+YDHLPE AFYMVGPIEE VA
Sbjct: 459 KIQRFLSQPFQVAEVFTGHMGKLVPLKETIKGFQQILAGEYDHLPEQAFYMVGPIEEAVA 518
Query: 72 KADTLAK 52
KAD LA+
Sbjct: 519 KADKLAE 525
>D00022-1|BAA00016.1| 539|Homo sapiens F1 beta subunit protein.
Length = 539
Score = 156 bits (378), Expect = 6e-38
Identities = 82/104 (78%), Positives = 87/104 (83%), Gaps = 1/104 (0%)
Frame = -3
Query: 551 QAIYVPADDL-QILLRYHFCSLGCYH*LSRAIAELGIYPAVDPLDSTSRIMDPNIIGAEH 375
QAIYVPADDL F L LSRAIAELGIYPAVDPLDSTSRIMDPNI+G+EH
Sbjct: 368 QAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVGSEH 427
Query: 374 YNVARGVQKILQDYKSLQDIIAILGMDELSEEDKLTVARAVKFR 243
Y+VARGVQKILQDYKSLQDIIAILGMDELSEEDKLTV+RA K +
Sbjct: 428 YDVARGVQKILQDYKSLQDIIAILGMDELSEEDKLTVSRARKIQ 471
Score = 124 bits (299), Expect = 2e-28
Identities = 58/67 (86%), Positives = 62/67 (92%)
Frame = -2
Query: 252 KIQRFLSQPFQVAEVFTGHAGKLVPLEETIKGFSKILAGDYDHLPEVAFYMVGPIEEVVA 73
KIQRFLSQPFQVAEVFTGH GKLVPL+ETIKGF +ILAG+YDHLPE AFYMVGPIEE VA
Sbjct: 469 KIQRFLSQPFQVAEVFTGHMGKLVPLKETIKGFQQILAGEYDHLPEQAFYMVGPIEEAVA 528
Query: 72 KADTLAK 52
KAD LA+
Sbjct: 529 KADKLAE 535
>DQ403107-1|ABD77240.1| 445|Homo sapiens mitochondrial ATP
synthase, H+ transporting F1 complex beta subunit
protein.
Length = 445
Score = 156 bits (378), Expect = 6e-38
Identities = 82/104 (78%), Positives = 87/104 (83%), Gaps = 1/104 (0%)
Frame = -3
Query: 551 QAIYVPADDL-QILLRYHFCSLGCYH*LSRAIAELGIYPAVDPLDSTSRIMDPNIIGAEH 375
QAIYVPADDL F L LSRAIAELGIYPAVDPLDSTSRIMDPNI+G+EH
Sbjct: 294 QAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVGSEH 353
Query: 374 YNVARGVQKILQDYKSLQDIIAILGMDELSEEDKLTVARAVKFR 243
Y+VARGVQKILQDYKSLQDIIAILGMDELSEEDKLTV+RA K +
Sbjct: 354 YDVARGVQKILQDYKSLQDIIAILGMDELSEEDKLTVSRARKIQ 397
Score = 99.5 bits (237), Expect = 8e-21
Identities = 45/51 (88%), Positives = 48/51 (94%)
Frame = -2
Query: 252 KIQRFLSQPFQVAEVFTGHAGKLVPLEETIKGFSKILAGDYDHLPEVAFYM 100
KIQRFLSQPFQVAEVFTGH GKLVPL+ETIKGF +ILAG+YDHLPE AFYM
Sbjct: 395 KIQRFLSQPFQVAEVFTGHMGKLVPLKETIKGFQQILAGEYDHLPEQAFYM 445
>BC016512-1|AAH16512.1| 529|Homo sapiens ATP synthase, H+
transporting, mitochondrial F1 complex, beta polypeptide
protein.
Length = 529
Score = 156 bits (378), Expect = 6e-38
Identities = 82/104 (78%), Positives = 87/104 (83%), Gaps = 1/104 (0%)
Frame = -3
Query: 551 QAIYVPADDL-QILLRYHFCSLGCYH*LSRAIAELGIYPAVDPLDSTSRIMDPNIIGAEH 375
QAIYVPADDL F L LSRAIAELGIYPAVDPLDSTSRIMDPNI+G+EH
Sbjct: 358 QAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVGSEH 417
Query: 374 YNVARGVQKILQDYKSLQDIIAILGMDELSEEDKLTVARAVKFR 243
Y+VARGVQKILQDYKSLQDIIAILGMDELSEEDKLTV+RA K +
Sbjct: 418 YDVARGVQKILQDYKSLQDIIAILGMDELSEEDKLTVSRARKIQ 461
Score = 124 bits (299), Expect = 2e-28
Identities = 58/67 (86%), Positives = 62/67 (92%)
Frame = -2
Query: 252 KIQRFLSQPFQVAEVFTGHAGKLVPLEETIKGFSKILAGDYDHLPEVAFYMVGPIEEVVA 73
KIQRFLSQPFQVAEVFTGH GKLVPL+ETIKGF +ILAG+YDHLPE AFYMVGPIEE VA
Sbjct: 459 KIQRFLSQPFQVAEVFTGHMGKLVPLKETIKGFQQILAGEYDHLPEQAFYMVGPIEEAVA 518
Query: 72 KADTLAK 52
KAD LA+
Sbjct: 519 KADKLAE 525
>M19483-1|AAA51808.1| 529|Homo sapiens ATPSB protein.
Length = 529
Score = 154 bits (374), Expect = 2e-37
Identities = 81/104 (77%), Positives = 86/104 (82%), Gaps = 1/104 (0%)
Frame = -3
Query: 551 QAIYVPADDL-QILLRYHFCSLGCYH*LSRAIAELGIYPAVDPLDSTSRIMDPNIIGAEH 375
QAIYVPADDL F L LSRAIAELGIYPAVDPLDSTSRIMDPNI+G+EH
Sbjct: 358 QAIYVPADDLTDPAPATTFADLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVGSEH 417
Query: 374 YNVARGVQKILQDYKSLQDIIAILGMDELSEEDKLTVARAVKFR 243
Y+VARGVQKILQDYKSL DIIAILGMDELSEEDKLTV+RA K +
Sbjct: 418 YDVARGVQKILQDYKSLHDIIAILGMDELSEEDKLTVSRARKIQ 461
Score = 124 bits (299), Expect = 2e-28
Identities = 58/67 (86%), Positives = 62/67 (92%)
Frame = -2
Query: 252 KIQRFLSQPFQVAEVFTGHAGKLVPLEETIKGFSKILAGDYDHLPEVAFYMVGPIEEVVA 73
KIQRFLSQPFQVAEVFTGH GKLVPL+ETIKGF +ILAG+YDHLPE AFYMVGPIEE VA
Sbjct: 459 KIQRFLSQPFQVAEVFTGHMGKLVPLKETIKGFQQILAGEYDHLPEQAFYMVGPIEEAVA 518
Query: 72 KADTLAK 52
KAD LA+
Sbjct: 519 KADKLAE 525
>AY288421-1|AAP72130.1| 462|Homo sapiens G protein-coupled receptor
142 protein.
Length = 462
Score = 37.9 bits (84), Expect = 0.027
Identities = 31/73 (42%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Frame = -3
Query: 353 QKILQDYKSLQDIIAILGMDELSEEDKLTVARAVKFRGSSHNLSK*LRCSLDMRVN*YHL 174
QKI SLQDI A+LG + +EEDK V+ A K + S + S+ LR S + + L
Sbjct: 10 QKIQWVPTSLQDITAVLGTEAYTEEDKSMVSHAQKSQHSCLSHSRWLR-SPQVTGGSWDL 68
Query: 173 R-KLSKDSPKF*Q 138
R + SKDS F Q
Sbjct: 69 RIRPSKDSSSFRQ 81
>AB196530-1|BAD97441.1| 462|Homo sapiens G protein-coupled receptor
protein.
Length = 462
Score = 37.9 bits (84), Expect = 0.027
Identities = 31/73 (42%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Frame = -3
Query: 353 QKILQDYKSLQDIIAILGMDELSEEDKLTVARAVKFRGSSHNLSK*LRCSLDMRVN*YHL 174
QKI SLQDI A+LG + +EEDK V+ A K + S + S+ LR S + + L
Sbjct: 10 QKIQWVPTSLQDITAVLGTEAYTEEDKSMVSHAQKSQHSCLSHSRWLR-SPQVTGGSWDL 68
Query: 173 R-KLSKDSPKF*Q 138
R + SKDS F Q
Sbjct: 69 RIRPSKDSSSFRQ 81
>L09234-1|AAA35578.1| 615|Homo sapiens ATPase protein.
Length = 615
Score = 31.9 bits (69), Expect = 1.8
Identities = 25/84 (29%), Positives = 46/84 (54%), Gaps = 9/84 (10%)
Frame = -3
Query: 473 LSRAIAELGIYPAVDPLDSTSRIM-------DPNIIGAEHYNVARGVQKILQDYKSLQDI 315
L + +A+ +P+++ L S S+ M D N E + V++ILQ+ + L +I
Sbjct: 433 LDKKLAQRKHFPSINWLISYSKYMRALDDFYDKNF--PEFVPLRTKVKEILQEEEDLSEI 490
Query: 314 IAILGMDELSEEDKLT--VARAVK 249
+ ++G L+E DK+T VA+ +K
Sbjct: 491 VQLVGKASLAETDKITLEVAKLLK 514
>M60346-1|AAA35610.1| 406|Homo sapiens H+-ATPase B subunit protein.
Length = 406
Score = 30.7 bits (66), Expect = 4.1
Identities = 21/80 (26%), Positives = 39/80 (48%), Gaps = 4/80 (5%)
Frame = -3
Query: 473 LSRAIAELGIYPAVDPLDSTSRIMDPNI----IGAEHYNVARGVQKILQDYKSLQDIIAI 306
+ R + IYP ++ L S SR+M I +H +V+ + + K +Q + A+
Sbjct: 274 VDRQLHNRQIYPPINVLPSLSRLMKSAIGEGMTRKDHADVSNQLYRAYAIGKDVQAVKAV 333
Query: 305 LGMDELSEEDKLTVARAVKF 246
+G + L+ +D L + KF
Sbjct: 334 VGEEALTSDDLLYLEFLQKF 353
>L09235-1|AAA83249.1| 617|Homo sapiens ATPase protein.
Length = 617
Score = 30.3 bits (65), Expect = 5.4
Identities = 23/82 (28%), Positives = 46/82 (56%), Gaps = 7/82 (8%)
Frame = -3
Query: 473 LSRAIAELGIYPAVDPLDSTSRIMDP-NIIGAEHYN----VARGVQKILQDYKSLQDIIA 309
L + +A+ +P+V+ L S S+ M + +H+ + ++ILQ+ + L +I+
Sbjct: 435 LDKKLAQRKHFPSVNWLISYSKYMRALDEYYDKHFTEFVPLRTKAKEILQEEEDLAEIVQ 494
Query: 308 ILGMDELSEEDKLT--VARAVK 249
++G L+E DK+T VA+ +K
Sbjct: 495 LVGKASLAETDKITLEVAKLIK 516
>BT006672-1|AAP35318.1| 617|Homo sapiens ATPase, H+ transporting,
lysosomal 70kDa, V1 subunit A, isoform 1 protein.
Length = 617
Score = 30.3 bits (65), Expect = 5.4
Identities = 23/82 (28%), Positives = 46/82 (56%), Gaps = 7/82 (8%)
Frame = -3
Query: 473 LSRAIAELGIYPAVDPLDSTSRIMDP-NIIGAEHYN----VARGVQKILQDYKSLQDIIA 309
L + +A+ +P+V+ L S S+ M + +H+ + ++ILQ+ + L +I+
Sbjct: 435 LDKKLAQRKHFPSVNWLISYSKYMRALDEYYDKHFTEFVPLRTKAKEILQEEEDLAEIVQ 494
Query: 308 ILGMDELSEEDKLT--VARAVK 249
++G L+E DK+T VA+ +K
Sbjct: 495 LVGKASLAETDKITLEVAKLIK 516
>BC013138-1|AAH13138.1| 617|Homo sapiens ATPase, H+ transporting,
lysosomal 70kDa, V1 subunit A protein.
Length = 617
Score = 30.3 bits (65), Expect = 5.4
Identities = 23/82 (28%), Positives = 46/82 (56%), Gaps = 7/82 (8%)
Frame = -3
Query: 473 LSRAIAELGIYPAVDPLDSTSRIMDP-NIIGAEHYN----VARGVQKILQDYKSLQDIIA 309
L + +A+ +P+V+ L S S+ M + +H+ + ++ILQ+ + L +I+
Sbjct: 435 LDKKLAQRKHFPSVNWLISYSKYMRALDEYYDKHFTEFVPLRTKAKEILQEEEDLAEIVQ 494
Query: 308 ILGMDELSEEDKLT--VARAVK 249
++G L+E DK+T VA+ +K
Sbjct: 495 LVGKASLAETDKITLEVAKLIK 516
>AF113129-1|AAF14870.1| 617|Homo sapiens vacuolar ATPase isoform
VA68 protein.
Length = 617
Score = 30.3 bits (65), Expect = 5.4
Identities = 23/82 (28%), Positives = 46/82 (56%), Gaps = 7/82 (8%)
Frame = -3
Query: 473 LSRAIAELGIYPAVDPLDSTSRIMDP-NIIGAEHYN----VARGVQKILQDYKSLQDIIA 309
L + +A+ +P+V+ L S S+ M + +H+ + ++ILQ+ + L +I+
Sbjct: 435 LDKKLAQRKHFPSVNWLISYSKYMRALDEYYDKHFTEFVPLRTKAKEILQEEEDLAEIVQ 494
Query: 308 ILGMDELSEEDKLT--VARAVK 249
++G L+E DK+T VA+ +K
Sbjct: 495 LVGKASLAETDKITLEVAKLIK 516
>M25809-1|AAA36498.1| 511|Homo sapiens protein ( Human endomembrane
proton pump subunit mRNA, complete cds. ).
Length = 511
Score = 29.5 bits (63), Expect = 9.4
Identities = 22/80 (27%), Positives = 38/80 (47%), Gaps = 4/80 (5%)
Frame = -3
Query: 473 LSRAIAELGIYPAVDPLDSTSRIMDPNI----IGAEHYNVARGVQKILQDYKSLQDIIAI 306
+ R + IYP ++ L S SR+M I +H +V+ + K +Q + A+
Sbjct: 371 VDRQLHNRQIYPPINVLPSLSRLMKSAIGEGMTRKDHGDVSNQLYACYAIGKDVQAMKAV 430
Query: 305 LGMDELSEEDKLTVARAVKF 246
+G + L+ ED L + KF
Sbjct: 431 VGEEALTSEDLLYLEFLQKF 450
>BC063411-1|AAH63411.1| 513|Homo sapiens ATPase, H+ transporting,
lysosomal 56/58kDa, V1 subunit B1 (Renal tubular acido
protein.
Length = 513
Score = 29.5 bits (63), Expect = 9.4
Identities = 22/80 (27%), Positives = 38/80 (47%), Gaps = 4/80 (5%)
Frame = -3
Query: 473 LSRAIAELGIYPAVDPLDSTSRIMDPNI----IGAEHYNVARGVQKILQDYKSLQDIIAI 306
+ R + IYP ++ L S SR+M I +H +V+ + K +Q + A+
Sbjct: 373 VDRQLHNRQIYPPINVLPSLSRLMKSAIGEGMTRKDHGDVSNQLYACYAIGKDVQAMKAV 432
Query: 305 LGMDELSEEDKLTVARAVKF 246
+G + L+ ED L + KF
Sbjct: 433 VGEEALTSEDLLYLEFLQKF 452
>AK223151-1|BAD96871.1| 513|Homo sapiens ATPase, H+ transporting,
lysosomal 56/58kD, V1 subunit B, isoform 1 variant
protein.
Length = 513
Score = 29.5 bits (63), Expect = 9.4
Identities = 22/80 (27%), Positives = 38/80 (47%), Gaps = 4/80 (5%)
Frame = -3
Query: 473 LSRAIAELGIYPAVDPLDSTSRIMDPNI----IGAEHYNVARGVQKILQDYKSLQDIIAI 306
+ R + IYP ++ L S SR+M I +H +V+ + K +Q + A+
Sbjct: 373 VDRQLHNRQIYPPINVLPSLSRLMKSAIGEGMTRKDHGDVSNQLYACYAIGKDVQAMKAV 432
Query: 305 LGMDELSEEDKLTVARAVKF 246
+G + L+ ED L + KF
Sbjct: 433 VGEEALTSEDLLYLEFLQKF 452
>AF107478-1|AAD11943.1| 426|Homo sapiens H+-ATPase beta 1 subunit
protein.
Length = 426
Score = 29.5 bits (63), Expect = 9.4
Identities = 22/80 (27%), Positives = 38/80 (47%), Gaps = 4/80 (5%)
Frame = -3
Query: 473 LSRAIAELGIYPAVDPLDSTSRIMDPNI----IGAEHYNVARGVQKILQDYKSLQDIIAI 306
+ R + IYP ++ L S SR+M I +H +V+ + K +Q + A+
Sbjct: 337 VDRQLHNRQIYPPINVLPSLSRLMKSAIGEGMTRKDHGDVSNQLYACYAIGKDVQAMKAV 396
Query: 305 LGMDELSEEDKLTVARAVKF 246
+G + L+ ED L + KF
Sbjct: 397 VGEEALTSEDLLYLEFLQKF 416
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,471,358
Number of Sequences: 237096
Number of extensions: 2019896
Number of successful extensions: 4177
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 4016
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4163
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6268037466
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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