Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0297.Seq
         (598 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT011096-1|AAR82762.1|  464|Drosophila melanogaster RE30726p pro...   120   1e-27
BT001395-1|AAN71150.1|  371|Drosophila melanogaster GH05770p pro...   120   1e-27
AE014134-1857|AAS64675.1|  458|Drosophila melanogaster CG33303-P...   120   1e-27
DQ485790-1|ABF72146.1|  431|Drosophila melanogaster Cbl long iso...    28   8.4  
AF273749-1|AAG00952.1|  878|Drosophila melanogaster Cbl long iso...    28   8.4  
AE014296-1454|AAF50416.2|  878|Drosophila melanogaster CG7037-PB...    28   8.4  

>BT011096-1|AAR82762.1|  464|Drosophila melanogaster RE30726p
           protein.
          Length = 464

 Score =  120 bits (290), Expect = 1e-27
 Identities = 53/88 (60%), Positives = 69/88 (78%)
 Frame = -1

Query: 517 P*LEYLYHSGNEYLLKMRSIDHIFDDMQVDELVTKIILPEGSTGIKLNIPYSVTRLPDSL 338
           P  EY+++ GN+Y LKM  IDHI+D+M +DE   KIILPEGS+ I+L+ PYS++RLP+ L
Sbjct: 331 PSYEYMFNDGNKYQLKMHLIDHIYDNMAIDEATIKIILPEGSSDIRLSTPYSISRLPNEL 390

Query: 337 HFTYLDTKGRPVISFIKKNIVENHIQDF 254
             TYLDT GRPV+SF K N+VE+HI DF
Sbjct: 391 VHTYLDTIGRPVVSFSKSNLVESHISDF 418



 Score = 61.3 bits (142), Expect = 1e-09
 Identities = 32/65 (49%), Positives = 42/65 (64%)
 Frame = -3

Query: 311 SSSNLVYKEKHCGEPYPRFQIRYTFPRLLMLQEPLLVVGFLYTLFLCVIIYVRLDFSIHK 132
           S SNLV  E H  +    F + Y+F +  MLQEPLLV GF+Y +FL  I+++RLDFSI  
Sbjct: 406 SKSNLV--ESHISD----FTLHYSFSKTSMLQEPLLVSGFIYIIFLFTIVFLRLDFSITS 459

Query: 131 SEHKD 117
             HK+
Sbjct: 460 HAHKE 464



 Score = 41.1 bits (92), Expect = 0.001
 Identities = 15/24 (62%), Positives = 20/24 (83%)
 Frame = -3

Query: 596 DSVKLDLRPRYPLFXGWRTHYTLG 525
           D ++L+LRPR+ LF GW+T YTLG
Sbjct: 304 DFIELELRPRFTLFGGWKTQYTLG 327


>BT001395-1|AAN71150.1|  371|Drosophila melanogaster GH05770p
           protein.
          Length = 371

 Score =  120 bits (290), Expect = 1e-27
 Identities = 53/88 (60%), Positives = 69/88 (78%)
 Frame = -1

Query: 517 P*LEYLYHSGNEYLLKMRSIDHIFDDMQVDELVTKIILPEGSTGIKLNIPYSVTRLPDSL 338
           P  EY+++ GN+Y LKM  IDHI+D+M +DE   KIILPEGS+ I+L+ PYS++RLP+ L
Sbjct: 238 PSYEYMFNDGNKYQLKMHLIDHIYDNMAIDEATIKIILPEGSSDIRLSTPYSISRLPNEL 297

Query: 337 HFTYLDTKGRPVISFIKKNIVENHIQDF 254
             TYLDT GRPV+SF K N+VE+HI DF
Sbjct: 298 VHTYLDTIGRPVVSFSKSNLVESHISDF 325



 Score = 61.3 bits (142), Expect = 1e-09
 Identities = 32/65 (49%), Positives = 42/65 (64%)
 Frame = -3

Query: 311 SSSNLVYKEKHCGEPYPRFQIRYTFPRLLMLQEPLLVVGFLYTLFLCVIIYVRLDFSIHK 132
           S SNLV  E H  +    F + Y+F +  MLQEPLLV GF+Y +FL  I+++RLDFSI  
Sbjct: 313 SKSNLV--ESHISD----FTLHYSFSKTSMLQEPLLVSGFIYIIFLFTIVFLRLDFSITS 366

Query: 131 SEHKD 117
             HK+
Sbjct: 367 HAHKE 371



 Score = 44.4 bits (100), Expect = 1e-04
 Identities = 16/24 (66%), Positives = 21/24 (87%)
 Frame = -3

Query: 596 DSVKLDLRPRYPLFXGWRTHYTLG 525
           D ++L+LRPR+PLF GW+T YTLG
Sbjct: 211 DFIELELRPRFPLFGGWKTQYTLG 234


>AE014134-1857|AAS64675.1|  458|Drosophila melanogaster CG33303-PA
           protein.
          Length = 458

 Score =  120 bits (290), Expect = 1e-27
 Identities = 53/88 (60%), Positives = 69/88 (78%)
 Frame = -1

Query: 517 P*LEYLYHSGNEYLLKMRSIDHIFDDMQVDELVTKIILPEGSTGIKLNIPYSVTRLPDSL 338
           P  EY+++ GN+Y LKM  IDHI+D+M +DE   KIILPEGS+ I+L+ PYS++RLP+ L
Sbjct: 325 PSYEYMFNDGNKYQLKMHLIDHIYDNMAIDEATIKIILPEGSSDIRLSTPYSISRLPNEL 384

Query: 337 HFTYLDTKGRPVISFIKKNIVENHIQDF 254
             TYLDT GRPV+SF K N+VE+HI DF
Sbjct: 385 VHTYLDTIGRPVVSFSKSNLVESHISDF 412



 Score = 61.3 bits (142), Expect = 1e-09
 Identities = 32/65 (49%), Positives = 42/65 (64%)
 Frame = -3

Query: 311 SSSNLVYKEKHCGEPYPRFQIRYTFPRLLMLQEPLLVVGFLYTLFLCVIIYVRLDFSIHK 132
           S SNLV  E H  +    F + Y+F +  MLQEPLLV GF+Y +FL  I+++RLDFSI  
Sbjct: 400 SKSNLV--ESHISD----FTLHYSFSKTSMLQEPLLVSGFIYIIFLFTIVFLRLDFSITS 453

Query: 131 SEHKD 117
             HK+
Sbjct: 454 HAHKE 458



 Score = 44.4 bits (100), Expect = 1e-04
 Identities = 16/24 (66%), Positives = 21/24 (87%)
 Frame = -3

Query: 596 DSVKLDLRPRYPLFXGWRTHYTLG 525
           D ++L+LRPR+PLF GW+T YTLG
Sbjct: 298 DFIELELRPRFPLFGGWKTQYTLG 321


>DQ485790-1|ABF72146.1|  431|Drosophila melanogaster Cbl long
           isoform protein.
          Length = 431

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 19/49 (38%), Positives = 24/49 (48%)
 Frame = -3

Query: 341 SALHILRY*RSSSNLVYKEKHCGEPYPRFQIRYTFPRLLMLQEPLLVVG 195
           S+LH L    S+S+ V  EKH     PR   R T P L+ +Q  L   G
Sbjct: 10  SSLHAL----STSSTVAAEKHSPHTSPRLGRRSTTPSLMAVQNDLYAGG 54


>AF273749-1|AAG00952.1|  878|Drosophila melanogaster Cbl long
           isoform protein.
          Length = 878

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 19/49 (38%), Positives = 24/49 (48%)
 Frame = -3

Query: 341 SALHILRY*RSSSNLVYKEKHCGEPYPRFQIRYTFPRLLMLQEPLLVVG 195
           S+LH L    S+S+ V  EKH     PR   R T P L+ +Q  L   G
Sbjct: 457 SSLHAL----STSSTVAAEKHSPHTSPRLGRRSTTPSLMAVQNDLYAGG 501


>AE014296-1454|AAF50416.2|  878|Drosophila melanogaster CG7037-PB,
           isoform B protein.
          Length = 878

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 19/49 (38%), Positives = 24/49 (48%)
 Frame = -3

Query: 341 SALHILRY*RSSSNLVYKEKHCGEPYPRFQIRYTFPRLLMLQEPLLVVG 195
           S+LH L    S+S+ V  EKH     PR   R T P L+ +Q  L   G
Sbjct: 457 SSLHAL----STSSTVAAEKHSPHTSPRLGRRSTTPSLMAVQNDLYAGG 501


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,145,090
Number of Sequences: 53049
Number of extensions: 529697
Number of successful extensions: 1698
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1674
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1698
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2420893683
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)